RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 KIF17Q9P2E2 1029 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 MKLN1Q9UL63 735 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 IFT52Q9Y366 437 aa14.45□□□□□ -0.1
LSM6-201ENST00000296581 ARRDC5A6NEK1 342 aa14.44□□□□□ -0.1
LSM6-201ENST00000296581 PRAMEF2O60811 474 aa14.44□□□□□ -0.1
LSM6-201ENST00000296581 STX11O75558 287 aa14.44□□□□□ -0.1
LSM6-201ENST00000296581 GUSBP08236 651 aa14.44□□□□□ -0.1
LSM6-201ENST00000296581 RPS4Y1P22090 263 aaKnown RBP14.44□□□□□ -0.1
LSM6-201ENST00000296581 GABRA3P34903 492 aa14.44□□□□□ -0.1
LSM6-201ENST00000296581 POU6F2P78424 691 aaPredicted RBP14.44□□□□□ -0.1
LSM6-201ENST00000296581 PSG6Q00889 435 aa14.44□□□□□ -0.1
LSM6-201ENST00000296581 CCNJQ5T5M9 372 aa14.44□□□□□ -0.1
LSM6-201ENST00000296581 ARHGAP40Q5TG30 622 aa14.44□□□□□ -0.1
LSM6-201ENST00000296581 BPHLQ86WA6 291 aaPredicted RBP14.44□□□□□ -0.1
LSM6-201ENST00000296581 ZNF619Q8N2I2 560 aa14.44□□□□□ -0.1
LSM6-201ENST00000296581 OR6T1Q8NGN1 323 aa14.44□□□□□ -0.1
LSM6-201ENST00000296581 MUS81Q96NY9 551 aa14.44□□□□□ -0.1
LSM6-201ENST00000296581 OR6C1Q96RD1 312 aa14.44□□□□□ -0.1
LSM6-201ENST00000296581 NMNAT1Q9HAN9 279 aaPredicted RBP14.44□□□□□ -0.1
LSM6-201ENST00000296581 MKKSQ9NPJ1 570 aaPredicted RBP14.44□□□□□ -0.1
LSM6-201ENST00000296581 A4GNTQ9UNA3 340 aa14.44□□□□□ -0.1
LSM6-201ENST00000296581 AGAP5A6NIR3 686 aa14.44□□□□□ -0.1
LSM6-201ENST00000296581 H3BNH8 94 aa14.44□□□□□ -0.1
LSM6-201ENST00000296581 PCDH17O14917 1159 aa14.44□□□□□ -0.1
LSM6-201ENST00000296581 KIAA0513O60268 411 aa14.44□□□□□ -0.1
LSM6-201ENST00000296581 IFNA16P05015 189 aa14.44□□□□□ -0.1
LSM6-201ENST00000296581 THBS1P07996 1170 aa14.44□□□□□ -0.1
LSM6-201ENST00000296581 ANXA8P13928 327 aa14.44□□□□□ -0.1
LSM6-201ENST00000296581 RCVRNP35243 200 aa14.44□□□□□ -0.1
LSM6-201ENST00000296581 GRK6P43250 576 aa14.44□□□□□ -0.1
LSM6-201ENST00000296581 RHAGQ02094 409 aa14.44□□□□□ -0.1
LSM6-201ENST00000296581 C1orf189Q5VU69 101 aa14.44□□□□□ -0.1
LSM6-201ENST00000296581 SLC5A8Q8N695 610 aa14.44□□□□□ -0.1
LSM6-201ENST00000296581 ZNF615Q8N8J6 731 aa14.44□□□□□ -0.1
LSM6-201ENST00000296581 PHF10Q8WUB8 498 aaKnown RBP14.44□□□□□ -0.1
LSM6-201ENST00000296581 TMIGD2Q96BF3 282 aa14.44□□□□□ -0.1
LSM6-201ENST00000296581 FEVQ99581 238 aa14.44□□□□□ -0.1
LSM6-201ENST00000296581 KRT84Q9NSB2 600 aa14.44□□□□□ -0.1
LSM6-201ENST00000296581 RHCGQ9UBD6 479 aa14.44□□□□□ -0.1
LSM6-201ENST00000296581 RABL2AQ9UBK7 228 aaPredicted RBP14.44□□□□□ -0.1
LSM6-201ENST00000296581 RARRES3Q9UL19 164 aa14.44□□□□□ -0.1
LSM6-201ENST00000296581 ERVK-19Q9WJR5 959 aa14.44□□□□□ -0.1
LSM6-201ENST00000296581 ZNF443Q9Y2A4 671 aaPredicted RBP14.44□□□□□ -0.1
LSM6-201ENST00000296581 COL5A1P20908 1838 aaPredicted RBP14.43□□□□□ -0.1
LSM6-201ENST00000296581 LOC100130705A0A1B0GUX0 176 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 GXYLT2A0PJZ3 443 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 ANKRD34BA5PLL1 514 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 D6RAR5 112 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 E9PQ18 207 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 CCNB2O95067 398 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 CLPSP04118 112 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 ZNHIT3Q15649 155 aaPredicted RBP14.43□□□□□ -0.1
LSM6-201ENST00000296581 NPTX1Q15818 432 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 GALNT5Q7Z7M9 940 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 PTPMT1Q8WUK0 201 aaPredicted RBP14.43□□□□□ -0.1
LSM6-201ENST00000296581 FKBP10Q96AY3 582 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 RMND5BQ96G75 393 aaPredicted RBP14.43□□□□□ -0.1
LSM6-201ENST00000296581 ALPK1Q96QP1 1244 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 CNPPD1Q9BV87 410 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 OR10A5Q9H207 317 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 SLC22A11Q9NSA0 550 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 FBXO34Q9NWN3 711 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 MYRFQ9Y2G1 1151 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 HCN4Q9Y3Q4 1203 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 ASCC3Q8N3C0 2202 aaKnown RBP14.43□□□□□ -0.1
LSM6-201ENST00000296581 TCRBV16S1A1N1A0A5B0 115 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 BRINP1O60477 761 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 TPPPO94811 219 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 H1F0P07305 194 aaKnown RBP14.43□□□□□ -0.1
LSM6-201ENST00000296581 RORAP35398 523 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 POLR2IP36954 125 aaKnown RBP14.43□□□□□ -0.1
LSM6-201ENST00000296581 ALDH3B2P48448 385 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 PCYT1AP49585 367 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 EFNA3P52797 238 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 SMIM11AP58511 58 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 IL18R1Q13478 541 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 TRA2AQ13595 282 aaKnown RBP eCLIP14.43□□□□□ -0.1
LSM6-201ENST00000296581 KCNJ8Q15842 424 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 VWA2Q5GFL6 755 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 COX15Q7KZN9 410 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 TMCO5AQ8N6Q1 288 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 OR7G1Q8NGA0 311 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 TSLPQ969D9 159 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 PRRC1Q96M27 445 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 CTRCQ99895 268 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 FUZQ9BT04 418 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 CENPOQ9BU64 300 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 RLIMQ9NVW2 624 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 SLC13A4Q9UKG4 626 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 DTX4Q9Y2E6 619 aa14.43□□□□□ -0.1
LSM6-201ENST00000296581 GPR55Q9Y2T6 319 aaPredicted RBP14.43□□□□□ -0.1
LSM6-201ENST00000296581 IGLV3-12A0A075B6K2 115 aa14.42□□□□□ -0.1
LSM6-201ENST00000296581 C17orf105B2RV13 164 aa14.42□□□□□ -0.1
LSM6-201ENST00000296581 UGT2B11O75310 529 aa14.42□□□□□ -0.1
LSM6-201ENST00000296581 SULT1C4O75897 302 aa14.42□□□□□ -0.1
LSM6-201ENST00000296581 KCNK2O95069 426 aa14.42□□□□□ -0.1
LSM6-201ENST00000296581 TIAF1O95411 115 aa14.42□□□□□ -0.1
LSM6-201ENST00000296581 DBIP07108 87 aaKnown RBP14.42□□□□□ -0.1
LSM6-201ENST00000296581 GP1BAP07359 652 aa14.42□□□□□ -0.1
LSM6-201ENST00000296581 TNNI3P19429 210 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms