RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 RAD1O60671 282 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 C1orf105O95561 183 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 FNTBP49356 437 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 DAP3P51398 398 aaKnown RBP16.32■□□□□ 0.2
SHANK1-201ENST00000293441 PLGLAQ15195 96 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 ZNF791Q3KP31 576 aaPredicted RBP16.32■□□□□ 0.2
SHANK1-201ENST00000293441 DCST2Q5T1A1 773 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 TANGO2Q6ICL3 276 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 METTL2BQ6P1Q9 378 aaKnown RBP16.32■□□□□ 0.2
SHANK1-201ENST00000293441 TMEM184AQ6ZMB5 413 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 VASH1Q7L8A9 365 aaPredicted RBP16.32■□□□□ 0.2
SHANK1-201ENST00000293441 CNEP1R1Q8N9A8 125 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 OR9K2Q8NGE7 335 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 CAMK2AQ9UQM7 478 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 FRS3O43559 492 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 PRPS1P60891 318 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 NFATC4Q14934 902 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 CST9Q5W186 159 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 ZC3H10Q96K80 434 aaKnown RBP16.32■□□□□ 0.2
SHANK1-201ENST00000293441 GSTO2Q9H4Y5 243 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 NMNAT1Q9HAN9 279 aaPredicted RBP16.32■□□□□ 0.2
SHANK1-201ENST00000293441 TMEM165Q9HC07 324 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 MCTS1Q9ULC4 181 aaKnown RBP16.32■□□□□ 0.2
SHANK1-201ENST00000293441 CLCA1A8K7I4 914 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 GCH1P30793 250 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 CCR7P32248 378 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 MRPS21P82921 87 aaKnown RBP16.32■□□□□ 0.2
SHANK1-201ENST00000293441 PIN1Q13526 163 aaPredicted RBP16.32■□□□□ 0.2
SHANK1-201ENST00000293441 MPP7Q5T2T1 576 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 NADSYN1Q6IA69 706 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 MRPL21Q7Z2W9 205 aaKnown RBP16.32■□□□□ 0.2
SHANK1-201ENST00000293441 CREB3L1Q96BA8 519 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 TOX2Q96NM4 488 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 ULBP3Q9BZM4 244 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 MMP27Q9H306 513 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 MAN2C1Q9NTJ4 1040 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 RIMS3Q9UJD0 308 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 UBE2J1Q9Y385 318 aaPredicted RBP16.32■□□□□ 0.2
SHANK1-201ENST00000293441 FBP2O00757 339 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 CST5P28325 142 aaPredicted RBP16.32■□□□□ 0.2
SHANK1-201ENST00000293441 HOXD9P28356 352 aaPredicted RBP16.32■□□□□ 0.2
SHANK1-201ENST00000293441 PIAS4Q8N2W9 510 aaPredicted RBP16.32■□□□□ 0.2
SHANK1-201ENST00000293441 SYNPOQ8N3V7 929 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 PINK1Q9BXM7 581 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 ACTR6Q9GZN1 396 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 MYH9P35579 1960 aaKnown RBP16.32■□□□□ 0.2
SHANK1-201ENST00000293441 C1SP09871 688 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 AKR1C4P17516 323 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 ITGB8P26012 769 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 ZNF33BQ06732 778 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 TBC1D15Q8TC07 691 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 MCOLN1Q9GZU1 580 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 ENPP4Q9Y6X5 453 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 TOPAZ1Q8N9V7 1692 aa16.32■□□□□ 0.2
SHANK1-201ENST00000293441 PPP1R3BQ86XI6 285 aa16.31■□□□□ 0.2
SHANK1-201ENST00000293441 MFSD6LQ8IWD5 586 aa16.31■□□□□ 0.2
SHANK1-201ENST00000293441 CDC14CA4D256 554 aa16.31■□□□□ 0.2
SHANK1-201ENST00000293441 TTLL8A6PVC2 850 aa16.31■□□□□ 0.2
SHANK1-201ENST00000293441 INMT-MINDY4F8WBC2 141 aa16.31■□□□□ 0.2
SHANK1-201ENST00000293441 MITFO75030 526 aaPredicted RBP16.31■□□□□ 0.2
SHANK1-201ENST00000293441 NDUFB2O95178 105 aa16.31■□□□□ 0.2
SHANK1-201ENST00000293441 BMP1P13497 986 aa16.31■□□□□ 0.2
SHANK1-201ENST00000293441 SF3B4Q15427 424 aaKnown RBP eCLIP16.31■□□□□ 0.2
SHANK1-201ENST00000293441 C3orf38Q5JPI3 329 aa16.31■□□□□ 0.2
SHANK1-201ENST00000293441 ZNF576Q9H609 170 aa16.31■□□□□ 0.2
SHANK1-201ENST00000293441 TIMM8BQ9Y5J9 83 aaPredicted RBP16.31■□□□□ 0.2
SHANK1-201ENST00000293441 ANKRD28O15084 1053 aa16.31■□□□□ 0.2
SHANK1-201ENST00000293441 PITPNBP48739 271 aa16.31■□□□□ 0.2
SHANK1-201ENST00000293441 NKX3-2P78367 333 aa16.31■□□□□ 0.2
SHANK1-201ENST00000293441 ZNF423Q2M1K9 1284 aa16.31■□□□□ 0.2
SHANK1-201ENST00000293441 OR5M10Q6IEU7 315 aa16.31■□□□□ 0.2
SHANK1-201ENST00000293441 CYB561A3Q8NBI2 242 aa16.31■□□□□ 0.2
SHANK1-201ENST00000293441 NSG1A0A0A6YYJ2 146 aa16.31■□□□□ 0.2
SHANK1-201ENST00000293441 OTOL1A6NHN0 477 aaPredicted RBP16.31■□□□□ 0.2
SHANK1-201ENST00000293441 TMX2-CTNND1H3BSU7 103 aa16.31■□□□□ 0.2
SHANK1-201ENST00000293441 RNASET2O00584 256 aaKnown RBP16.31■□□□□ 0.2
SHANK1-201ENST00000293441 SNNO75324 88 aaPredicted RBP16.31■□□□□ 0.2
SHANK1-201ENST00000293441 ART1P52961 327 aa16.31■□□□□ 0.2
SHANK1-201ENST00000293441 ZNF45Q02386 682 aa16.31■□□□□ 0.2
SHANK1-201ENST00000293441 MICAQ29983 383 aa16.31■□□□□ 0.2
SHANK1-201ENST00000293441 PTCRAQ6ISU1 281 aaPredicted RBP16.31■□□□□ 0.2
SHANK1-201ENST00000293441 CXXC1Q9P0U4 656 aaPredicted RBP16.31■□□□□ 0.2
SHANK1-201ENST00000293441 ANTXRLA6NF34 631 aa16.31■□□□□ 0.2
SHANK1-201ENST00000293441 NOVP48745 357 aa16.31■□□□□ 0.2
SHANK1-201ENST00000293441 MELKQ14680 651 aa16.31■□□□□ 0.2
SHANK1-201ENST00000293441 OSMP13725 252 aa16.3■□□□□ 0.2
SHANK1-201ENST00000293441 TAP2Q03519 686 aa16.3■□□□□ 0.2
SHANK1-201ENST00000293441 UGT2A3Q6UWM9 527 aa16.3■□□□□ 0.2
SHANK1-201ENST00000293441 OR51T1Q8NGJ9 327 aa16.3■□□□□ 0.2
SHANK1-201ENST00000293441 ADOQ96SZ5 270 aa16.3■□□□□ 0.2
SHANK1-201ENST00000293441 HIF3AQ9Y2N7 669 aa16.3■□□□□ 0.2
SHANK1-201ENST00000293441 ADAP00813 363 aa16.3■□□□□ 0.2
SHANK1-201ENST00000293441 FUT1P19526 365 aa16.3■□□□□ 0.2
SHANK1-201ENST00000293441 MAGEA3P43357 314 aa16.3■□□□□ 0.2
SHANK1-201ENST00000293441 PRKXP51817 358 aa16.3■□□□□ 0.2
SHANK1-201ENST00000293441 MFSD13AQ14CX5 517 aa16.3■□□□□ 0.2
SHANK1-201ENST00000293441 HES5Q5TA89 166 aa16.3■□□□□ 0.2
SHANK1-201ENST00000293441 SDR9C7Q8NEX9 313 aa16.3■□□□□ 0.2
SHANK1-201ENST00000293441 ZMYND19Q96E35 227 aaPredicted RBP16.3■□□□□ 0.2
SHANK1-201ENST00000293441 GALNT1Q10472 559 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms