RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 KLK1P06870 262 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 ZNF3P17036 446 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 ATP5A1P25705 553 aaKnown RBP10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 HK3P52790 923 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 OR4D1Q15615 310 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 TMEM69Q5SWH9 247 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 LARP4Q71RC2 724 aaKnown RBP eCLIP10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 SLC29A4Q7RTT9 530 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 MFSD8Q8NHS3 518 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 CNOT9Q92600 299 aaKnown RBP10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 FYTTD1Q96QD9 318 aaKnown RBP10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 CD244Q9BZW8 370 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 ASF1BQ9NVP2 202 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 MARCH4Q9P2E8 410 aaPredicted RBP10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 ACTL7AQ9Y615 435 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 ITPKBP27987 946 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 FOXA1P55317 472 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 ST3GAL3Q11203 375 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 PCBP2Q15366 365 aaKnown RBP eCLIP10.75□□□□□ -0.694e-6■■■■□ 23.2
NPC1L1-201ENST00000289547 TBCEQ15813 527 aaPredicted RBP10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 SPIN4Q56A73 249 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 HSD11B1LQ7Z5J1 315 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 RETREG3Q86VR2 466 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 RHBDF1Q96CC6 855 aa10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 PNO1Q9NRX1 252 aaKnown RBP10.75□□□□□ -0.69
NPC1L1-201ENST00000289547 TPPPO94811 219 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 TACSTD2P09758 323 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 RPS15AP62244 130 aaKnown RBP10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 ARFRP1Q13795 201 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 GK2Q14410 553 aaPredicted RBP10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 PLAG1Q6DJT9 500 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 Q6ZNB5 142 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 CREB3L2Q70SY1 520 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 C1orf210Q8IVY1 113 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 TP53INP2Q8IXH6 220 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 PNPLA1Q8N8W4 532 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 B3GNT7Q8NFL0 401 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 SLC7A6Q92536 515 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 VN1R3Q9BXE9 311 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 TMEM9BQ9NQ34 198 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 OR6C2Q9NZP2 312 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 IL17CQ9P0M4 197 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 GNG8Q9UK08 70 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 PLAGL1Q9UM63 463 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 MED31Q9Y3C7 131 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 A0A0G2JMP0 313 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 FABP7O15540 132 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 TNFRSF1BP20333 461 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 FBLP22087 321 aaKnown RBP10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 ACVR1BP36896 505 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 RAB28P51157 221 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 SGSHP51688 502 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 VLDLRP98155 873 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 TMIGD1Q6UXZ0 262 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 RANBP10Q6VN20 620 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 GRAMD2AQ8IUY3 354 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 OR4M2Q8NGB6 313 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 C3orf30Q96M34 536 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 NT5DC2Q9H857 520 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 CACNG2Q9Y698 323 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 KRT33AO76009 404 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 SCGB1D2O95969 90 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 MRPL3P09001 348 aaKnown RBP10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 JUNBP17275 347 aaPredicted RBP10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 PTNP21246 168 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 PYCR1P32322 319 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 GRM7Q14831 915 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 ADAMTS18Q8TE60 1221 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 PMM1Q92871 262 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 L3HYPDHQ96EM0 354 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 NIPAL2Q9H841 368 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 CNTRLQ7Z7A1 2325 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 LOC285095A0A1B0GVY8 99 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 KRBOX1C9JBD0 128 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 RCBTB2O95199 551 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 IGLV3-27P01718 113 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 IGFBP6P24592 240 aaPredicted RBP10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 MPIP34949 423 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 GRK6P43250 576 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 SOX2P48431 317 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 PRKXP51817 358 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 RCAN2Q14206 197 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 SHFQ7M4L6 423 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 ARL14Q8N4G2 192 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 DTWD2Q8NBA8 298 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 ZNF563Q8TA94 476 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 ZNF649Q9BS31 505 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 MFFQ9GZY8 342 aa10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 DCAF13Q9NV06 445 aaKnown RBP10.74□□□□□ -0.69
NPC1L1-201ENST00000289547 A0A1B0GVT2 93 aa10.73□□□□□ -0.69
NPC1L1-201ENST00000289547 POLR1CO15160 346 aaPredicted RBP10.73□□□□□ -0.69
NPC1L1-201ENST00000289547 IFNA21P01568 189 aa10.73□□□□□ -0.69
NPC1L1-201ENST00000289547 CCKBRP32239 447 aa10.73□□□□□ -0.69
NPC1L1-201ENST00000289547 DDOSTP39656 456 aa10.73□□□□□ -0.69
NPC1L1-201ENST00000289547 NCBP2P52298 156 aaKnown RBP eCLIP10.73□□□□□ -0.69
NPC1L1-201ENST00000289547 POU6F2P78424 691 aaPredicted RBP10.73□□□□□ -0.69
NPC1L1-201ENST00000289547 ELOAQ14241 798 aaKnown RBP10.73□□□□□ -0.69
NPC1L1-201ENST00000289547 TMEM184AQ6ZMB5 413 aa10.73□□□□□ -0.69
NPC1L1-201ENST00000289547 ASPGQ86U10 573 aa10.73□□□□□ -0.69
NPC1L1-201ENST00000289547 SGCDQ92629 289 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms