RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 NFYAP23511 347 aaPredicted RBP16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 CHATP28329 748 aa16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 TMEM115Q12893 351 aaPredicted RBP16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 DECR1Q16698 335 aa16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 SLC6A19Q695T7 634 aa16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 SCARB1Q8WTV0 552 aa16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 PRRC1Q96M27 445 aa16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 NOX3Q9HBY0 568 aa16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 SMCO3A2RU48 225 aa16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 ARHGAP33O14559 1287 aa16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 CACNG3O60359 315 aa16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 KCNJ13O60928 360 aa16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 BMPR1AP36894 532 aa16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 FXYD6P3P58550 94 aa16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 TMEM41AQ96HV5 264 aa16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 ZNF587Q96SQ5 575 aaPredicted RBP16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 NME7Q9Y5B8 376 aa16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 HEMK1Q9Y5R4 338 aaPredicted RBP16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 TMEM189-UBE2V1I3L0A0 370 aa16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 TM4SF4P48230 202 aa16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 GGTA1PQ4G0N0 100 aa16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 RTP2Q5QGT7 225 aa16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 HENMT1Q5T8I9 393 aaKnown RBP16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 FAM205BPQ63HN1 556 aa16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 SLC51BQ86UW2 128 aa16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 ARHGAP12Q8IWW6 846 aa16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 KLHDC7BQ96G42 594 aa16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 SLC41A3Q96GZ6 507 aa16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 POLDIP3Q9BY77 421 aaKnown RBP16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 ASIC5Q9NY37 505 aa16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 ADAMTS7Q9UKP4 1686 aa16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 NPIPA5E9PKD4 350 aa16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 ARF3P61204 181 aaPredicted RBP16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 ARF1P84077 181 aaKnown RBP16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 PCGF3Q3KNV8 242 aa16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 FAM83FQ8NEG4 500 aaPredicted RBP16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 CD200R1Q8TD46 325 aa16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 PHYHIPQ92561 330 aa16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 UBXN10Q96LJ8 280 aa16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 DGAT2Q96PD7 388 aa16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 GAL3ST1Q99999 423 aa16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 FAM86C1Q9NVL1 165 aa16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 NPIPA1Q9UND3 350 aa16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 DIMT1Q9UNQ2 313 aaKnown RBP16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 NUMBLQ9Y6R0 609 aa16.57■□□□□ 0.24
PCDHA13-201ENST00000289272 SSX5O60225 188 aa16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 AMY2AP04746 511 aa16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 SLC22A15Q8IZD6 547 aa16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 FBXO15Q8NCQ5 510 aaPredicted RBP16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 AP1S3Q96PC3 154 aa16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 NANSQ9NR45 359 aa16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 B4DGG1 531 aa16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 CFIP05156 583 aa16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 CTSAP10619 480 aa16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 DRD5P21918 477 aa16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 CST5P28325 142 aaPredicted RBP16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 CCDC54Q8NEL0 328 aa16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 OR4K14Q8NGD5 310 aa16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 INPP5KQ9BT40 448 aa16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 PELI2Q9HAT8 420 aa16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 CSNK1G1Q9HCP0 422 aa16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 OR2S2Q9NQN1 319 aa16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 C19orf25Q9UFG5 118 aaPredicted RBP16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 FBXL3Q9UKT7 428 aa16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 GPRIN2O60269 458 aa16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 UBL3O95164 117 aa16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 TIMP1P01033 207 aa16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 LAMP1P11279 417 aa16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 KCNC1P48547 511 aa16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 DUSP3P51452 185 aaPredicted RBP16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 ELAVL3Q14576 367 aaKnown RBP16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 NXPE4Q6UWF7 544 aa16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 ZNF534Q76KX8 674 aa16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 FOXRED2Q8IWF2 684 aa16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 CELF2-AS1Q8N7Q2 184 aa16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 C3orf58Q8NDZ4 430 aa16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 OR9Q2Q8NGE9 314 aa16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 C16orf78Q8WTQ4 265 aa16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 NTN4Q9HB63 628 aa16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 FANCFQ9NPI8 374 aa16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 GBAP04062 536 aa16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 ACVR1BP36896 505 aa16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 PTH2RP49190 550 aa16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 SSX2Q16385 188 aa16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 NUP43Q8NFH3 380 aa16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 GIMAP5Q96F15 307 aa16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 APMAPQ9HDC9 416 aa16.56■□□□□ 0.24
PCDHA13-201ENST00000289272 C2orf78A6NCI8 922 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 PRSS44E7EML9 344 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 MRPL3P09001 348 aaKnown RBP16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 DHCR24Q15392 516 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 KIAA1211LQ6NV74 962 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 TMEM150AQ86TG1 271 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 ASB13Q8WXK3 278 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 SCAMP4Q969E2 229 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 PNPLA2Q96AD5 504 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 NELFAQ9H3P2 528 aa16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 MTHFD2LQ9H903 347 aaPredicted RBP16.55■□□□□ 0.24
PCDHA13-201ENST00000289272 NHSL1Q5SYE7 1610 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms