RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 OR2Y1Q8NGV0 311 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 ASB9Q96DX5 294 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 SPATA5L1Q9BVQ7 753 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 CXorf21Q9HAI6 301 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 CMTM6Q9NX76 183 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 SMIM31A0A1B0GVY4 71 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 SAGE2PA6NJ88 616 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 CLIC1O00299 241 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 RRP8O43159 456 aaKnown RBP7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 AK1P00568 194 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 FOLR3P41439 243 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 CCT3P49368 545 aaKnown RBP7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 DUSP2Q05923 314 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 RGNQ15493 299 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 PROSER1Q86XN7 944 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 TMEM151BQ8IW70 566 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 ULK2Q8IYT8 1036 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 EID3Q8N140 333 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 PHOSPHO1Q8TCT1 267 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 NUDT8Q8WV74 236 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 DAZLQ92904 295 aaKnown RBP7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 GIMAP5Q96F15 307 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 HIST1H2AAQ96QV6 131 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 ZNF607Q96SK3 696 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 ZNF700Q9H0M5 742 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 C5AR2Q9P296 337 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 PADI1Q9ULC6 663 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 LOC100506127A0A0U1RQW1 187 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 CDK2AP1O14519 115 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 LDB3O75112 727 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 CLPSP04118 112 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 CBLP22681 906 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 FASP25445 335 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 TALDO1P37837 337 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 CDK9P50750 372 aaKnown RBP7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 CAMK2BQ13554 666 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 LARS2Q15031 903 aaKnown RBP7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 NUP54Q7Z3B4 507 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 DHFR2Q86XF0 187 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 HPS6Q86YV9 775 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 ZDHHC13Q8IUH4 622 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 OR8K3Q8NH51 312 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 SNIP1Q8TAD8 396 aaKnown RBP7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 RIT1Q92963 219 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 SLC35G5Q96KT7 338 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 IP6K3Q96PC2 410 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 ASCL3Q9NQ33 180 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 POLE3Q9NRF9 147 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 SLC6A13Q9NSD5 602 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 GPATCH2Q9NW75 528 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 MAGEL2Q9UJ55 1249 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 CLEC4AQ9UMR7 237 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 A0A075B6Q4 140 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 NME4O00746 187 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 RAD1O60671 282 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 S1PR1P21453 382 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 FUT4P22083 530 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 LCN1P31025 176 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 SLC5A2P31639 672 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 MVDP53602 400 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 DCAF7P61962 342 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 VEZF1Q14119 521 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 CDC73Q6P1J9 531 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 ZNF730Q6ZMV8 503 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 CCDC80Q76M96 950 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 PACS2Q86VP3 889 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 CCDC116Q8IYX3 515 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 VWA5B2Q8N398 1253 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 DTWD1Q8N5C7 304 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 CT55Q8WUE5 264 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 ACTRT3Q9BYD9 372 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 SEMA4CQ9C0C4 833 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 PLEKHA1Q9HB21 404 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 SLAMF8Q9P0V8 285 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 PRODH2Q9UF12 536 aa7.84□□□□□ -1.15
PTPDC1-201ENST00000288976 ZNF407Q9C0G0 2248 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 DUXAA6NLW8 204 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 ZNF726A6NNF4 738 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 MYL12BO14950 172 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 PEX14O75381 377 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 TNFRSF21O75509 655 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 OR5F1O95221 314 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 MAOAP21397 527 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 SOX6P35712 828 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 PLA2G5P39877 138 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 MAP3K8P41279 467 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 MAN2A2P49641 1150 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 ST13P50502 369 aaKnown RBP7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 SPIBQ01892 262 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 PUM1Q14671 1186 aaKnown RBP eCLIP7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 RCN1Q15293 331 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 ABHD17BQ5VST6 288 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 TMEM107Q6UX40 140 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 RASSF6Q6ZTQ3 369 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 EIF3MQ7L2H7 374 aaKnown RBP7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 DTX1Q86Y01 620 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 ZNF433Q8N7K0 673 aaPredicted RBP7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 BOLLQ8N9W6 283 aaKnown RBP7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 PTPMT1Q8WUK0 201 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms