RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 HSPB3Q12988 150 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 SLC10A1Q14973 349 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 DUSP5Q16690 384 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 LSM12Q3MHD2 195 aaKnown RBP8.35□□□□□ -1.07
HMGN1-201ENST00000288344 NHSL2Q5HYW2 709 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 HLA-DQA1Q5Y7H0 255 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 TMEM198Q66K66 360 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 RTL6Q6ICC9 239 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 OR4F3Q6IEY1 312 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 SPATA19Q7Z5L4 167 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 SLC22A16Q86VW1 577 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 FUNDC1Q8IVP5 155 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 SLC44A2Q8IWA5 706 aaPredicted RBP8.35□□□□□ -1.07
HMGN1-201ENST00000288344 CLECL1Q8IZS7 167 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 FADS6Q8N9I5 356 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 FAM13CQ8NE31 585 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 NUP43Q8NFH3 380 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 OR5M3Q8NGP4 307 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 OR4C3Q8NH37 302 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 CEP70Q8NHQ1 597 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 CDC26Q8NHZ8 85 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 FAM57AQ8TBR7 257 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 MIPOL1Q8TD10 442 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 SSC4DQ8WTU2 575 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 DUSP26Q9BV47 211 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 GALNT9Q9HCQ5 603 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 SPRR3Q9UBC9 169 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 TINAGQ9UJW2 476 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 CBLCQ9ULV8 474 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 C15orf41Q9Y2V0 281 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 PCDHGB3Q9Y5G1 929 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 APCP25054 2843 aa8.35□□□□□ -1.07
HMGN1-201ENST00000288344 CACNA1CQ13936 2221 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 HEATR5AQ86XA9 2040 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 CSMD1Q96PZ7 3565 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 A0A1B0GUH1 482 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 PRSS51A0A1B0GVH4 220 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 OR14I1A6ND48 311 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 FAM166BA8MTA8 275 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 PDE9AO76083 593 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 KCNK2O95069 426 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 TGDSO95455 350 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 GUSBP08236 651 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 HPCAL1P37235 193 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 CCT3P49368 545 aaKnown RBP8.34□□□□□ -1.07
HMGN1-201ENST00000288344 TMED10P49755 219 aaKnown RBP8.34□□□□□ -1.07
HMGN1-201ENST00000288344 MVDP53602 400 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 GFRA1P56159 465 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 B3GALT5-AS1P59052 145 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 PRR5P85299 388 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.34□□□□□ -1.07
HMGN1-201ENST00000288344 TMEM44Q2T9K0 475 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 GXYLT1Q4G148 440 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 SPANXN4Q5MJ08 99 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 C1QL3Q5VWW1 255 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 VASNQ6EMK4 673 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 ARHGAP11AQ6P4F7 1023 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 SEM1Q6ZVN7 128 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 CDRT4Q8N9R6 151 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 NEIL3Q8TAT5 605 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 ITLN2Q8WWU7 325 aaPredicted RBP8.34□□□□□ -1.07
HMGN1-201ENST00000288344 PIK3R3Q92569 461 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 ZNF524Q96C55 264 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 CCDC120Q96HB5 630 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 MAGEB18Q96M61 343 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 CCDC115Q96NT0 180 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 STACQ99469 402 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 KLHDC3Q9BQ90 382 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 DOHHQ9BU89 302 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 PIGUQ9H490 435 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 DUSP22Q9NRW4 184 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 SLC6A13Q9NSD5 602 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 DDX18Q9NVP1 670 aaKnown RBP8.34□□□□□ -1.07
HMGN1-201ENST00000288344 ARGLU1Q9NWB6 273 aaPredicted RBP8.34□□□□□ -1.07
HMGN1-201ENST00000288344 MARCOQ9UEW3 520 aaPredicted RBP8.34□□□□□ -1.07
HMGN1-201ENST00000288344 MAPRE3Q9UPY8 281 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 MEMO1Q9Y316 297 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 USH1CQ9Y6N9 552 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 LRBAP50851 2863 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 MAST4O15021 2626 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 NAV2Q8IVL1 2488 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 KIAA1549Q9HCM3 1950 aa8.34□□□□□ -1.07
HMGN1-201ENST00000288344 GOLGA8QA0A0J9YX86 632 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 GOLGA8OA6NCC3 632 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 TRPC5OSA6NMA1 111 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 E9PLN8 166 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 GOLGA8NF8WBI6 632 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 TFECO14948 347 aaPredicted RBP8.33□□□□□ -1.08
HMGN1-201ENST00000288344 DNAJA2O60884 412 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 REM1O75628 298 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 KITP10721 976 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 TBXA2RP21731 343 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 ELAVL4P26378 380 aaKnown RBP8.33□□□□□ -1.08
HMGN1-201ENST00000288344 PTGS2P35354 604 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 DGKQP52824 942 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 CLDN15P56746 228 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 CRYZQ08257 329 aaKnown RBP8.33□□□□□ -1.08
HMGN1-201ENST00000288344 PLCXD2Q0VAA5 305 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 EFR3AQ14156 821 aa8.33□□□□□ -1.08
HMGN1-201ENST00000288344 MAPK11Q15759 364 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 314.9 ms