RNA–Protein interactions for RNA: ENST00000287546.8

VPS8-201, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS8, Length 5,047 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-201ENST00000287546 ZNF806P0C7X5 589 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 POLR2CP19387 275 aaPredicted RBP6.52□□□□□ -1.37
VPS8-201ENST00000287546 EIF2S3P41091 472 aaKnown RBP6.52□□□□□ -1.37
VPS8-201ENST00000287546 CCL11P51671 97 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 PPP1R8Q12972 351 aaKnown RBP6.52□□□□□ -1.37
VPS8-201ENST00000287546 TARDBPQ13148 414 aaKnown RBP eCLIP6.52□□□□□ -1.37
VPS8-201ENST00000287546 LSAMPQ13449 338 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 TRAM2Q15035 370 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 ZSWIM7Q19AV6 140 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 PYCR3Q53H96 274 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 PRPF38BQ5VTL8 546 aaKnown RBP6.52□□□□□ -1.37
VPS8-201ENST00000287546 MEDAGQ5VYS4 303 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 FIGLAQ6QHK4 219 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 RNF111Q6ZNA4 994 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 SYNPOQ8N3V7 929 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 TEX29Q8N6K0 151 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 ZNF565Q8N9K5 539 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 NUP37Q8NFH4 326 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 OR4M2Q8NGB6 313 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 OR13C3Q8NGS6 347 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 OR8S1Q8NH09 359 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 SPRYD4Q8WW59 207 aaPredicted RBP6.52□□□□□ -1.37
VPS8-201ENST00000287546 TBC1D20Q96BZ9 403 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 ISOC1Q96CN7 298 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 ZFYVE21Q9BQ24 234 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 WDR77Q9BQA1 342 aaPredicted RBP6.52□□□□□ -1.37
VPS8-201ENST00000287546 OR51I1Q9H343 314 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 MKKSQ9NPJ1 570 aaPredicted RBP6.52□□□□□ -1.37
VPS8-201ENST00000287546 C14orf105Q9NVL8 296 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 HIF1ANQ9NWT6 349 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 PPP4R1LQ9P1A2 415 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 MYOFQ9NZM1 2061 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 TRANK1O15050 2925 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 FAM172BPA6NC97 362 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 SLC16A6O15403 523 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 PAPLNO95428 1278 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 HMGN1P05114 100 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 HOXC4P09017 264 aaPredicted RBP6.52□□□□□ -1.37
VPS8-201ENST00000287546 SLC6A6P31641 620 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 UQCRC1P31930 480 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 SOX9P48436 509 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 CSNK1G2P78368 415 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 GANABQ14697 944 aaKnown RBP6.52□□□□□ -1.37
VPS8-201ENST00000287546 AGERQ15109 404 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 ZNF57Q68EA5 555 aaPredicted RBP6.52□□□□□ -1.37
VPS8-201ENST00000287546 BEND4Q6ZU67 534 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 RNF175Q8N4F7 328 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 ACOT4Q8N9L9 421 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 NUP43Q8NFH3 380 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 RPLP0P6Q8NHW5 317 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 CIDECQ96AQ7 238 aaPredicted RBP6.52□□□□□ -1.37
VPS8-201ENST00000287546 C12orf43Q96C57 262 aaKnown RBP6.52□□□□□ -1.37
VPS8-201ENST00000287546 TMCO6Q96DC7 493 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 FCRL1Q96LA6 429 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 TGM7Q96PF1 710 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 CENPMQ9NSP4 180 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 CUEDC1Q9NWM3 386 aaPredicted RBP6.52□□□□□ -1.37
VPS8-201ENST00000287546 QPCTLQ9NXS2 382 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 ACSL6Q9UKU0 697 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 SLC17A4Q9Y2C5 497 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 TLR4O00206 839 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 ALOX12P18054 663 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 MYL9P24844 172 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 FMO3P31513 532 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 ARF3P61204 181 aaPredicted RBP6.52□□□□□ -1.37
VPS8-201ENST00000287546 ADARB1P78563 741 aaKnown RBP6.52□□□□□ -1.37
VPS8-201ENST00000287546 ARF1P84077 181 aaKnown RBP6.52□□□□□ -1.37
VPS8-201ENST00000287546 APOFQ13790 326 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 EFR3AQ14156 821 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 MED22Q15528 200 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 NKPD1Q17RQ9 610 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 SLC5A12Q1EHB4 618 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 MICAQ29983 383 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 QSOX2Q6ZRP7 698 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 ZNF551Q7Z340 670 aaPredicted RBP6.52□□□□□ -1.37
VPS8-201ENST00000287546 GPR155Q7Z3F1 870 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 ARHGAP22Q7Z5H3 698 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 ZNF687Q8N1G0 1237 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 PRR7Q8TB68 274 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 GABARAPL1Q9H0R8 117 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 ADAP2Q9NPF8 381 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 HAO2Q9NYQ3 351 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 MBD2Q9UBB5 411 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 FBXO9Q9UK97 447 aaPredicted RBP6.52□□□□□ -1.37
VPS8-201ENST00000287546 USP22Q9UPT9 525 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 TRPM6Q9BX84 2022 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 OR6C74A6NCV1 312 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 OR52A4PA6NMU1 304 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 RIIAD1A6NNX1 92 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 CHST10O43529 356 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 DPM1O60762 260 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 CHRM5P08912 532 aaPredicted RBP6.52□□□□□ -1.37
VPS8-201ENST00000287546 ZNF16P17020 682 aaPredicted RBP6.52□□□□□ -1.37
VPS8-201ENST00000287546 ELK4P28324 431 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 GGT2P36268 569 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 TRIM23P36406 574 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 VBP1P61758 197 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 TUBA1BP68363 451 aa6.52□□□□□ -1.37
VPS8-201ENST00000287546 PUM1Q14671 1186 aaKnown RBP eCLIP6.52□□□□□ -1.37
VPS8-201ENST00000287546 FXNQ16595 210 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms