RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 SDC2P34741 201 aa17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 ETV5P41161 510 aa17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 MAP2K3P46734 347 aa17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 ETV1P50549 477 aa17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 WNT4P56705 351 aa17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 EFR3AQ14156 821 aa17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 KLHL22Q53GT1 634 aa17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 SZRD1Q7Z422 152 aa17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 BCDIN3DQ7Z5W3 292 aaKnown RBP17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 SHISA5Q8N114 240 aa17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 ANGPTL6Q8NI99 470 aa17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 RAB8BQ92930 207 aa17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 OTUB1Q96FW1 271 aaPredicted RBP17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 SYNDIG1Q9H7V2 258 aa17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 POLMQ9NP87 494 aaPredicted RBP17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 PRDM7Q9NQW5 492 aa17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 SIRT3Q9NTG7 399 aaPredicted RBP17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 TVP23BQ9NYZ1 205 aa17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 PCOLCE2Q9UKZ9 415 aa17.14■□□□□ 0.33
PDLIM3-201ENST00000284767 TLX2O43763 284 aaPredicted RBP17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 TP53P04637 393 aaPredicted RBP17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 NR2F6P10588 404 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 MYL12AP19105 171 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 ALAS2P22557 587 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 PCBP4P57723 403 aaKnown RBP17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 HOXC5Q00444 222 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 COX10Q12887 443 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 TARDBPQ13148 414 aaKnown RBP eCLIP17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 TNK1Q13470 666 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 SYT14P1Q58G82 188 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 TJAP1Q5JTD0 557 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 FAM209AQ5JX71 171 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 C18orf63Q68DL7 685 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 MZT2BQ6NZ67 158 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 ABHD17CQ6PCB6 329 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 CD300LDQ6UXZ3 194 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 ZNF730Q6ZMV8 503 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 HORMAD2Q8N7B1 307 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 YIPF7Q8N8F6 280 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 ACOT4Q8N9L9 421 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 TMEM19Q96HH6 336 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 ZNF354BQ96LW1 612 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 KATNB1Q9BVA0 655 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 IRF2BPLQ9H1B7 796 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 LRP4O75096 1905 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 IRGMA1A4Y4 181 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 GSAPA4D1B5 854 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 ERVH48-1M5A8F1 160 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 SLC30A4O14863 429 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 PRKYO43930 277 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 ZNF780AO75290 641 aaPredicted RBP17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 ERAL1O75616 437 aaKnown RBP17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 C8orf89P0DMQ9 161 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 SRFP11831 508 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 GZMKP49863 264 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 ABATP80404 500 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 DUSP2Q05923 314 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 TPBGQ13641 420 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 NDUFA9Q16795 377 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 TATDN3Q17R31 274 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 METAP1DQ6UB28 335 aaPredicted RBP17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 DEF8Q6ZN54 512 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 QSOX2Q6ZRP7 698 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 VN1R4Q7Z5H5 301 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 C19orf18Q8NEA5 215 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 ATP6V1C2Q8NEY4 427 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 FLVCR1-AS1Q8TAF5 88 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 TMEM203Q969S6 136 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 MED30Q96HR3 178 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 QRFPRQ96P65 431 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 LMAN1LQ9HAT1 526 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 SEMA3GQ9NS98 782 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 RBFOX1Q9NWB1 397 aaKnown RBP17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 ZSCAN32Q9NX65 697 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 GSTK1Q9Y2Q3 226 aa17.13■□□□□ 0.33
PDLIM3-201ENST00000284767 A0A1W2PR48 441 aa17.12■□□□□ 0.33
PDLIM3-201ENST00000284767 TMEM129A0AVI4 362 aa17.12■□□□□ 0.33
PDLIM3-201ENST00000284767 OR6C74A6NCV1 312 aa17.12■□□□□ 0.33
PDLIM3-201ENST00000284767 TNFRSF10CO14798 259 aa17.12■□□□□ 0.33
PDLIM3-201ENST00000284767 C1QBP02746 253 aa17.12■□□□□ 0.33
PDLIM3-201ENST00000284767 HIST1H1TP22492 207 aaPredicted RBP17.12■□□□□ 0.33
PDLIM3-201ENST00000284767 ILF3Q12906 894 aaKnown RBP eCLIP17.12■□□□□ 0.33
PDLIM3-201ENST00000284767 EIF2B5Q13144 721 aaKnown RBP17.12■□□□□ 0.33
PDLIM3-201ENST00000284767 FLYWCH1Q4VC44 716 aa17.12■□□□□ 0.33
PDLIM3-201ENST00000284767 TRIQKQ629K1 86 aa17.12■□□□□ 0.33
PDLIM3-201ENST00000284767 ABI3BPQ7Z7G0 1075 aa17.12■□□□□ 0.33
PDLIM3-201ENST00000284767 CADM2Q8N3J6 435 aa17.12■□□□□ 0.33
PDLIM3-201ENST00000284767 DUSP18Q8NEJ0 188 aa17.12■□□□□ 0.33
PDLIM3-201ENST00000284767 TTC9Q92623 222 aa17.12■□□□□ 0.33
PDLIM3-201ENST00000284767 PCDHGB7Q9Y5F8 929 aa17.12■□□□□ 0.33
PDLIM3-201ENST00000284767 PRAMEF26H0Y7S4 382 aa17.12■□□□□ 0.33
PDLIM3-201ENST00000284767 SH3BP5O60239 455 aa17.12■□□□□ 0.33
PDLIM3-201ENST00000284767 CTSVO60911 334 aa17.12■□□□□ 0.33
PDLIM3-201ENST00000284767 CPNE3O75131 537 aaKnown RBP17.12■□□□□ 0.33
PDLIM3-201ENST00000284767 SLC2A2P11168 524 aaPredicted RBP17.12■□□□□ 0.33
PDLIM3-201ENST00000284767 GLULP15104 373 aa17.12■□□□□ 0.33
PDLIM3-201ENST00000284767 PVRP15151 417 aa17.12■□□□□ 0.33
PDLIM3-201ENST00000284767 TNNI3P19429 210 aa17.12■□□□□ 0.33
PDLIM3-201ENST00000284767 ATP5A1P25705 553 aaKnown RBP17.12■□□□□ 0.33
PDLIM3-201ENST00000284767 PTBP1P26599 531 aaKnown RBP eCLIP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms