RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 SULT1C2O00338 296 aa15.58■□□□□ 0.08
SH3RF1-201ENST00000284637 LATO43561 262 aa15.58■□□□□ 0.08
SH3RF1-201ENST00000284637 SLC22A5O76082 557 aa15.58■□□□□ 0.08
SH3RF1-201ENST00000284637 RHOP08100 348 aa15.58■□□□□ 0.08
SH3RF1-201ENST00000284637 FBXO45P0C2W1 286 aa15.58■□□□□ 0.08
SH3RF1-201ENST00000284637 C6P13671 934 aa15.58■□□□□ 0.08
SH3RF1-201ENST00000284637 SMIM14Q96QK8 99 aa15.58■□□□□ 0.08
SH3RF1-201ENST00000284637 MFFQ9GZY8 342 aa15.58■□□□□ 0.08
SH3RF1-201ENST00000284637 TSTD3H0UI37 97 aa15.58■□□□□ 0.08
SH3RF1-201ENST00000284637 RETREG3Q86VR2 466 aa15.58■□□□□ 0.08
SH3RF1-201ENST00000284637 ELP5Q8TE02 316 aa15.58■□□□□ 0.08
SH3RF1-201ENST00000284637 PSD2Q9BQI7 771 aa15.58■□□□□ 0.08
SH3RF1-201ENST00000284637 KATNBL1Q9H079 304 aa15.58■□□□□ 0.08
SH3RF1-201ENST00000284637 ASF1BQ9NVP2 202 aa15.58■□□□□ 0.08
SH3RF1-201ENST00000284637 RBFOX1Q9NWB1 397 aaKnown RBP15.58■□□□□ 0.08
SH3RF1-201ENST00000284637 C9J4A7 227 aa15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 UBFD1O14562 309 aaKnown RBP15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 GOSR2O14653 212 aa15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 CERS1P27544 350 aa15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 PCGF2P35227 344 aa15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 POLR2IP36954 125 aaKnown RBP15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 GALK2Q01415 458 aa15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 TP53I3Q53FA7 332 aa15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 LEG1Q6P5S2 330 aa15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 THAP7Q9BT49 309 aaPredicted RBP15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 FN3KQ9H479 309 aa15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 NPIPB15A6NHN6 443 aaPredicted RBP15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 PPP1R3DO95685 299 aa15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 FPGSQ05932 587 aa15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 CDC20Q12834 499 aa15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 GNMTQ14749 295 aa15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 PHF19Q5T6S3 580 aa15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 MANEALQ5VSG8 457 aa15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 ZNF529Q6P280 563 aa15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 SERPINA11Q86U17 422 aa15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 PARP4Q9UKK3 1724 aaKnown RBP15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 OIP5O43482 229 aa15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 PRAMEF2O60811 474 aa15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 ZNF35P13682 527 aa15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 IL1RNP18510 177 aa15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 CD34P28906 385 aa15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 TMEM35AQ53FP2 167 aa15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 CARD17Q5XLA6 110 aa15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 METTL2BQ6P1Q9 378 aaKnown RBP15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 ARHGAP12Q8IWW6 846 aa15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 SMARCD2Q92925 531 aa15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 PNPLA2Q96AD5 504 aa15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 NECAB3Q96P71 396 aaPredicted RBP15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 PTGES2Q9H7Z7 377 aa15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 ADH1BP00325 375 aa15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 IL1AP01583 271 aa15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 ADH6P28332 368 aa15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 INAVAQ3KP66 663 aa15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 ADPRMQ3LIE5 342 aa15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 TMEM173Q86WV6 379 aaPredicted RBP15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 OR13C3Q8NGS6 347 aa15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 ANGPTL6Q8NI99 470 aa15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 ZMYND19Q96E35 227 aaPredicted RBP15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 URM1Q9BTM9 101 aaKnown RBP15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 MYEF2Q9P2K5 600 aaKnown RBP15.57■□□□□ 0.08
SH3RF1-201ENST00000284637 KDM4FA0A1W2PPD8 638 aa15.56■□□□□ 0.08
SH3RF1-201ENST00000284637 METTL15A6NJ78 407 aa15.56■□□□□ 0.08
SH3RF1-201ENST00000284637 MMP12P39900 470 aa15.56■□□□□ 0.08
SH3RF1-201ENST00000284637 NR0B1P51843 470 aaKnown RBP15.56■□□□□ 0.08
SH3RF1-201ENST00000284637 RIDAP52758 137 aaKnown RBP15.56■□□□□ 0.08
SH3RF1-201ENST00000284637 ERVFC1P60507 584 aa15.56■□□□□ 0.08
SH3RF1-201ENST00000284637 RAB11BQ15907 218 aa15.56■□□□□ 0.08
SH3RF1-201ENST00000284637 Q6ZPB1 254 aaPredicted RBP15.56■□□□□ 0.08
SH3RF1-201ENST00000284637 SERTAD3Q9UJW9 196 aa15.56■□□□□ 0.08
SH3RF1-201ENST00000284637 FABP7O15540 132 aa15.56■□□□□ 0.08
SH3RF1-201ENST00000284637 HRH2P25021 359 aa15.56■□□□□ 0.08
SH3RF1-201ENST00000284637 AADACL4Q5VUY2 407 aa15.56■□□□□ 0.08
SH3RF1-201ENST00000284637 TMEM234Q8WY98 164 aa15.56■□□□□ 0.08
SH3RF1-201ENST00000284637 ATOH8Q96SQ7 321 aa15.56■□□□□ 0.08
SH3RF1-201ENST00000284637 SORBS1Q9BX66 1292 aaKnown RBP15.56■□□□□ 0.08
SH3RF1-201ENST00000284637 B3GAT2Q9NPZ5 323 aa15.56■□□□□ 0.08
SH3RF1-201ENST00000284637 FBXO8Q9NRD0 319 aa15.56■□□□□ 0.08
SH3RF1-201ENST00000284637 CNOT2Q9NZN8 540 aaKnown RBP15.56■□□□□ 0.08
SH3RF1-201ENST00000284637 IFT172Q9UG01 1749 aa15.56■□□□□ 0.08
SH3RF1-201ENST00000284637 NAP1L6A6NFF2 107 aa15.56■□□□□ 0.08
SH3RF1-201ENST00000284637 P2RX3P56373 397 aa15.56■□□□□ 0.08
SH3RF1-201ENST00000284637 C1orf61Q13536 156 aa15.56■□□□□ 0.08
SH3RF1-201ENST00000284637 NKPD1Q17RQ9 610 aa15.56■□□□□ 0.08
SH3RF1-201ENST00000284637 PCGF3Q3KNV8 242 aa15.56■□□□□ 0.08
SH3RF1-201ENST00000284637 OR5D16Q8NGK9 328 aa15.56■□□□□ 0.08
SH3RF1-201ENST00000284637 MTHFD2LQ9H903 347 aaPredicted RBP15.56■□□□□ 0.08
SH3RF1-201ENST00000284637 ASB6Q9NWX5 421 aa15.56■□□□□ 0.08
SH3RF1-201ENST00000284637 KLK4Q9Y5K2 254 aa15.56■□□□□ 0.08
SH3RF1-201ENST00000284637 CFIP05156 583 aa15.56■□□□□ 0.08
SH3RF1-201ENST00000284637 PTGER1P34995 402 aa15.56■□□□□ 0.08
SH3RF1-201ENST00000284637 ELAVL3Q14576 367 aaKnown RBP15.56■□□□□ 0.08
SH3RF1-201ENST00000284637 TRNP1Q6NT89 227 aa15.56■□□□□ 0.08
SH3RF1-201ENST00000284637 SLC35B4Q969S0 331 aa15.56■□□□□ 0.08
SH3RF1-201ENST00000284637 HOXD1Q9GZZ0 328 aa15.56■□□□□ 0.08
SH3RF1-201ENST00000284637 CLDND1Q9NY35 253 aa15.56■□□□□ 0.08
SH3RF1-201ENST00000284637 AQP2P41181 271 aa15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 RPS21P63220 83 aaKnown RBP15.55■□□□□ 0.08
SH3RF1-201ENST00000284637 SYT6Q5T7P8 510 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms