RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 GABRR3A8MPY1 467 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 C17orf105B2RV13 164 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 I3L521 148 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 OR12D1P0DN82 309 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 F3P13726 295 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 ZNF182P17025 639 aaPredicted RBP3.85□□□□□ -1.79
SCN3A-201ENST00000283254 CHRNB2P17787 502 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 ADH7P40394 386 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 AFF3P51826 1226 aaKnown RBP3.85□□□□□ -1.79
SCN3A-201ENST00000283254 SEMG2Q02383 582 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 HNRNPA0Q13151 305 aaKnown RBP3.85□□□□□ -1.79
SCN3A-201ENST00000283254 GRIN2CQ14957 1233 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 PON2Q15165 354 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 PPA1Q15181 289 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 AARDQ4LEZ3 155 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 TSSK4Q6SA08 328 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 TMPRSS9Q7Z410 1059 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 MKXQ8IYA7 352 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 ZNF431Q8TF32 576 aaPredicted RBP3.85□□□□□ -1.79
SCN3A-201ENST00000283254 THAP3Q8WTV1 239 aaPredicted RBP3.85□□□□□ -1.79
SCN3A-201ENST00000283254 SENP5Q96HI0 755 aaPredicted RBP3.85□□□□□ -1.79
SCN3A-201ENST00000283254 ATG5Q9H1Y0 275 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 TSPAN10Q9H1Z9 355 aaPredicted RBP3.85□□□□□ -1.79
SCN3A-201ENST00000283254 GCM1Q9NP62 436 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 HHLA2Q9UM44 414 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 CORINQ9Y5Q5 1042 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 SSX4O60224 188 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 CLN5O75503 358 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 CRTAPO75718 401 aaPredicted RBP3.85□□□□□ -1.79
SCN3A-201ENST00000283254 STK17BO94768 372 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 CNOT4O95628 575 aaKnown RBP3.85□□□□□ -1.79
SCN3A-201ENST00000283254 PLATP00750 562 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 AMY2AP04746 511 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 SERPINA5P05154 406 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 RETP07949 1114 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 CDK4P11802 303 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 CX3CR1P49238 355 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 RABGGTBP53611 331 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 HTD2P86397 168 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 GALNT1Q10472 559 aaPredicted RBP3.85□□□□□ -1.79
SCN3A-201ENST00000283254 DOC2AQ14183 400 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 PCBP2Q15366 365 aaKnown RBP eCLIP3.85□□□□□ -1.79
SCN3A-201ENST00000283254 NKPD1Q17RQ9 610 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 CREB3L2Q70SY1 520 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 FBXL8Q96CD0 374 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 ERVK13-1Q9NX77 482 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 RNF186Q9NXI6 227 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 PLEK2Q9NYT0 353 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 PISDQ9UG56 409 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 WIF1Q9Y5W5 379 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 TCRBV7S2A1N4TA0A589 114 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 MRPL33O75394 65 aaKnown RBP3.85□□□□□ -1.79
SCN3A-201ENST00000283254 RFPL1O75677 317 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 STC2O76061 302 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 PENKP01210 267 aaPredicted RBP3.85□□□□□ -1.79
SCN3A-201ENST00000283254 CA3P07451 260 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 CYBAP13498 195 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 GLB1P16278 677 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 PRSS3P35030 304 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 CD79BP40259 229 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 GDF5P43026 501 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 RPL23AP62750 156 aaKnown RBP3.85□□□□□ -1.79
SCN3A-201ENST00000283254 ADAM17P78536 824 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 AGAP7PQ5VUJ5 663 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 AGAP6Q5VW22 663 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 ZNF529Q6P280 563 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 CYS1Q717R9 158 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 FAM160A2Q8N612 972 aaPredicted RBP3.85□□□□□ -1.79
SCN3A-201ENST00000283254 CNEP1R1Q8N9A8 125 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 ZNF454Q8N9F8 522 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 TRUB1Q8WWH5 349 aaKnown RBP3.85□□□□□ -1.79
SCN3A-201ENST00000283254 LRR1Q96L50 414 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 AGAP4Q96P64 663 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 TWNKQ96RR1 684 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 PHOX2BQ99453 314 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 PBX4Q9BYU1 374 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 COQ3Q9NZJ6 369 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 KLHL9Q9P2J3 617 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 REV1Q9UBZ9 1251 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 C20orf202A1L168 122 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 ZNF736B4DX44 427 aaPredicted RBP3.85□□□□□ -1.79
SCN3A-201ENST00000283254 SSX5O60225 188 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 EIF1BO60739 113 aaKnown RBP3.85□□□□□ -1.79
SCN3A-201ENST00000283254 TGM6O95932 706 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 FCER2P06734 321 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 MSR1P21757 451 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 NFYAP23511 347 aaPredicted RBP3.85□□□□□ -1.79
SCN3A-201ENST00000283254 IL2RGP31785 369 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 IDUAP35475 653 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 YPEL5P62699 121 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 SLC35A1P78382 337 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 MPPED2Q15777 294 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 ZNF181Q2M3W8 571 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 ACTBL2Q562R1 376 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 NDUFAF5Q5TEU4 345 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 LRFN4Q6PJG9 635 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 TMEM107Q6UX40 140 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 NAT8LQ8N9F0 302 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 CSNK2A3Q8NEV1 391 aa3.85□□□□□ -1.79
SCN3A-201ENST00000283254 IL17RDQ8NFM7 739 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms