RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 WIF1Q9Y5W5 379 aa5.98□□□□□ -1.45
CD44-204ENST00000279452 LIPGQ9Y5X9 500 aa5.98□□□□□ -1.45
CD44-204ENST00000279452 FAM208BQ5VWN6 2430 aa5.98□□□□□ -1.45
CD44-204ENST00000279452 LOC400499M0QZD8 3231 aa5.98□□□□□ -1.45
CD44-204ENST00000279452 MED13Q9UHV7 2174 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 TRGV5A0A0B4J1U4 118 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 ANKRD33BA6NCL7 494 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 TMEM247A6NEH6 219 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 DUXAA6NLW8 204 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 C17orf51A8MQB3 221 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 FAM47E-STBD1D6RA91 191 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 CCL21O00585 134 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 SNPHO15079 494 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 NDUFB5O43674 189 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 TRIM3O75382 744 aaPredicted RBP5.97□□□□□ -1.45
CD44-204ENST00000279452 CYP7B1O75881 506 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 GLSO94925 669 aaPredicted RBP5.97□□□□□ -1.45
CD44-204ENST00000279452 KRT75O95678 551 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 ANGPTL1O95841 491 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 NUDT14O95848 222 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 IGKV1D-16P01601 117 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 OR12D1P0DN82 309 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 DCTP40126 519 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 CRATP43155 626 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 ATP4BP51164 291 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 CCR4P51679 360 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 GYS2P54840 703 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 PER3P56645 1201 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 GNGT1P63211 74 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 PHC1P78364 1004 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 FOXO1Q12778 655 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 SNTA1Q13424 505 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 GPR68Q15743 365 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 C3AR1Q16581 482 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 WIPI1Q5MNZ9 446 aaPredicted RBP5.97□□□□□ -1.45
CD44-204ENST00000279452 RAET1LQ5VY80 246 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 SAXO2Q658L1 398 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 TIGD3Q6B0B8 471 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 ZNF585AQ6P3V2 769 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 BNC2Q6ZN30 1099 aaPredicted RBP5.97□□□□□ -1.45
CD44-204ENST00000279452 OLIG3Q7RTU3 272 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 YRDCQ86U90 279 aaKnown RBP5.97□□□□□ -1.45
CD44-204ENST00000279452 PLCZ1Q86YW0 608 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 FAM26EQ8N5C1 309 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 ZNF527Q8NB42 609 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 OR5M9Q8NGP3 310 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 PHOSPHO1Q8TCT1 267 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 XAGE5Q8WWM1 108 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 SH3YL1Q96HL8 342 aaPredicted RBP5.97□□□□□ -1.45
CD44-204ENST00000279452 BARD1Q99728 777 aaKnown RBP5.97□□□□□ -1.45
CD44-204ENST00000279452 PTGES2Q9H7Z7 377 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 CACYBPQ9HB71 228 aaKnown RBP5.97□□□□□ -1.45
CD44-204ENST00000279452 PROK2Q9HC23 129 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 DUSP22Q9NRW4 184 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 FBXO34Q9NWN3 711 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 NTMQ9P121 344 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.97□□□□□ -1.45
CD44-204ENST00000279452 ACAD8Q9UKU7 415 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 ABCG2Q9UNQ0 655 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 SLC5A6Q9Y289 635 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 RPH3AQ9Y2J0 694 aaPredicted RBP5.97□□□□□ -1.45
CD44-204ENST00000279452 SLC6A5Q9Y345 797 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 MGAQ8IWI9 3026 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 SEC16AO15027 2179 aa5.97□□□□□ -1.45
CD44-204ENST00000279452 IGSF10Q6WRI0 2623 aa5.96□□□□□ -1.45
CD44-204ENST00000279452 CACNA1GO43497 2377 aa5.96□□□□□ -1.45
CD44-204ENST00000279452 ZFYVE26Q68DK2 2539 aa5.96□□□□□ -1.45
CD44-204ENST00000279452 A0A1B0GUH1 482 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 H3BNH8 94 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 GTPBP1O00178 669 aaKnown RBP5.96□□□□□ -1.46
CD44-204ENST00000279452 HCRTR2O43614 444 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 SCN2BO60939 215 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 SEMA7AO75326 666 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 CBR3O75828 277 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 OXSR1O95747 527 aaPredicted RBP5.96□□□□□ -1.46
CD44-204ENST00000279452 AGR2O95994 175 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 AK1P00568 194 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 NR2F1P10589 423 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 HK1P19367 917 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 CAPN3P20807 821 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 DPP4P27487 766 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 PTPN6P29350 595 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 PTGDSP41222 190 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 ZNF41P51814 821 aaPredicted RBP5.96□□□□□ -1.46
CD44-204ENST00000279452 IRX1P78414 480 aaPredicted RBP5.96□□□□□ -1.46
CD44-204ENST00000279452 UBAP2LQ14157 1087 aaKnown RBP5.96□□□□□ -1.46
CD44-204ENST00000279452 RCAN2Q14206 197 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.96□□□□□ -1.46
CD44-204ENST00000279452 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.96□□□□□ -1.46
CD44-204ENST00000279452 MMEL1Q495T6 779 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 GTDC1Q4AE62 458 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 C4orf17Q53FE4 359 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 EIPR1Q53HC9 387 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.96□□□□□ -1.46
CD44-204ENST00000279452 WLSQ5T9L3 541 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 CGB2Q6NT52 195 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 PPP4R4Q6NUP7 873 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 BLOC1S3Q6QNY0 202 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 MSANTD1Q6ZTZ1 278 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 TRILQ7L0X0 811 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms