RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 RAB1BQ9H0U4 201 aa4.19□□□□□ -1.74
CD44-202ENST00000278385 ELOVL6Q9H5J4 265 aa4.19□□□□□ -1.74
CD44-202ENST00000278385 SMYD3Q9H7B4 428 aa4.19□□□□□ -1.74
CD44-202ENST00000278385 MTHFD2LQ9H903 347 aaPredicted RBP4.19□□□□□ -1.74
CD44-202ENST00000278385 NTN4Q9HB63 628 aa4.19□□□□□ -1.74
CD44-202ENST00000278385 LYRM4Q9HD34 91 aa4.19□□□□□ -1.74
CD44-202ENST00000278385 RAB18Q9NP72 206 aa4.19□□□□□ -1.74
CD44-202ENST00000278385 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.19□□□□□ -1.74
CD44-202ENST00000278385 SMOXQ9NWM0 555 aa4.19□□□□□ -1.74
CD44-202ENST00000278385 PSORS1C1Q9UIG5 152 aa4.19□□□□□ -1.74
CD44-202ENST00000278385 FZD4Q9ULV1 537 aa4.19□□□□□ -1.74
CD44-202ENST00000278385 PADI3Q9ULW8 664 aa4.19□□□□□ -1.74
CD44-202ENST00000278385 RNF115Q9Y4L5 304 aa4.19□□□□□ -1.74
CD44-202ENST00000278385 COX11Q9Y6N1 276 aa4.19□□□□□ -1.74
CD44-202ENST00000278385 TRIOBPQ9H2D6 2365 aa4.19□□□□□ -1.74
CD44-202ENST00000278385 LTBP2Q14767 1821 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 SCN10AQ9Y5Y9 1956 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 C1orf232A0A0U1RR37 186 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 LOC390937A0A1W2PQ73 354 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 A0A1W2PRB8 838 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 WDR27A2RRH5 827 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 LINC01553A4QN01 128 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 DPPA5A6NC42 116 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 OR5K4A6NMS3 321 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 E7ENQ6 273 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 TEX46H3BTG2 121 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 GOLGA8RI6L899 631 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 CHEK1O14757 476 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 SCAMP2O15127 329 aaKnown RBP4.18□□□□□ -1.74
CD44-202ENST00000278385 MSH4O15457 936 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 EDIL3O43854 480 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 ATP2C2O75185 946 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 RPS6KA5O75582 802 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 ATP6AP2O75787 350 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 CCNB2O95067 398 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 BAG4O95429 457 aaKnown RBP4.18□□□□□ -1.74
CD44-202ENST00000278385 H6PDO95479 791 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 CST1P01037 141 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 HLA-DRAP01903 254 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 IL6RP08887 468 aaPredicted RBP4.18□□□□□ -1.74
CD44-202ENST00000278385 CD63P08962 238 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 FCGR1AP12314 374 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 ENGP17813 658 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 PSMB6P28072 239 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 CD40LGP29965 261 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 CD52P31358 61 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 RPL21P46778 160 aaKnown RBP4.18□□□□□ -1.74
CD44-202ENST00000278385 ARRB1P49407 418 aaPredicted RBP4.18□□□□□ -1.74
CD44-202ENST00000278385 NDST2P52849 883 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 P2RX3P56373 397 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 CLDN15P56746 228 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 GPX6P59796 221 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 MRPS21P82921 87 aaKnown RBP4.18□□□□□ -1.74
CD44-202ENST00000278385 CDH17Q12864 832 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 GRIK2Q13002 908 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 ITGADQ13349 1161 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 ILKQ13418 452 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 NPTX1Q15818 432 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 MICBQ29980 383 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 ESCO2Q56NI9 601 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 ZNF470Q6ECI4 717 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 UGT3A1Q6NUS8 523 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 TMEM71Q6P5X7 295 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 VSTM1Q6UX27 236 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 TMIGD1Q6UXZ0 262 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 CYP4V2Q6ZWL3 525 aaPredicted RBP4.18□□□□□ -1.74
CD44-202ENST00000278385 MAVSQ7Z434 540 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 DCXRQ7Z4W1 244 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 TMPRSS11BQ86T26 416 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 CYP4Z1Q86W10 505 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 PLCZ1Q86YW0 608 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 PARP16Q8N5Y8 322 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 METTL13Q8N6R0 699 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 SYT14Q8NB59 555 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 OR5T3Q8NGG3 340 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 MARCH1Q8TCQ1 289 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 SMG7Q92540 1137 aaKnown RBP4.18□□□□□ -1.74
CD44-202ENST00000278385 NRGNQ92686 78 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 PROX1Q92786 737 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 ATOH1Q92858 354 aaPredicted RBP4.18□□□□□ -1.74
CD44-202ENST00000278385 SARAFQ96BY9 339 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 ZNF689Q96CS4 500 aaPredicted RBP4.18□□□□□ -1.74
CD44-202ENST00000278385 COQ8BQ96D53 544 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 RNF183Q96D59 192 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 ASB9Q96DX5 294 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 CERS2Q96G23 380 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 TMEM246Q9BRR3 403 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 PELOQ9BRX2 385 aaKnown RBP4.18□□□□□ -1.74
CD44-202ENST00000278385 EFHD1Q9BUP0 239 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 C20orf24Q9BUV8 137 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 ST6GALNAC5Q9BVH7 336 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 SLC2A11Q9BYW1 496 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 TSGA10Q9BZW7 698 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 ROGDIQ9GZN7 287 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 SPRTNQ9H040 489 aaPredicted RBP4.18□□□□□ -1.74
CD44-202ENST00000278385 MCCC2Q9HCC0 563 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 NT5MQ9NPB1 228 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 HINT3Q9NQE9 182 aaKnown RBP4.18□□□□□ -1.74
CD44-202ENST00000278385 TXLNGQ9NUQ3 528 aa4.18□□□□□ -1.74
CD44-202ENST00000278385 MED17Q9NVC6 651 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms