RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 OR2W5A6NFC9 320 aa8.91□□□□□ -0.98
TRIM55-201ENST00000276573 PEX12O00623 359 aa8.91□□□□□ -0.98
TRIM55-201ENST00000276573 KIAA0513O60268 411 aa8.91□□□□□ -0.98
TRIM55-201ENST00000276573 BRINP1O60477 761 aa8.91□□□□□ -0.98
TRIM55-201ENST00000276573 CDC123O75794 336 aaPredicted RBP8.91□□□□□ -0.98
TRIM55-201ENST00000276573 KCNK2O95069 426 aa8.91□□□□□ -0.98
TRIM55-201ENST00000276573 THY1P04216 161 aa8.91□□□□□ -0.98
TRIM55-201ENST00000276573 GUSBP08236 651 aa8.91□□□□□ -0.98
TRIM55-201ENST00000276573 STSP08842 583 aa8.91□□□□□ -0.98
TRIM55-201ENST00000276573 NID1P14543 1247 aa8.91□□□□□ -0.98
TRIM55-201ENST00000276573 C21orf33P30042 268 aaPredicted RBP8.91□□□□□ -0.98
TRIM55-201ENST00000276573 HSD17B7P56937 341 aa8.91□□□□□ -0.98
TRIM55-201ENST00000276573 HSD11B2P80365 405 aa8.91□□□□□ -0.98
TRIM55-201ENST00000276573 CDK5Q00535 292 aa8.91□□□□□ -0.98
TRIM55-201ENST00000276573 BNC1Q01954 994 aa8.91□□□□□ -0.98
TRIM55-201ENST00000276573 ZNF155Q12901 538 aaPredicted RBP8.91□□□□□ -0.98
TRIM55-201ENST00000276573 BIKQ13323 160 aa8.91□□□□□ -0.98
TRIM55-201ENST00000276573 ZNF267Q14586 743 aaPredicted RBP8.91□□□□□ -0.98
TRIM55-201ENST00000276573 GINS1Q14691 196 aa8.91□□□□□ -0.98
TRIM55-201ENST00000276573 KCNAB1Q14722 419 aa8.91□□□□□ -0.98
TRIM55-201ENST00000276573 AMZ1Q400G9 498 aa8.91□□□□□ -0.98
TRIM55-201ENST00000276573 UBE2UQ5VVX9 321 aa8.91□□□□□ -0.98
TRIM55-201ENST00000276573 CASP12Q6UXS9 341 aa8.91□□□□□ -0.98
TRIM55-201ENST00000276573 SLC16A12Q6ZSM3 486 aa8.91□□□□□ -0.98
TRIM55-201ENST00000276573 PLEKHM3Q6ZWE6 761 aa8.91□□□□□ -0.98
TRIM55-201ENST00000276573 RRM2BQ7LG56 351 aa8.91□□□□□ -0.98
TRIM55-201ENST00000276573 PLXDC1Q8IUK5 500 aa8.91□□□□□ -0.98
TRIM55-201ENST00000276573 NKAIN4Q8IVV8 208 aa8.91□□□□□ -0.98
TRIM55-201ENST00000276573 METTL27Q8N6F8 245 aaPredicted RBP8.91□□□□□ -0.98
TRIM55-201ENST00000276573 TOR1AIP2Q8NFQ8 470 aa8.91□□□□□ -0.98
TRIM55-201ENST00000276573 SLC41A3Q96GZ6 507 aa8.91□□□□□ -0.98
TRIM55-201ENST00000276573 DGAT2Q96PD7 388 aa8.91□□□□□ -0.98
TRIM55-201ENST00000276573 IL4I1Q96RQ9 567 aa8.91□□□□□ -0.98
TRIM55-201ENST00000276573 DCUN1D5Q9BTE7 237 aa8.91□□□□□ -0.98
TRIM55-201ENST00000276573 SLC25A19Q9HC21 320 aa8.91□□□□□ -0.98
TRIM55-201ENST00000276573 ENAMQ9NRM1 1142 aa8.91□□□□□ -0.98
TRIM55-201ENST00000276573 GPR83Q9NYM4 423 aa8.91□□□□□ -0.98
TRIM55-201ENST00000276573 SEMA5BQ9P283 1151 aa8.91□□□□□ -0.98
TRIM55-201ENST00000276573 ENPP5Q9UJA9 477 aa8.91□□□□□ -0.98
TRIM55-201ENST00000276573 PRUNE2Q8WUY3 3088 aa8.91□□□□□ -0.98
TRIM55-201ENST00000276573 TRIOO75962 3097 aa8.9□□□□□ -0.98
TRIM55-201ENST00000276573 NPIPA5A0A0B4J1W7 369 aa8.9□□□□□ -0.98
TRIM55-201ENST00000276573 NPIPA7E9PJI5 369 aa8.9□□□□□ -0.98
TRIM55-201ENST00000276573 TMX2-CTNND1H3BSU7 103 aa8.9□□□□□ -0.98
TRIM55-201ENST00000276573 HRKO00198 91 aa8.9□□□□□ -0.98
TRIM55-201ENST00000276573 DUX1O43812 170 aa8.9□□□□□ -0.98
TRIM55-201ENST00000276573 OR2B3O76000 313 aa8.9□□□□□ -0.98
TRIM55-201ENST00000276573 NPIPA8P0DM63 369 aa8.9□□□□□ -0.98
TRIM55-201ENST00000276573 MYF5P13349 255 aa8.9□□□□□ -0.98
TRIM55-201ENST00000276573 SSTR4P31391 388 aa8.9□□□□□ -0.98
TRIM55-201ENST00000276573 GALNSP34059 522 aa8.9□□□□□ -0.98
TRIM55-201ENST00000276573 STT3AP46977 705 aa8.9□□□□□ -0.98
TRIM55-201ENST00000276573 OMPP47874 163 aa8.9□□□□□ -0.98
TRIM55-201ENST00000276573 ARL4DP49703 201 aa8.9□□□□□ -0.98
TRIM55-201ENST00000276573 SEPHS1P49903 392 aa8.9□□□□□ -0.98
TRIM55-201ENST00000276573 ST13P50502 369 aaKnown RBP8.9□□□□□ -0.98
TRIM55-201ENST00000276573 GPLD1P80108 840 aa8.9□□□□□ -0.98
TRIM55-201ENST00000276573 PSG6Q00889 435 aa8.9□□□□□ -0.98
TRIM55-201ENST00000276573 ST3GAL4Q11206 333 aa8.9□□□□□ -0.98
TRIM55-201ENST00000276573 NFATC3Q12968 1075 aa8.9□□□□□ -0.98
TRIM55-201ENST00000276573 TSPAN31Q12999 210 aa8.9□□□□□ -0.98
TRIM55-201ENST00000276573 NR1D2Q14995 579 aa8.9□□□□□ -0.98
TRIM55-201ENST00000276573 ZNHIT3Q15649 155 aaPredicted RBP8.9□□□□□ -0.98
TRIM55-201ENST00000276573 TMEM201Q5SNT2 666 aa8.9□□□□□ -0.98
TRIM55-201ENST00000276573 ACSM5Q6NUN0 579 aa8.9□□□□□ -0.98
TRIM55-201ENST00000276573 ZC3H14Q6PJT7 736 aaKnown RBP8.9□□□□□ -0.98
TRIM55-201ENST00000276573 ZNF730Q6ZMV8 503 aa8.9□□□□□ -0.98
TRIM55-201ENST00000276573 ZAR1Q86SH2 424 aa8.9□□□□□ -0.98
TRIM55-201ENST00000276573 KIF18BQ86Y91 864 aa8.9□□□□□ -0.98
TRIM55-201ENST00000276573 STX19Q8N4C7 294 aa8.9□□□□□ -0.98
TRIM55-201ENST00000276573 Q8N9G6 341 aaPredicted RBP8.9□□□□□ -0.98
TRIM55-201ENST00000276573 B3GNT7Q8NFL0 401 aa8.9□□□□□ -0.98
TRIM55-201ENST00000276573 ACOT11Q8WXI4 607 aaPredicted RBP8.9□□□□□ -0.98
TRIM55-201ENST00000276573 Q96MT0 163 aa8.9□□□□□ -0.98
TRIM55-201ENST00000276573 ELF4Q99607 663 aaPredicted RBP8.9□□□□□ -0.98
TRIM55-201ENST00000276573 POLR2J2Q9GZM3 115 aaKnown RBP8.9□□□□□ -0.98
TRIM55-201ENST00000276573 CAPN10Q9HC96 672 aa8.9□□□□□ -0.98
TRIM55-201ENST00000276573 TIMMDC1Q9NPL8 285 aa8.9□□□□□ -0.98
TRIM55-201ENST00000276573 NECTIN3Q9NQS3 549 aa8.9□□□□□ -0.98
TRIM55-201ENST00000276573 CUTCQ9NTM9 273 aa8.9□□□□□ -0.98
TRIM55-201ENST00000276573 CNOT2Q9NZN8 540 aaKnown RBP8.9□□□□□ -0.98
TRIM55-201ENST00000276573 SELENONQ9NZV5 590 aa8.9□□□□□ -0.98
TRIM55-201ENST00000276573 MUTYHQ9UIF7 546 aa8.9□□□□□ -0.98
TRIM55-201ENST00000276573 CDHR4A6H8M9 788 aa8.9□□□□□ -0.99
TRIM55-201ENST00000276573 EFCAB10A6NFE3 127 aa8.9□□□□□ -0.99
TRIM55-201ENST00000276573 ZNF749O43361 778 aa8.9□□□□□ -0.99
TRIM55-201ENST00000276573 HYAL3O43820 417 aaPredicted RBP8.9□□□□□ -0.99
TRIM55-201ENST00000276573 ENTPD6O75354 484 aa8.9□□□□□ -0.99
TRIM55-201ENST00000276573 BCAS1O75363 584 aaPredicted RBP8.9□□□□□ -0.99
TRIM55-201ENST00000276573 NTN1O95631 604 aa8.9□□□□□ -0.99
TRIM55-201ENST00000276573 LCKP06239 509 aa8.9□□□□□ -0.99
TRIM55-201ENST00000276573 PRG2P13727 222 aa8.9□□□□□ -0.99
TRIM55-201ENST00000276573 MAOAP21397 527 aa8.9□□□□□ -0.99
TRIM55-201ENST00000276573 PSMB9P28065 219 aa8.9□□□□□ -0.99
TRIM55-201ENST00000276573 STAT5AP42229 794 aa8.9□□□□□ -0.99
TRIM55-201ENST00000276573 SLC15A1P46059 708 aa8.9□□□□□ -0.99
TRIM55-201ENST00000276573 DHPSP49366 369 aaPredicted RBP8.9□□□□□ -0.99
TRIM55-201ENST00000276573 ARRB1P49407 418 aaPredicted RBP8.9□□□□□ -0.99
TRIM55-201ENST00000276573 EFNB1P98172 346 aa8.9□□□□□ -0.99
TRIM55-201ENST00000276573 MLLT1Q03111 559 aaPredicted RBP8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms