RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 GPX5O75715 221 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 PRR35P0CG20 571 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 NT5EP21589 574 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 ARFIP1P53367 373 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 MC1RQ01726 317 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 HYAL1Q12794 435 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 ILF3Q12906 894 aaKnown RBP eCLIP10.87□□□□□ -0.673e-17■■□□□ 11.7
CLSTN3-201ENST00000266546 ASAH1Q13510 395 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 TRAM1Q15629 374 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 ASTLQ6HA08 431 aaPredicted RBP10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 FAM109BQ6ICB4 259 aaPredicted RBP10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 LRRN1Q6UXK5 716 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 RFLNAQ6ZTI6 216 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 JAZF1Q86VZ6 243 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 NLRP8Q86W28 1048 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 PAQR7Q86WK9 346 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 OR52E4Q8NGH9 312 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 ZFAND1Q8TCF1 268 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 FCAMRQ8WWV6 532 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 MNTQ99583 582 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 SAV1Q9H4B6 383 aaPredicted RBP10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 BRF2Q9HAW0 419 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 PRSS16Q9NQE7 514 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 RABL2AQ9UBK7 228 aaPredicted RBP10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 CKLFQ9UBR5 152 aa10.87□□□□□ -0.67
CLSTN3-201ENST00000266546 TSC2P49815 1807 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 C1QBP02746 253 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 CISD3P0C7P0 127 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 HOXD11P31277 338 aaPredicted RBP10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 CCR7P32248 378 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 BMP8BP34820 402 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 GIPRP48546 466 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 CAMK1Q14012 370 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 BMP8AQ7Z5Y6 402 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 UBE2Q1Q7Z7E8 422 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 PEG10Q86TG7 708 aaKnown RBP10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 IQCF2Q8IXL9 164 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 PDZD9Q8IXQ8 264 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 COX18Q8N8Q8 333 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 OR56A1Q8NGH5 318 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 TRMT10AQ8TBZ6 339 aaKnown RBP10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 SETD7Q8WTS6 366 aaKnown RBP10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.86□□□□□ -0.677e-6■■■■□ 19.6
CLSTN3-201ENST00000266546 CARS2Q9HA77 564 aaKnown RBP10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 CLEC2DQ9UHP7 191 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 ATPIF1Q9UII2 106 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 PLAGL1Q9UM63 463 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 TAPBPO15533 448 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 LAMTOR5O43504 91 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 SLC43A1O75387 559 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 FCER2P06734 321 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 C8orf89P0DMQ9 161 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 PRKCAP17252 672 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 PCMT1P22061 227 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 BLKP51451 505 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 C8orf82Q6P1X6 216 aaPredicted RBP10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 ARSKQ6UWY0 536 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 ARRDC3Q96B67 414 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 METTL2AQ96IZ6 378 aaKnown RBP10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 OR10A4Q9H209 315 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 FKBP14Q9NWM8 211 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 STOX2Q9P2F5 926 aaPredicted RBP10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 MN1Q10571 1320 aaPredicted RBP10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 C17orf113A0A1B0GUU1 675 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 RNGTTO60942 597 aaKnown RBP10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 CSO75390 466 aaKnown RBP10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 RAB3BP20337 219 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 IL32P24001 234 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 PRLHRP49683 370 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 GRIN2CQ14957 1233 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 INO80EQ8NBZ0 244 aaPredicted RBP10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 BEST4Q8NFU0 473 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 OR6F1Q8NGZ6 308 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 MYADMQ96S97 322 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 LGR4Q9BXB1 951 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 COMMD4Q9H0A8 199 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 EXO5Q9H790 373 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 RLIMQ9NVW2 624 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 SPATA6Q9NWH7 488 aaPredicted RBP10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 SLC39A1Q9NY26 324 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 ASIC5Q9NY37 505 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 B3GNT2Q9NY97 397 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 IL20RAQ9UHF4 553 aa10.86□□□□□ -0.67
CLSTN3-201ENST00000266546 IGLON5A6NGN9 336 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 GIFP27352 417 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 P2RX3P56373 397 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 BTN1A1Q13410 526 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 COL28A1Q2UY09 1125 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 PLK5Q496M5 336 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 HAGHLQ6PII5 290 aaPredicted RBP10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 TMED4Q7Z7H5 227 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.85□□□□□ -0.672e-9■■■■■ 63.5
CLSTN3-201ENST00000266546 LKAAEAR1Q8TD35 194 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 VWCEQ96DN2 955 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 CLIP3Q96DZ5 547 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 C14orf105Q9NVL8 296 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 PTTG3PQ9NZH4 202 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 GNG8Q9UK08 70 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 SNX11Q9Y5W9 270 aa10.85□□□□□ -0.67
CLSTN3-201ENST00000266546 A0A1W2PQU0 124 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms