RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 CHST2Q9Y4C5 530 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 MAU2Q9Y6X3 613 aa8.55□□□□□ -1.04
MSH4-201ENST00000263187 A0A1W2PP55 124 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 E9PI62 339 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 THY1P04216 161 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 ALPPP05187 535 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 EIF2S1P05198 315 aaKnown RBP8.54□□□□□ -1.04
MSH4-201ENST00000263187 ELK1P19419 428 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 SHC1P29353 583 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 KHKP50053 298 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 ASAH1Q13510 395 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 FAM111BQ6SJ93 734 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 QSOX2Q6ZRP7 698 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 ESPNLQ6ZVH7 1005 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.54□□□□□ -1.04
MSH4-201ENST00000263187 FBXO15Q8NCQ5 510 aaPredicted RBP8.54□□□□□ -1.04
MSH4-201ENST00000263187 OR2A1Q8NGT9 310 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 SETD6Q8TBK2 473 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 SNAPC3Q92966 411 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 ATF6BQ99941 703 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 MRPS30Q9NP92 439 aaKnown RBP8.54□□□□□ -1.04
MSH4-201ENST00000263187 HINT3Q9NQE9 182 aaKnown RBP8.54□□□□□ -1.04
MSH4-201ENST00000263187 TMEM74BQ9NUR3 256 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 CA5BQ9Y2D0 317 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 AP1M2Q9Y6Q5 423 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 WDFY3Q8IZQ1 3526 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 C12orf71A8MTZ7 269 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 H3BSH0 61 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 ERVH48-1M5A8F1 160 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 RGS13O14921 159 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 SLC31A1O15431 190 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 LYRM1O43325 122 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 SERPINI2O75830 405 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 YES1P07947 543 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 CLTBP09497 229 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 ENDOUP21128 410 aaKnown RBP8.54□□□□□ -1.04
MSH4-201ENST00000263187 GCGRP47871 477 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 SRP54P61011 504 aaKnown RBP8.54□□□□□ -1.04
MSH4-201ENST00000263187 REEP5Q00765 189 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 SRSF5Q13243 272 aaKnown RBP8.54□□□□□ -1.04
MSH4-201ENST00000263187 ELAVL3Q14576 367 aaKnown RBP8.54□□□□□ -1.04
MSH4-201ENST00000263187 METRNLQ641Q3 311 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 PSRC1Q6PGN9 363 aaPredicted RBP8.54□□□□□ -1.04
MSH4-201ENST00000263187 GDPGP1Q6ZNW5 385 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 UBE2Q1Q7Z7E8 422 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 TMEM99Q8N816 258 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 OR51A7Q8NH64 312 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 PFN4Q8NHR9 129 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 ORAI1Q96D31 301 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 PAWRQ96IZ0 340 aaKnown RBP8.54□□□□□ -1.04
MSH4-201ENST00000263187 MSLNLQ96KJ4 702 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 QRFPRQ96P65 431 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 SNX18Q96RF0 628 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 SLC38A1Q9H2H9 487 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 CDCP1Q9H5V8 836 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 FBXO34Q9NWN3 711 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 TEKT2Q9UIF3 430 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 ACAD8Q9UKU7 415 aa8.54□□□□□ -1.04
MSH4-201ENST00000263187 MTCL1Q9Y4B5 1905 aaKnown RBP8.54□□□□□ -1.04
MSH4-201ENST00000263187 PLXNA2O75051 1894 aa8.53□□□□□ -1.04
MSH4-201ENST00000263187 A0A0A6YYD5 115 aa8.53□□□□□ -1.04
MSH4-201ENST00000263187 EEF1E1O43324 174 aaKnown RBP8.53□□□□□ -1.04
MSH4-201ENST00000263187 ASGR2P07307 311 aa8.53□□□□□ -1.04
MSH4-201ENST00000263187 HIST1H1TP22492 207 aaPredicted RBP8.53□□□□□ -1.04
MSH4-201ENST00000263187 MAPK9P45984 424 aa8.53□□□□□ -1.04
MSH4-201ENST00000263187 AGFG1P52594 562 aaKnown RBP8.53□□□□□ -1.04
MSH4-201ENST00000263187 RAB40BQ12829 278 aa8.53□□□□□ -1.04
MSH4-201ENST00000263187 ZNF628Q5EBL2 1059 aa8.53□□□□□ -1.04
MSH4-201ENST00000263187 C3orf38Q5JPI3 329 aa8.53□□□□□ -1.04
MSH4-201ENST00000263187 BCL2L15Q5TBC7 163 aa8.53□□□□□ -1.04
MSH4-201ENST00000263187 IZUMO1Q8IYV9 350 aa8.53□□□□□ -1.04
MSH4-201ENST00000263187 SAMD12Q8N8I0 201 aa8.53□□□□□ -1.04
MSH4-201ENST00000263187 BEST4Q8NFU0 473 aa8.53□□□□□ -1.04
MSH4-201ENST00000263187 PIGXQ8TBF5 258 aa8.53□□□□□ -1.04
MSH4-201ENST00000263187 ADAMTS15Q8TE58 950 aa8.53□□□□□ -1.04
MSH4-201ENST00000263187 GRHL3Q8TE85 626 aa8.53□□□□□ -1.04
MSH4-201ENST00000263187 RASSF5Q8WWW0 418 aa8.53□□□□□ -1.04
MSH4-201ENST00000263187 RNF170Q96K19 258 aa8.53□□□□□ -1.04
MSH4-201ENST00000263187 ZNF514Q96K75 400 aaPredicted RBP8.53□□□□□ -1.04
MSH4-201ENST00000263187 DHRS1Q96LJ7 313 aa8.53□□□□□ -1.04
MSH4-201ENST00000263187 ZFP3Q96NJ6 502 aa8.53□□□□□ -1.04
MSH4-201ENST00000263187 CAMK1GQ96NX5 476 aa8.53□□□□□ -1.04
MSH4-201ENST00000263187 ARHGAP9Q9BRR9 750 aa8.53□□□□□ -1.04
MSH4-201ENST00000263187 MENTQ9BUN1 341 aa8.53□□□□□ -1.04
MSH4-201ENST00000263187 RNF32Q9H0A6 362 aa8.53□□□□□ -1.04
MSH4-201ENST00000263187 EPHX3Q9H6B9 360 aa8.53□□□□□ -1.04
MSH4-201ENST00000263187 ADAP2Q9NPF8 381 aa8.53□□□□□ -1.04
MSH4-201ENST00000263187 C20orf141Q9NUB4 165 aa8.53□□□□□ -1.04
MSH4-201ENST00000263187 UCKL1Q9NWZ5 548 aa8.53□□□□□ -1.04
MSH4-201ENST00000263187 MRPL15Q9P015 296 aaKnown RBP8.53□□□□□ -1.04
MSH4-201ENST00000263187 ZNF624Q9P2J8 865 aaPredicted RBP8.53□□□□□ -1.04
MSH4-201ENST00000263187 GPR34Q9UPC5 381 aa8.53□□□□□ -1.04
MSH4-201ENST00000263187 BTN3A3O00478 584 aa8.53□□□□□ -1.04
MSH4-201ENST00000263187 SLC34A2O95436 690 aa8.53□□□□□ -1.04
MSH4-201ENST00000263187 ACADMP11310 421 aa8.53□□□□□ -1.04
MSH4-201ENST00000263187 GABRA5P31644 462 aa8.53□□□□□ -1.04
MSH4-201ENST00000263187 PRDX1Q06830 199 aaKnown RBP8.53□□□□□ -1.04
MSH4-201ENST00000263187 COX10Q12887 443 aa8.53□□□□□ -1.04
MSH4-201ENST00000263187 ZNF155Q12901 538 aaPredicted RBP8.53□□□□□ -1.04
MSH4-201ENST00000263187 TMEM31Q5JXX7 168 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms