RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 A0A1W2PQU0 124 aa21.16■□□□□ 0.98
MCF2L-201ENST00000261963 SLC43A1O75387 559 aa21.16■□□□□ 0.98
MCF2L-201ENST00000261963 AIFM1O95831 613 aa21.16■□□□□ 0.98
MCF2L-201ENST00000261963 HMGN2P05204 90 aaKnown RBP21.16■□□□□ 0.98
MCF2L-201ENST00000261963 MSL3P1P0C860 447 aa21.16■□□□□ 0.98
MCF2L-201ENST00000261963 EVI2BP34910 448 aa21.16■□□□□ 0.98
MCF2L-201ENST00000261963 PER3P56645 1201 aa21.16■□□□□ 0.98
MCF2L-201ENST00000261963 ERVK-21P61565 698 aa21.16■□□□□ 0.98
MCF2L-201ENST00000261963 RPS21P63220 83 aaKnown RBP21.16■□□□□ 0.98
MCF2L-201ENST00000261963 SGCGQ13326 291 aa21.16■□□□□ 0.98
MCF2L-201ENST00000261963 UAP1L1Q3KQV9 507 aa21.16■□□□□ 0.98
MCF2L-201ENST00000261963 MEDAGQ5VYS4 303 aa21.16■□□□□ 0.98
MCF2L-201ENST00000261963 KIAA1211LQ6NV74 962 aa21.16■□□□□ 0.98
MCF2L-201ENST00000261963 ZER1Q7Z7L7 766 aa21.16■□□□□ 0.98
MCF2L-201ENST00000261963 PHC2Q8IXK0 858 aa21.16■□□□□ 0.98
MCF2L-201ENST00000261963 YAF2Q8IY57 180 aa21.16■□□□□ 0.98
MCF2L-201ENST00000261963 CCDC116Q8IYX3 515 aa21.16■□□□□ 0.98
MCF2L-201ENST00000261963 OR8H3Q8N146 312 aa21.16■□□□□ 0.98
MCF2L-201ENST00000261963 IQCF1Q8N6M8 205 aa21.16■□□□□ 0.98
MCF2L-201ENST00000261963 AKAP1Q92667 903 aaKnown RBP eCLIP21.16■□□□□ 0.98
MCF2L-201ENST00000261963 GFM1Q96RP9 751 aaKnown RBP21.16■□□□□ 0.98
MCF2L-201ENST00000261963 TMEM106CQ9BVX2 250 aa21.16■□□□□ 0.98
MCF2L-201ENST00000261963 COQ3Q9NZJ6 369 aa21.16■□□□□ 0.98
MCF2L-201ENST00000261963 ELF5Q9UKW6 265 aaPredicted RBP21.16■□□□□ 0.98
MCF2L-201ENST00000261963 CES1P1Q9UKY3 287 aa21.16■□□□□ 0.98
MCF2L-201ENST00000261963 LYRM1O43325 122 aa21.16■□□□□ 0.98
MCF2L-201ENST00000261963 NME6O75414 186 aaPredicted RBP21.16■□□□□ 0.98
MCF2L-201ENST00000261963 APEX1P27695 318 aaKnown RBP21.16■□□□□ 0.98
MCF2L-201ENST00000261963 LIPKQ5VXJ0 399 aa21.16■□□□□ 0.98
MCF2L-201ENST00000261963 C18orf63Q68DL7 685 aa21.16■□□□□ 0.98
MCF2L-201ENST00000261963 Q8N402 240 aa21.16■□□□□ 0.98
MCF2L-201ENST00000261963 C16orf58Q96GQ5 468 aa21.16■□□□□ 0.98
MCF2L-201ENST00000261963 GPA33Q99795 319 aa21.16■□□□□ 0.98
MCF2L-201ENST00000261963 MARVELD1Q9BSK0 173 aa21.16■□□□□ 0.98
MCF2L-201ENST00000261963 FBXW2Q9UKT8 454 aa21.16■□□□□ 0.98
MCF2L-201ENST00000261963 KCNE3Q9Y6H6 103 aa21.16■□□□□ 0.98
MCF2L-201ENST00000261963 XIRP2A4UGR9 3374 aa21.16■□□□□ 0.98
MCF2L-201ENST00000261963 C8orf89P0DMQ9 161 aa21.15■□□□□ 0.98
MCF2L-201ENST00000261963 MMP11P24347 488 aa21.15■□□□□ 0.98
MCF2L-201ENST00000261963 CERS1P27544 350 aa21.15■□□□□ 0.98
MCF2L-201ENST00000261963 SEC13P55735 322 aa21.15■□□□□ 0.98
MCF2L-201ENST00000261963 MLLT11Q13015 90 aaPredicted RBP21.15■□□□□ 0.98
MCF2L-201ENST00000261963 C1DQ13901 141 aaKnown RBP21.15■□□□□ 0.98
MCF2L-201ENST00000261963 NCF4Q15080 339 aa21.15■□□□□ 0.98
MCF2L-201ENST00000261963 RPE65Q16518 533 aa21.15■□□□□ 0.98
MCF2L-201ENST00000261963 ZNF628Q5EBL2 1059 aa21.15■□□□□ 0.98
MCF2L-201ENST00000261963 FAM122CQ6P4D5 195 aa21.15■□□□□ 0.98
MCF2L-201ENST00000261963 TEX261Q6UWH6 196 aa21.15■□□□□ 0.98
MCF2L-201ENST00000261963 CASP12Q6UXS9 341 aa21.15■□□□□ 0.98
MCF2L-201ENST00000261963 TCEANCQ8N8B7 351 aa21.15■□□□□ 0.98
MCF2L-201ENST00000261963 TMEM145Q8NBT3 493 aa21.15■□□□□ 0.98
MCF2L-201ENST00000261963 SLC37A3Q8NCC5 494 aa21.15■□□□□ 0.98
MCF2L-201ENST00000261963 OR2L5Q8NG80 312 aa21.15■□□□□ 0.98
MCF2L-201ENST00000261963 OR8J1Q8NGP2 316 aa21.15■□□□□ 0.98
MCF2L-201ENST00000261963 SFXN5Q8TD22 340 aa21.15■□□□□ 0.98
MCF2L-201ENST00000261963 GPR137Q96N19 417 aa21.15■□□□□ 0.98
MCF2L-201ENST00000261963 SLC17A9Q9BYT1 436 aa21.15■□□□□ 0.98
MCF2L-201ENST00000261963 GALNT9Q9HCQ5 603 aa21.15■□□□□ 0.98
MCF2L-201ENST00000261963 U3KQ87 197 aa21.15■□□□□ 0.98
MCF2L-201ENST00000261963 TRIM77I1YAP6 450 aa21.15■□□□□ 0.98
MCF2L-201ENST00000261963 HBQ1P09105 142 aa21.15■□□□□ 0.98
MCF2L-201ENST00000261963 FAM157BP0CG42 384 aa21.15■□□□□ 0.98
MCF2L-201ENST00000261963 AHRP35869 848 aa21.15■□□□□ 0.98
MCF2L-201ENST00000261963 ABATP80404 500 aa21.15■□□□□ 0.98
MCF2L-201ENST00000261963 ZNF91Q05481 1191 aa21.15■□□□□ 0.98
MCF2L-201ENST00000261963 RGS1Q08116 209 aa21.15■□□□□ 0.98
MCF2L-201ENST00000261963 ZNF776Q68DI1 518 aaPredicted RBP21.15■□□□□ 0.98
MCF2L-201ENST00000261963 CD300LDQ6UXZ3 194 aa21.15■□□□□ 0.98
MCF2L-201ENST00000261963 NANOGP1Q8N7R0 232 aa21.15■□□□□ 0.98
MCF2L-201ENST00000261963 MORN4Q8NDC4 146 aa21.15■□□□□ 0.98
MCF2L-201ENST00000261963 OR4K5Q8NGD3 323 aa21.15■□□□□ 0.98
MCF2L-201ENST00000261963 AP3S1Q92572 193 aa21.15■□□□□ 0.98
MCF2L-201ENST00000261963 FNDC11Q9BVV2 318 aa21.15■□□□□ 0.98
MCF2L-201ENST00000261963 SARGQ9BW04 601 aa21.15■□□□□ 0.98
MCF2L-201ENST00000261963 SLC6A17Q9H1V8 727 aa21.15■□□□□ 0.98
MCF2L-201ENST00000261963 APOBEC3BQ9UH17 382 aaKnown RBP21.15■□□□□ 0.98
MCF2L-201ENST00000261963 SLC9A8Q9Y2E8 581 aa21.15■□□□□ 0.98
MCF2L-201ENST00000261963 PCDHGB7Q9Y5F8 929 aa21.15■□□□□ 0.98
MCF2L-201ENST00000261963 ATG2BQ96BY7 2078 aa21.14■□□□□ 0.98
MCF2L-201ENST00000261963 ALDH6A1Q02252 535 aaKnown RBP21.14■□□□□ 0.97
MCF2L-201ENST00000261963 C22orf42Q6IC83 251 aa21.14■□□□□ 0.97
MCF2L-201ENST00000261963 TMEM107Q6UX40 140 aa21.14■□□□□ 0.97
MCF2L-201ENST00000261963 OR14C36Q8NHC7 312 aa21.14■□□□□ 0.97
MCF2L-201ENST00000261963 GANCQ8TET4 914 aa21.14■□□□□ 0.97
MCF2L-201ENST00000261963 MTIF3Q9H2K0 278 aaKnown RBP21.14■□□□□ 0.97
MCF2L-201ENST00000261963 BET1O15155 118 aa21.14■□□□□ 0.97
MCF2L-201ENST00000261963 KIR2DL1P43626 348 aaPredicted RBP21.14■□□□□ 0.97
MCF2L-201ENST00000261963 RAB8AP61006 207 aa21.14■□□□□ 0.97
MCF2L-201ENST00000261963 ANKRD54Q6NXT1 300 aa21.14■□□□□ 0.97
MCF2L-201ENST00000261963 IQCHQ86VS3 1027 aa21.14■□□□□ 0.97
MCF2L-201ENST00000261963 TSSK6Q9BXA6 273 aa21.14■□□□□ 0.97
MCF2L-201ENST00000261963 QRSL1Q9H0R6 528 aaKnown RBP21.14■□□□□ 0.97
MCF2L-201ENST00000261963 PPIL3Q9H2H8 161 aaKnown RBP21.14■□□□□ 0.97
MCF2L-201ENST00000261963 RABL2AQ9UBK7 228 aaPredicted RBP21.14■□□□□ 0.97
MCF2L-201ENST00000261963 PRKYO43930 277 aa21.13■□□□□ 0.97
MCF2L-201ENST00000261963 F3P13726 295 aa21.13■□□□□ 0.97
MCF2L-201ENST00000261963 ATF4P18848 351 aaPredicted RBP21.13■□□□□ 0.97
MCF2L-201ENST00000261963 GDI1P31150 447 aa21.13■□□□□ 0.97
MCF2L-201ENST00000261963 MAT2AP31153 395 aaKnown RBP21.13■□□□□ 0.97
MCF2L-201ENST00000261963 SDC2P34741 201 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms