RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 FOLH1BQ9HBA9 442 aa10.66□□□□□ -0.7
PFDN1-201ENST00000261813 ZCCHC3Q9NUD5 404 aaKnown RBP10.66□□□□□ -0.7
PFDN1-201ENST00000261813 CMTM6Q9NX76 183 aa10.66□□□□□ -0.7
PFDN1-201ENST00000261813 LUZP4Q9P127 313 aa10.66□□□□□ -0.7
PFDN1-201ENST00000261813 CD300AQ9UGN4 299 aa10.66□□□□□ -0.7
PFDN1-201ENST00000261813 FAF1Q9UNN5 650 aaPredicted RBP10.66□□□□□ -0.7
PFDN1-201ENST00000261813 CFL2Q9Y281 166 aa10.66□□□□□ -0.7
PFDN1-201ENST00000261813 RRP15Q9Y3B9 282 aaKnown RBP10.66□□□□□ -0.7
PFDN1-201ENST00000261813 PCDHGB3Q9Y5G1 929 aa10.66□□□□□ -0.7
PFDN1-201ENST00000261813 NAV2Q8IVL1 2488 aa10.66□□□□□ -0.7
PFDN1-201ENST00000261813 CROCCQ5TZA2 2017 aa10.66□□□□□ -0.7
PFDN1-201ENST00000261813 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.65□□□□□ -0.7
PFDN1-201ENST00000261813 CYSRT1A8MQ03 144 aa10.65□□□□□ -0.7
PFDN1-201ENST00000261813 FAM220BPB1ANY3 271 aa10.65□□□□□ -0.7
PFDN1-201ENST00000261813 NME4O00746 187 aa10.65□□□□□ -0.7
PFDN1-201ENST00000261813 OR6B1O95007 311 aa10.65□□□□□ -0.7
PFDN1-201ENST00000261813 THBS1P07996 1170 aa10.65□□□□□ -0.7
PFDN1-201ENST00000261813 CT45A8P0DMV1 189 aa10.65□□□□□ -0.7
PFDN1-201ENST00000261813 CT45A9P0DMV2 189 aa10.65□□□□□ -0.7
PFDN1-201ENST00000261813 HOXB6P17509 224 aaKnown RBP10.65□□□□□ -0.7
PFDN1-201ENST00000261813 CYB561P49447 251 aa10.65□□□□□ -0.7
PFDN1-201ENST00000261813 MTPNP58546 118 aa10.65□□□□□ -0.7
PFDN1-201ENST00000261813 OC90Q02509 493 aaPredicted RBP10.65□□□□□ -0.7
PFDN1-201ENST00000261813 CEACAM7Q14002 265 aa10.65□□□□□ -0.7
PFDN1-201ENST00000261813 RGNQ15493 299 aa10.65□□□□□ -0.7
PFDN1-201ENST00000261813 OR1C1Q15619 314 aa10.65□□□□□ -0.7
PFDN1-201ENST00000261813 CYP51A1Q16850 503 aa10.65□□□□□ -0.7
PFDN1-201ENST00000261813 PLEKHN1Q494U1 663 aaPredicted RBP10.65□□□□□ -0.7
PFDN1-201ENST00000261813 CT45A2Q5DJT8 189 aa10.65□□□□□ -0.7
PFDN1-201ENST00000261813 RABL3Q5HYI8 236 aa10.65□□□□□ -0.7
PFDN1-201ENST00000261813 C1orf146Q5VVC0 180 aa10.65□□□□□ -0.7
PFDN1-201ENST00000261813 HLA-DQA1Q5Y7H0 255 aa10.65□□□□□ -0.7
PFDN1-201ENST00000261813 SAXO2Q658L1 398 aa10.65□□□□□ -0.7
PFDN1-201ENST00000261813 SPINK14Q6IE38 97 aa10.65□□□□□ -0.7
PFDN1-201ENST00000261813 NPSR1Q6W5P4 371 aa10.65□□□□□ -0.7
PFDN1-201ENST00000261813 TMEM156Q8N614 296 aa10.65□□□□□ -0.7
PFDN1-201ENST00000261813 C17orf47Q8NEP4 570 aa10.65□□□□□ -0.7
PFDN1-201ENST00000261813 NUP43Q8NFH3 380 aa10.65□□□□□ -0.7
PFDN1-201ENST00000261813 OR10A6Q8NH74 314 aa10.65□□□□□ -0.7
PFDN1-201ENST00000261813 ASB15Q8WXK1 588 aa10.65□□□□□ -0.7
PFDN1-201ENST00000261813 PNPLA2Q96AD5 504 aa10.65□□□□□ -0.7
PFDN1-201ENST00000261813 GIMAP5Q96F15 307 aa10.65□□□□□ -0.7
PFDN1-201ENST00000261813 REXO5Q96IC2 774 aaKnown RBP10.65□□□□□ -0.7
PFDN1-201ENST00000261813 LCORQ96JN0 433 aaPredicted RBP10.65□□□□□ -0.7
PFDN1-201ENST00000261813 LRGUKQ96M69 825 aa10.65□□□□□ -0.7
PFDN1-201ENST00000261813 HES7Q9BYE0 225 aa10.65□□□□□ -0.7
PFDN1-201ENST00000261813 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.65□□□□□ -0.7
PFDN1-201ENST00000261813 LRFN1Q9P244 771 aa10.65□□□□□ -0.7
PFDN1-201ENST00000261813 SLC7A8Q9UHI5 535 aa10.65□□□□□ -0.7
PFDN1-201ENST00000261813 MAGEL2Q9UJ55 1249 aa10.65□□□□□ -0.7
PFDN1-201ENST00000261813 B3GNT3Q9Y2A9 372 aa10.65□□□□□ -0.7
PFDN1-201ENST00000261813 BOD1L1Q8NFC6 3051 aa10.65□□□□□ -0.7
PFDN1-201ENST00000261813 TRAV17A0A0B4J275 112 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 ELOVL7A1L3X0 281 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 PRORSD1PA6NEY8 169 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 A8MVJ9 347 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 GSTA4O15217 222 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 ASNA1O43681 348 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 SORBS2O94875 1100 aaKnown RBP10.65□□□□□ -0.71
PFDN1-201ENST00000261813 CASRP41180 1078 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 CRATP43155 626 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 PPICP45877 212 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 GSK3BP49841 420 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 KHKP50053 298 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 PRKAG1P54619 331 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 DCAF7P61962 342 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 PSG6Q00889 435 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 ZNF155Q12901 538 aaPredicted RBP10.65□□□□□ -0.71
PFDN1-201ENST00000261813 GAB1Q13480 694 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 VEZF1Q14119 521 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 ZNF169Q14929 603 aaPredicted RBP10.65□□□□□ -0.71
PFDN1-201ENST00000261813 ZNF630Q2M218 657 aaPredicted RBP10.65□□□□□ -0.71
PFDN1-201ENST00000261813 GTDC1Q4AE62 458 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 MTX3Q5HYI7 312 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 INTS11Q5TA45 600 aaKnown RBP10.65□□□□□ -0.71
PFDN1-201ENST00000261813 IL20RBQ6UXL0 311 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 WDR53Q7Z5U6 358 aaPredicted RBP10.65□□□□□ -0.71
PFDN1-201ENST00000261813 DHFR2Q86XF0 187 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 CALHM3Q86XJ0 350 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 PRR22Q8IZ63 422 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 TAGAPQ8N103 731 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 CYP4Z2PQ8N1L4 340 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 SLC15A4Q8N697 577 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 C11orf65Q8NCR3 313 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 SLC22A8Q8TCC7 542 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 MIPOL1Q8TD10 442 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 JADE3Q92613 823 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 SLC35G5Q96KT7 338 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 ZNF583Q96ND8 569 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 MS4A4EQ96PG1 132 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 BTBD9Q96Q07 612 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 ACTRT3Q9BYD9 372 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 TMEM38AQ9H6F2 299 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 SLC6A13Q9NSD5 602 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 HPF1Q9NWY4 346 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 GIN1Q9NXP7 522 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 ACTR3BQ9P1U1 418 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 POMPQ9Y244 141 aa10.65□□□□□ -0.71
PFDN1-201ENST00000261813 GPR55Q9Y2T6 319 aaPredicted RBP10.65□□□□□ -0.71
PFDN1-201ENST00000261813 SPTA1P02549 2419 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms