RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 C1orf74Q96LT6 269 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 SLC25A18Q9H1K4 315 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 TESQ9UGI8 421 aaKnown RBP13.53□□□□□ -0.24
CUX2-201ENST00000261726 CD300LBA8K4G0 201 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 SLC22A5O76082 557 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 APBB3O95704 486 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 RPS17P08708 135 aaKnown RBP13.53□□□□□ -0.24
CUX2-201ENST00000261726 ZNF28P17035 718 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 ZMYND19Q96E35 227 aaPredicted RBP13.53□□□□□ -0.24
CUX2-201ENST00000261726 FOLH1BQ9HBA9 442 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 STARD5Q9NSY2 213 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 TEX10Q9NXF1 929 aaPredicted RBP13.53□□□□□ -0.24
CUX2-201ENST00000261726 MAGED1Q9Y5V3 778 aaPredicted RBP13.53□□□□□ -0.24
CUX2-201ENST00000261726 PRAMEF2O60811 474 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 OPN1LWP04000 364 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 ARAFP10398 606 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 GJA5P36382 358 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 BMXP51813 675 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 CST6Q15828 149 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 KBTBD6Q86V97 674 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 MEX3DQ86XN8 651 aaKnown RBP13.53□□□□□ -0.24
CUX2-201ENST00000261726 OR4K15Q8NH41 348 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 DEDD2Q8WXF8 326 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 AK6Q9Y3D8 172 aaKnown RBP13.53□□□□□ -0.24
CUX2-201ENST00000261726 BCL9LQ86UU0 1499 aa13.52□□□□□ -0.24
CUX2-201ENST00000261726 COL18A1P39060 1754 aa13.52□□□□□ -0.24
CUX2-201ENST00000261726 ANKRD30BLA7E2S9 258 aa13.52□□□□□ -0.24
CUX2-201ENST00000261726 CAPNS1P04632 268 aa13.52□□□□□ -0.24
CUX2-201ENST00000261726 BMP4P12644 408 aa13.52□□□□□ -0.24
CUX2-201ENST00000261726 EVI2BP34910 448 aa13.52□□□□□ -0.24
CUX2-201ENST00000261726 RNF4P78317 190 aa13.52□□□□□ -0.24
CUX2-201ENST00000261726 UPP1Q16831 310 aa13.52□□□□□ -0.24
CUX2-201ENST00000261726 HAS2Q92819 552 aa13.52□□□□□ -0.24
CUX2-201ENST00000261726 SFXN2Q96NB2 322 aa13.52□□□□□ -0.24
CUX2-201ENST00000261726 FEVQ99581 238 aa13.52□□□□□ -0.24
CUX2-201ENST00000261726 CNR2P34972 360 aa13.52□□□□□ -0.24
CUX2-201ENST00000261726 ZNF33AQ06730 810 aa13.52□□□□□ -0.24
CUX2-201ENST00000261726 KIAA1211LQ6NV74 962 aa13.52□□□□□ -0.24
CUX2-201ENST00000261726 BPHLQ86WA6 291 aaPredicted RBP13.52□□□□□ -0.24
CUX2-201ENST00000261726 MTMR14Q8NCE2 650 aa13.52□□□□□ -0.24
CUX2-201ENST00000261726 IMP4Q96G21 291 aaKnown RBP13.52□□□□□ -0.24
CUX2-201ENST00000261726 UBXN10Q96LJ8 280 aa13.52□□□□□ -0.24
CUX2-201ENST00000261726 AIG1Q9NVV5 245 aa13.52□□□□□ -0.24
CUX2-201ENST00000261726 MITFO75030 526 aaPredicted RBP13.52□□□□□ -0.25
CUX2-201ENST00000261726 TFP02787 698 aa13.52□□□□□ -0.25
CUX2-201ENST00000261726 PFKMP08237 780 aa13.52□□□□□ -0.25
CUX2-201ENST00000261726 MAOAP21397 527 aa13.52□□□□□ -0.25
CUX2-201ENST00000261726 ERVK-25P63136 954 aa13.52□□□□□ -0.25
CUX2-201ENST00000261726 ZNF423Q2M1K9 1284 aa13.52□□□□□ -0.25
CUX2-201ENST00000261726 TLDC1Q6P9B6 456 aa13.52□□□□□ -0.25
CUX2-201ENST00000261726 ZNF551Q7Z340 670 aaPredicted RBP13.52□□□□□ -0.25
CUX2-201ENST00000261726 APCDD1Q8J025 514 aa13.52□□□□□ -0.25
CUX2-201ENST00000261726 CYB561A3Q8NBI2 242 aa13.52□□□□□ -0.25
CUX2-201ENST00000261726 SNX18Q96RF0 628 aa13.52□□□□□ -0.25
CUX2-201ENST00000261726 LPAR4Q99677 370 aa13.52□□□□□ -0.25
CUX2-201ENST00000261726 CNIH4Q9P003 139 aa13.52□□□□□ -0.25
CUX2-201ENST00000261726 MARCH4Q9P2E8 410 aaPredicted RBP13.52□□□□□ -0.25
CUX2-201ENST00000261726 A0A1W2PQL4 384 aaPredicted RBP13.52□□□□□ -0.25
CUX2-201ENST00000261726 ZNF705GA8MUZ8 300 aaPredicted RBP13.52□□□□□ -0.25
CUX2-201ENST00000261726 LILRB3O75022 631 aa13.52□□□□□ -0.25
CUX2-201ENST00000261726 RGS6P49758 472 aa13.52□□□□□ -0.25
CUX2-201ENST00000261726 FAM189BP81408 668 aa13.52□□□□□ -0.25
CUX2-201ENST00000261726 ZNF783Q6ZMS7 281 aa13.52□□□□□ -0.25
CUX2-201ENST00000261726 OR9A4Q8NGU2 314 aa13.52□□□□□ -0.25
CUX2-201ENST00000261726 TRIB3Q96RU7 358 aa13.52□□□□□ -0.25
CUX2-201ENST00000261726 FUNDC2Q9BWH2 189 aa13.52□□□□□ -0.25
CUX2-201ENST00000261726 ACTRT3Q9BYD9 372 aa13.52□□□□□ -0.25
CUX2-201ENST00000261726 Q9Y3F1 56 aa13.52□□□□□ -0.25
CUX2-201ENST00000261726 PAHP00439 452 aa13.52□□□□□ -0.25
CUX2-201ENST00000261726 EDN3P14138 238 aa13.52□□□□□ -0.25
CUX2-201ENST00000261726 UGT2B7P16662 529 aa13.52□□□□□ -0.25
CUX2-201ENST00000261726 OR7A5Q15622 319 aa13.52□□□□□ -0.25
CUX2-201ENST00000261726 NDUFAF5Q5TEU4 345 aa13.52□□□□□ -0.25
CUX2-201ENST00000261726 CDCA2Q69YH5 1023 aaPredicted RBP13.52□□□□□ -0.25
CUX2-201ENST00000261726 OR52B6Q8NGF0 335 aa13.52□□□□□ -0.25
CUX2-201ENST00000261726 ARL11Q969Q4 196 aa13.52□□□□□ -0.25
CUX2-201ENST00000261726 PTERQ96BW5 349 aa13.52□□□□□ -0.25
CUX2-201ENST00000261726 PLCXD1Q9NUJ7 323 aa13.52□□□□□ -0.25
CUX2-201ENST00000261726 FAM189A1O60320 539 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 FAM163BP0C2L3 166 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 ZNF888P0CJ79 500 aaPredicted RBP13.51□□□□□ -0.25
CUX2-201ENST00000261726 TIMP2P16035 220 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 RAB3AP20336 220 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 CHATP28329 748 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 SEC61A1P61619 476 aaKnown RBP13.51□□□□□ -0.25
CUX2-201ENST00000261726 TMEM201Q5SNT2 666 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 VRK1Q99986 396 aaPredicted RBP13.51□□□□□ -0.25
CUX2-201ENST00000261726 CPEB1Q9BZB8 566 aaKnown RBP13.51□□□□□ -0.25
CUX2-201ENST00000261726 CHRNB4P30926 498 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 SLX4IPQ5VYV7 408 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 ANKRD13BQ86YJ7 626 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 ZNF679Q8IYX0 411 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 MKS1Q9NXB0 559 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 IGKV6D-41A0A0C4DH26 115 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 DVL2O14641 736 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 SULT1B1O43704 296 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 S1PR4O95977 384 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 TNFSF4P23510 183 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 PRSS3P35030 304 aa13.51□□□□□ -0.25
CUX2-201ENST00000261726 P2RY14Q15391 338 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms