RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 ABHD13Q7L211 337 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 SLC29A4Q7RTT9 530 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 PIANPQ8IYJ0 282 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 MS4A15Q8N5U1 240 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 OR52P1PQ8NH57 321 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 NR4A3Q92570 626 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 LIN37Q96GY3 246 aaPredicted RBP9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 DGAT2Q96PD7 388 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 KDM4FA0A1W2PPD8 638 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 UBBP0CG47 229 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 UBCP0CG48 685 aaKnown RBP9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 TPT1P13693 172 aaKnown RBP9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 ERVK-21P61565 698 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 KCNC3Q14003 757 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 OXA1LQ15070 435 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 LCN10Q6JVE6 187 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 TTC9BQ8N6N2 239 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 NUP43Q8NFH3 380 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 OR2M2Q96R28 347 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 TCEAL2Q9H3H9 227 aaPredicted RBP9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 C2orf78A6NCI8 922 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 ZNF850A8MQ14 1090 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 J3KTA2 159 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 LEFTY1O75610 366 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 RAB3DO95716 219 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 BPIP17213 487 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 CCKBRP32239 447 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 EIF2DP41214 584 aaKnown RBP9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 MAGEB1P43366 347 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 TCTE1Q5JU00 501 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 DNM1P34Q6PK57 102 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 APOOLQ6UXV4 268 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 P4HA3Q7Z4N8 544 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 MYLIPQ8WY64 445 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 GPR62Q9BZJ7 368 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 TAS2R8Q9NYW2 309 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 ZNF860A6NHJ4 632 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 AP1G1O43747 822 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 PEA15Q15121 130 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 KDELC1Q6UW63 502 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 ELP4Q96EB1 424 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 WDR83Q9BRX9 315 aaKnown RBP9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 NT5DC2Q9H857 520 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 TMEM221A6NGB7 291 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 TMX2-CTNND1H3BSU7 103 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 K7EPK0 472 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 OR7A17O14581 309 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 ACRP10323 421 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 PRSS3P35030 304 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 POU4F2Q12837 409 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 LMAN2Q12907 356 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 TUBB3Q13509 450 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 INAVAQ3KP66 663 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 RAB41Q5JT25 222 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 AVPI1Q5T686 147 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 FAM71E2Q8N5Q1 922 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 ZBTB44Q8NCP5 570 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 TREX1Q9NSU2 369 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 SLC6A5Q9Y345 797 aa9.23□□□□□ -0.93
CTDSPL2-201ENST00000260327 CASC3O15234 703 aaKnown RBP9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 B4GALT2O60909 372 aa9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 ACTBP60709 375 aa9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 ACTG1P63261 375 aa9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 NNATQ16517 81 aa9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 C2orf27AQ580R0 203 aa9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 ZNF551Q7Z340 670 aaPredicted RBP9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 ZER1Q7Z7L7 766 aa9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 TMEM150AQ86TG1 271 aa9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 LRRC46Q96FV0 321 aa9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 FCRL1Q96LA6 429 aa9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 LURAP1Q96LR2 239 aa9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 PKMYT1Q99640 499 aa9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 CORINQ9Y5Q5 1042 aa9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 FZD9O00144 591 aa9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 PRKCAP17252 672 aa9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 CHATP28329 748 aa9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 PSMB10P40306 273 aa9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 CREB3L2Q70SY1 520 aa9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 APCDD1Q8J025 514 aa9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 ZNF300Q96RE9 604 aaPredicted RBP9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 RNF167Q9H6Y7 350 aa9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 SOCS5O75159 536 aa9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 PPP1R3DO95685 299 aa9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 HMGCLP35914 325 aa9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 DDOSTP39656 456 aa9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 DAPP51397 102 aa9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 CXCR4P61073 352 aa9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 NKX3-2P78367 333 aa9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 TDGQ13569 410 aa9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 FAM69AQ5T7M9 428 aa9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 TMEM173Q86WV6 379 aaPredicted RBP9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 MDGA1Q8NFP4 955 aa9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 ELP5Q8TE02 316 aa9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 ZMYND19Q96E35 227 aaPredicted RBP9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 RAB11FIP5Q9BXF6 653 aa9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 Q9N2J8 555 aa9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 NWD2Q9ULI1 1742 aa9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 A8MVJ9 347 aa9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 PRSS44E7EML9 344 aa9.22□□□□□ -0.93
CTDSPL2-201ENST00000260327 FRS3O43559 492 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms