RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 GPR45Q9Y5Y3 372 aa15.42■□□□□ 0.06
SDCBP-201ENST00000260130 BBIP1A8MTZ0 92 aa15.42■□□□□ 0.06
SDCBP-201ENST00000260130 TO15178 435 aa15.42■□□□□ 0.06
SDCBP-201ENST00000260130 NAGAP17050 411 aa15.42■□□□□ 0.06
SDCBP-201ENST00000260130 SRSF11Q05519 484 aaKnown RBP15.42■□□□□ 0.06
SDCBP-201ENST00000260130 RPS6KA2Q15349 733 aa15.42■□□□□ 0.06
SDCBP-201ENST00000260130 NRF1Q16656 503 aa15.42■□□□□ 0.06
SDCBP-201ENST00000260130 SLC22A10Q63ZE4 541 aa15.42■□□□□ 0.06
SDCBP-201ENST00000260130 ZNF324BQ6AW86 544 aaPredicted RBP15.42■□□□□ 0.06
SDCBP-201ENST00000260130 ATCAYQ86WG3 371 aa15.42■□□□□ 0.06
SDCBP-201ENST00000260130 OR8J2Q8NGG1 315 aa15.42■□□□□ 0.06
SDCBP-201ENST00000260130 PAQR8Q8TEZ7 354 aa15.42■□□□□ 0.06
SDCBP-201ENST00000260130 LRTOMTQ8WZ04 291 aa15.42■□□□□ 0.06
SDCBP-201ENST00000260130 TESCQ96BS2 214 aa15.42■□□□□ 0.06
SDCBP-201ENST00000260130 SEMA6AQ9H2E6 1030 aa15.42■□□□□ 0.06
SDCBP-201ENST00000260130 SH2D2AQ9NP31 389 aa15.42■□□□□ 0.06
SDCBP-201ENST00000260130 SACM1LQ9NTJ5 587 aa15.42■□□□□ 0.06
SDCBP-201ENST00000260130 OLAHQ9NV23 265 aa15.42■□□□□ 0.06
SDCBP-201ENST00000260130 NTMQ9P121 344 aa15.42■□□□□ 0.06
SDCBP-201ENST00000260130 SNX13Q9Y5W8 968 aa15.42■□□□□ 0.06
SDCBP-201ENST00000260130 PRORSD1PA6NEY8 169 aa15.41■□□□□ 0.06
SDCBP-201ENST00000260130 P04436 131 aa15.41■□□□□ 0.06
SDCBP-201ENST00000260130 CCL3P10147 92 aa15.41■□□□□ 0.06
SDCBP-201ENST00000260130 IDO1P14902 403 aa15.41■□□□□ 0.06
SDCBP-201ENST00000260130 CNR1P21554 472 aa15.41■□□□□ 0.06
SDCBP-201ENST00000260130 NME5P56597 212 aa15.41■□□□□ 0.06
SDCBP-201ENST00000260130 GPR85P60893 370 aa15.41■□□□□ 0.06
SDCBP-201ENST00000260130 UFM1P61960 85 aa15.41■□□□□ 0.06
SDCBP-201ENST00000260130 ZNF155Q12901 538 aaPredicted RBP15.41■□□□□ 0.06
SDCBP-201ENST00000260130 OR4F3Q6IEY1 312 aa15.41■□□□□ 0.06
SDCBP-201ENST00000260130 DHFR2Q86XF0 187 aa15.41■□□□□ 0.06
SDCBP-201ENST00000260130 GALNT11Q8NCW6 608 aa15.41■□□□□ 0.06
SDCBP-201ENST00000260130 OR10G3Q8NGC4 313 aa15.41■□□□□ 0.06
SDCBP-201ENST00000260130 OR5M3Q8NGP4 307 aa15.41■□□□□ 0.06
SDCBP-201ENST00000260130 FRMD6Q96NE9 622 aa15.41■□□□□ 0.06
SDCBP-201ENST00000260130 CLMPQ9H6B4 373 aa15.41■□□□□ 0.06
SDCBP-201ENST00000260130 DEPPQ9NTK1 212 aa15.41■□□□□ 0.06
SDCBP-201ENST00000260130 TP53I11O14683 189 aa15.41■□□□□ 0.06
SDCBP-201ENST00000260130 EMC8O43402 210 aa15.41■□□□□ 0.06
SDCBP-201ENST00000260130 C6orf47O95873 294 aa15.41■□□□□ 0.06
SDCBP-201ENST00000260130 KIR3DL1P43629 444 aa15.41■□□□□ 0.06
SDCBP-201ENST00000260130 MEOX1P50221 254 aa15.41■□□□□ 0.06
SDCBP-201ENST00000260130 PRKAG1P54619 331 aa15.41■□□□□ 0.06
SDCBP-201ENST00000260130 FBXW4P57775 412 aa15.41■□□□□ 0.06
SDCBP-201ENST00000260130 PSG6Q00889 435 aa15.41■□□□□ 0.06
SDCBP-201ENST00000260130 DPY19L1Q2PZI1 675 aa15.41■□□□□ 0.06
SDCBP-201ENST00000260130 C8orf82Q6P1X6 216 aaPredicted RBP15.41■□□□□ 0.06
SDCBP-201ENST00000260130 NPSR1Q6W5P4 371 aa15.41■□□□□ 0.06
SDCBP-201ENST00000260130 SLC44A2Q8IWA5 706 aaPredicted RBP15.41■□□□□ 0.06
SDCBP-201ENST00000260130 NUP43Q8NFH3 380 aa15.41■□□□□ 0.06
SDCBP-201ENST00000260130 TSPAN14Q8NG11 270 aa15.41■□□□□ 0.06
SDCBP-201ENST00000260130 NR4A3Q92570 626 aa15.41■□□□□ 0.06
SDCBP-201ENST00000260130 TEX37Q96LM6 180 aa15.41■□□□□ 0.06
SDCBP-201ENST00000260130 SIRT3Q9NTG7 399 aaPredicted RBP15.41■□□□□ 0.06
SDCBP-201ENST00000260130 CNIH4Q9P003 139 aa15.41■□□□□ 0.06
SDCBP-201ENST00000260130 CHCHD2Q9Y6H1 151 aaPredicted RBP15.41■□□□□ 0.06
SDCBP-201ENST00000260130 C7orf72A4D263 438 aa15.4■□□□□ 0.06
SDCBP-201ENST00000260130 PPM1BO75688 479 aa15.4■□□□□ 0.06
SDCBP-201ENST00000260130 ABCB1P08183 1280 aaPredicted RBP15.4■□□□□ 0.06
SDCBP-201ENST00000260130 WNT3P56703 355 aa15.4■□□□□ 0.06
SDCBP-201ENST00000260130 PSPHP78330 225 aa15.4■□□□□ 0.06
SDCBP-201ENST00000260130 PLCXD2Q0VAA5 305 aa15.4■□□□□ 0.06
SDCBP-201ENST00000260130 KRT80Q6KB66 452 aa15.4■□□□□ 0.06
SDCBP-201ENST00000260130 SLC34A3Q8N130 599 aa15.4■□□□□ 0.06
SDCBP-201ENST00000260130 POGLUT1Q8NBL1 392 aa15.4■□□□□ 0.06
SDCBP-201ENST00000260130 PSMA8Q8TAA3 256 aa15.4■□□□□ 0.06
SDCBP-201ENST00000260130 SLCO4A1Q96BD0 722 aa15.4■□□□□ 0.06
SDCBP-201ENST00000260130 OMA1Q96E52 524 aa15.4■□□□□ 0.06
SDCBP-201ENST00000260130 SLX1AQ9BQ83 275 aa15.4■□□□□ 0.06
SDCBP-201ENST00000260130 TRIM15Q9C019 465 aa15.4■□□□□ 0.06
SDCBP-201ENST00000260130 SNX8Q9Y5X2 465 aa15.4■□□□□ 0.06
SDCBP-201ENST00000260130 RNASET2O00584 256 aaKnown RBP15.39■□□□□ 0.05
SDCBP-201ENST00000260130 WISP1O95388 367 aa15.39■□□□□ 0.05
SDCBP-201ENST00000260130 H6PDO95479 791 aa15.39■□□□□ 0.05
SDCBP-201ENST00000260130 ZNF23P17027 643 aa15.39■□□□□ 0.05
SDCBP-201ENST00000260130 PRR5P85299 388 aa15.39■□□□□ 0.05
SDCBP-201ENST00000260130 ZNHIT3Q15649 155 aaPredicted RBP15.39■□□□□ 0.05
SDCBP-201ENST00000260130 PDCD4Q53EL6 469 aaKnown RBP15.39■□□□□ 0.05
SDCBP-201ENST00000260130 MTX3Q5HYI7 312 aa15.39■□□□□ 0.05
SDCBP-201ENST00000260130 SPANXN4Q5MJ08 99 aa15.39■□□□□ 0.05
SDCBP-201ENST00000260130 C6orf10Q5SRN2 563 aa15.39■□□□□ 0.05
SDCBP-201ENST00000260130 ANXA8L1Q5VT79 327 aa15.39■□□□□ 0.05
SDCBP-201ENST00000260130 SZRD1Q7Z422 152 aa15.39■□□□□ 0.05
SDCBP-201ENST00000260130 AMIGO2Q86SJ2 522 aa15.39■□□□□ 0.05
SDCBP-201ENST00000260130 CARM1Q86X55 608 aa15.39■□□□□ 0.05
SDCBP-201ENST00000260130 TRIML2Q8N7C3 387 aa15.39■□□□□ 0.05
SDCBP-201ENST00000260130 ZFP62Q8NB50 900 aaPredicted RBP15.39■□□□□ 0.05
SDCBP-201ENST00000260130 VPS37AQ8NEZ2 397 aa15.39■□□□□ 0.05
SDCBP-201ENST00000260130 OR2M7Q8NG81 312 aa15.39■□□□□ 0.05
SDCBP-201ENST00000260130 B4GALNT2Q8NHY0 566 aa15.39■□□□□ 0.05
SDCBP-201ENST00000260130 FAM120BQ96EK7 910 aaKnown RBP15.39■□□□□ 0.05
SDCBP-201ENST00000260130 SECISBP2Q96T21 854 aaKnown RBP15.39■□□□□ 0.05
SDCBP-201ENST00000260130 FAM173AQ9BQD7 235 aa15.39■□□□□ 0.05
SDCBP-201ENST00000260130 NEUROD4Q9HD90 331 aa15.39■□□□□ 0.05
SDCBP-201ENST00000260130 EQTNQ9NQ60 294 aa15.39■□□□□ 0.05
SDCBP-201ENST00000260130 PNPLA3Q9NST1 481 aa15.39■□□□□ 0.05
SDCBP-201ENST00000260130 MYRFQ9Y2G1 1151 aa15.39■□□□□ 0.05
SDCBP-201ENST00000260130 TTC36A6NLP5 189 aa15.39■□□□□ 0.05
SDCBP-201ENST00000260130 G3V3Y1 287 aa15.39■□□□□ 0.05
SDCBP-201ENST00000260130 EDN3P14138 238 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms