RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 CRISP1P54107 249 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 CD83Q01151 205 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 KCNAB1Q14722 419 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 GALNT12Q8IXK2 581 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 LRRC25Q8N386 305 aaPredicted RBP13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 DTX3Q8N9I9 347 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 TRNT1Q96Q11 434 aaKnown RBP13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 FYTTD1Q96QD9 318 aaKnown RBP13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 GSDMCQ9BYG8 508 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 UCK2Q9BZX2 261 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 C8orf33Q9H7E9 229 aaPredicted RBP13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 CACYBPQ9HB71 228 aaKnown RBP13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 ZNF226Q9NYT6 803 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 PRELID1Q9Y255 219 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 SAGE2PA6NJ88 616 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 PRAMEF26H0Y7S4 382 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 EMC8O43402 210 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 KIAA0513O60268 411 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 ENTPD6O75354 484 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 APBB3O95704 486 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 ALPPP05187 535 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 ADORA3P0DMS8 318 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 IFI30P13284 250 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 SOX3P41225 446 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 SLC16A1P53985 500 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 RPL6Q02878 288 aaKnown RBP13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 FUT5Q11128 374 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 EIF2B5Q13144 721 aaKnown RBP13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 LINC00299Q6ZSB3 139 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 GLCCI1Q86VQ1 547 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 SLC35A4Q96G79 324 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 MAP3K3Q99759 626 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 ABCB9Q9NP78 766 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 SNTG1Q9NSN8 517 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 ACSS1Q9NUB1 689 aaPredicted RBP13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 WDR45Q9Y484 360 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 FAM170BA6NMN3 283 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 SERPINI2O75830 405 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 IFNA16P05015 189 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 FZD2Q14332 565 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 BHLHB9Q6PI77 547 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 PLEKHM3Q6ZWE6 761 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 ABI3BPQ7Z7G0 1075 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 LILRB4Q8NHJ6 448 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 GRHL3Q8TE85 626 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 SLC38A3Q99624 504 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 MAT2BQ9NZL9 334 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 SCML1Q9UN30 329 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 C2orf74A8MZ97 194 aa13.68□□□□□ -0.22
TRAFD1-201ENST00000257604 TLR4O00206 839 aa13.68□□□□□ -0.22
TRAFD1-201ENST00000257604 PTTG1O95997 202 aa13.68□□□□□ -0.22
TRAFD1-201ENST00000257604 FOXL2P58012 376 aa13.68□□□□□ -0.22
TRAFD1-201ENST00000257604 KIAA1024LP59773 190 aa13.68□□□□□ -0.22
TRAFD1-201ENST00000257604 TUBA1BP68363 451 aa13.68□□□□□ -0.22
TRAFD1-201ENST00000257604 SNAPC1Q16533 368 aa13.68□□□□□ -0.22
TRAFD1-201ENST00000257604 DUSP5Q16690 384 aa13.68□□□□□ -0.22
TRAFD1-201ENST00000257604 LYPD8Q6UX82 237 aa13.68□□□□□ -0.22
TRAFD1-201ENST00000257604 TUBA1AQ71U36 451 aa13.68□□□□□ -0.22
TRAFD1-201ENST00000257604 SLC46A3Q7Z3Q1 461 aa13.68□□□□□ -0.22
TRAFD1-201ENST00000257604 IPCEF1Q8WWN9 437 aaPredicted RBP13.68□□□□□ -0.22
TRAFD1-201ENST00000257604 DEPDC7Q96QD5 511 aa13.68□□□□□ -0.22
TRAFD1-201ENST00000257604 GPA33Q99795 319 aa13.68□□□□□ -0.22
TRAFD1-201ENST00000257604 TMEM246Q9BRR3 403 aa13.68□□□□□ -0.22
TRAFD1-201ENST00000257604 KCMF1Q9P0J7 381 aa13.68□□□□□ -0.22
TRAFD1-201ENST00000257604 PSORS1C1Q9UIG5 152 aa13.68□□□□□ -0.22
TRAFD1-201ENST00000257604 NOTOA8MTQ0 251 aa13.68□□□□□ -0.22
TRAFD1-201ENST00000257604 PEX12O00623 359 aa13.68□□□□□ -0.22
TRAFD1-201ENST00000257604 NAT2P11245 290 aa13.68□□□□□ -0.22
TRAFD1-201ENST00000257604 RGS6P49758 472 aa13.68□□□□□ -0.22
TRAFD1-201ENST00000257604 RAB25P57735 213 aa13.68□□□□□ -0.22
TRAFD1-201ENST00000257604 SNRPD2P62316 118 aaKnown RBP13.68□□□□□ -0.22
TRAFD1-201ENST00000257604 SLC35F1Q5T1Q4 408 aa13.68□□□□□ -0.22
TRAFD1-201ENST00000257604 AGAP6Q5VW22 663 aa13.68□□□□□ -0.22
TRAFD1-201ENST00000257604 PAQR6Q6TCH4 344 aa13.68□□□□□ -0.22
TRAFD1-201ENST00000257604 COX18Q8N8Q8 333 aa13.68□□□□□ -0.22
TRAFD1-201ENST00000257604 OR4C15Q8NGM1 316 aa13.68□□□□□ -0.22
TRAFD1-201ENST00000257604 OR52P1PQ8NH57 321 aa13.68□□□□□ -0.22
TRAFD1-201ENST00000257604 GAL3ST3Q96A11 431 aa13.68□□□□□ -0.22
TRAFD1-201ENST00000257604 AGAP4Q96P64 663 aa13.68□□□□□ -0.22
TRAFD1-201ENST00000257604 A4GALTQ9NPC4 353 aa13.68□□□□□ -0.22
TRAFD1-201ENST00000257604 MUTYHQ9UIF7 546 aa13.68□□□□□ -0.22
TRAFD1-201ENST00000257604 CARD8Q9Y2G2 431 aa13.68□□□□□ -0.22
TRAFD1-201ENST00000257604 CPMP14384 443 aa13.67□□□□□ -0.22
TRAFD1-201ENST00000257604 GABRA3P34903 492 aa13.67□□□□□ -0.22
TRAFD1-201ENST00000257604 ATP6V1E1P36543 226 aa13.67□□□□□ -0.22
TRAFD1-201ENST00000257604 RABIFP47224 123 aa13.67□□□□□ -0.22
TRAFD1-201ENST00000257604 GINS1Q14691 196 aa13.67□□□□□ -0.22
TRAFD1-201ENST00000257604 NKAIN4Q8IVV8 208 aa13.67□□□□□ -0.22
TRAFD1-201ENST00000257604 DNAJC22Q8N4W6 341 aa13.67□□□□□ -0.22
TRAFD1-201ENST00000257604 GATSQ8NAP1 163 aa13.67□□□□□ -0.22
TRAFD1-201ENST00000257604 CAMKVQ8NCB2 501 aa13.67□□□□□ -0.22
TRAFD1-201ENST00000257604 TP53INP1Q96A56 240 aa13.67□□□□□ -0.22
TRAFD1-201ENST00000257604 ART5Q96L15 291 aa13.67□□□□□ -0.22
TRAFD1-201ENST00000257604 SDHCQ99643 169 aaPredicted RBP13.67□□□□□ -0.22
TRAFD1-201ENST00000257604 GABARAPL1Q9H0R8 117 aa13.67□□□□□ -0.22
TRAFD1-201ENST00000257604 TRPV5Q9NQA5 729 aa13.67□□□□□ -0.22
TRAFD1-201ENST00000257604 CLEC2DQ9UHP7 191 aa13.67□□□□□ -0.22
TRAFD1-201ENST00000257604 DAPP1Q9UN19 280 aa13.67□□□□□ -0.22
TRAFD1-201ENST00000257604 WBP11Q9Y2W2 641 aaKnown RBP13.67□□□□□ -0.22
TRAFD1-201ENST00000257604 MUC22E2RYF6 1773 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms