RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 EXOC3L2Q2M3D2 409 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 PYHIN1Q6K0P9 492 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 CNEP1R1Q8N9A8 125 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 PLEKHM1Q9Y4G2 1056 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 ANKRD31Q8N7Z5 1873 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 ADAP00813 363 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 TPOP07202 933 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 PCGF2P35227 344 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 CDH11P55287 796 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 GFOD2Q3B7J2 385 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 Q7L0L9 218 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 MICU1Q9BPX6 476 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 FGF22Q9HCT0 170 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 POMT2Q9UKY4 750 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 SLC7A7Q9UM01 511 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 MGAT4AQ9UM21 535 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 ANHXE9PGG2 379 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 HOXD4P09016 255 aaPredicted RBP12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 SLC10A1Q14973 349 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 LACTB2Q53H82 288 aaPredicted RBP12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 AURKBQ96GD4 344 aaPredicted RBP12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 MRI1Q9BV20 369 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 RXFP3Q9NSD7 469 aa12.62□□□□□ -0.39
PRPF38A-201ENST00000257181 SLC5A10A0PJK1 596 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 A6NLC8 198 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 DVL2O14641 736 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 EIF5AP63241 154 aaKnown RBP12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 RPL19P84098 196 aaKnown RBP12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 LIMS2Q7Z4I7 341 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 GINS4Q9BRT9 223 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 CD93Q9NPY3 652 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 PROCRQ9UNN8 238 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 R4GN57 208 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 HSPE1-MOB4S4R3N1 261 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 TBX10O75333 385 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 ZNF883P0CG24 379 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 ERFP50548 548 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 NEDD8Q15843 81 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 TECPR1Q7Z6L1 1165 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 INIPQ9NRY2 104 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 PPIL1Q9Y3C6 166 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 ZNF337Q9Y3M9 751 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 ZNF264O43296 627 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 MSS51Q4VC12 460 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 SLX4IPQ5VYV7 408 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 PLCZ1Q86YW0 608 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 STON2Q8WXE9 905 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 NSMAFQ92636 917 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 PDXPQ96GD0 296 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 PDFQ9HBH1 243 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 MEPEQ9NQ76 525 aaPredicted RBP12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 CCM2LQ9NUG4 571 aaPredicted RBP12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 DLGAP2Q9P1A6 1054 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 ABRACLQ9P1F3 81 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 B3GAT1Q9P2W7 334 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 HCRTR1O43613 425 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 CISD3P0C7P0 127 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 APOBEC1P41238 236 aaKnown RBP12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 SPIN3Q5JUX0 258 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 IL20RBQ6UXL0 311 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 ZNF433Q8N7K0 673 aaPredicted RBP12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 OR4K1Q8NGD4 311 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 ASB5Q8WWX0 329 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 TTC9Q92623 222 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 MS4A8Q9BY19 250 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 CA5BQ9Y2D0 317 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 A0A1W2PRQ8 180 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 BTBD17A6NE02 478 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 ZNF587BE7ETH6 402 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 H0Y8X5 98 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 H3BML4 177 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 LHCGRP22888 699 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 DPP4P27487 766 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 TRHRP34981 398 aaPredicted RBP12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 BCL6P41182 706 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 ST3GAL4Q11206 333 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 SHQ1Q6PI26 577 aaKnown RBP12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 GALNT6Q8NCL4 622 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 GCDHQ92947 438 aaPredicted RBP12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 ERMAPQ96PL5 475 aaPredicted RBP12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 CNN2Q99439 309 aaKnown RBP12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 PKMYT1Q99640 499 aa12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 NOSIPQ9Y314 301 aaKnown RBP12.61□□□□□ -0.39
PRPF38A-201ENST00000257181 NKX6-3A6NJ46 265 aa12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 CD1CP29017 333 aa12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 GSK3BP49841 420 aa12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 ZIK1Q3SY52 487 aaPredicted RBP12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 SLC2A7Q6PXP3 512 aa12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 SATL1Q86VE3 508 aa12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 APOBEC4Q8WW27 367 aaKnown RBP12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 ASB17Q8WXJ9 295 aa12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 SLC41A3Q96GZ6 507 aa12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 MT-ATP6P00846 226 aa12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 TUBA3CQ13748 450 aa12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 CTSL3PQ5NE16 218 aa12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 PMS2CLQ68D20 193 aa12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 SLC25A25Q6KCM7 469 aa12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 KIAA1211LQ6NV74 962 aa12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 AQP11Q8NBQ7 271 aa12.6□□□□□ -0.39
PRPF38A-201ENST00000257181 NT5CQ8TCD5 201 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms