RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 OMPP47874 163 aa17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 SMSP52788 366 aa17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 RAB15P59190 212 aa17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 SHC2P98077 582 aa17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 EFNB1P98172 346 aa17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 ZNF836Q6ZNA1 936 aa17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 PLEKHM3Q6ZWE6 761 aa17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 ABHD13Q7L211 337 aa17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 SPEM1Q8N4L4 309 aa17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 LINC00471Q8N535 108 aa17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 OR52I1Q8NGK6 324 aa17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 TEX47Q8TBZ9 253 aa17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 SLC37A2Q8TED4 501 aa17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 TMEM255BQ8WV15 326 aa17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 ARSGQ96EG1 525 aa17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 CNPPD1Q9BV87 410 aa17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 NXF2Q9GZY0 626 aaKnown RBP17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 EXOSC4Q9NPD3 245 aaKnown RBP17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 FBXO34Q9NWN3 711 aa17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 CCDC59Q9P031 241 aaKnown RBP17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 NTMQ9P121 344 aa17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 IL20RAQ9UHF4 553 aa17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 WDR45Q9Y484 360 aa17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 LRP4O75096 1905 aa17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 CH25HO95992 272 aa17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 TLX1P31314 330 aaPredicted RBP17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 ETV5P41161 510 aa17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 ETV1P50549 477 aa17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 C1orf61Q13536 156 aa17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 GPR68Q15743 365 aa17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 ZNF628Q5EBL2 1059 aa17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 NIPAL1Q6NVV3 410 aa17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 NANOGP1Q8N7R0 232 aa17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 CAMKVQ8NCB2 501 aa17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 PIK3R3Q92569 461 aa17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 RERGQ96A58 199 aaPredicted RBP17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 MCHR1Q99705 422 aa17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 ORAI3Q9BRQ5 295 aa17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 MND1Q9BWT6 205 aa17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 CHRDQ9H2X0 955 aa17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 ANKHQ9HCJ1 492 aa17.44■□□□□ 0.38
PDLIM4-201ENST00000253754 NPIPA5A0A0B4J1W7 369 aa17.43■□□□□ 0.38
PDLIM4-201ENST00000253754 DUXAA6NLW8 204 aa17.43■□□□□ 0.38
PDLIM4-201ENST00000253754 NPIPA7E9PJI5 369 aa17.43■□□□□ 0.38
PDLIM4-201ENST00000253754 NPIPA8P0DM63 369 aa17.43■□□□□ 0.38
PDLIM4-201ENST00000253754 PORP16435 677 aaPredicted RBP17.43■□□□□ 0.38
PDLIM4-201ENST00000253754 GSTM3P21266 225 aa17.43■□□□□ 0.38
PDLIM4-201ENST00000253754 PPP5CP53041 499 aa17.43■□□□□ 0.38
PDLIM4-201ENST00000253754 ST3GAL3Q11203 375 aa17.43■□□□□ 0.38
PDLIM4-201ENST00000253754 MAPK14Q16539 360 aa17.43■□□□□ 0.38
PDLIM4-201ENST00000253754 USP53Q70EK8 1073 aa17.43■□□□□ 0.38
PDLIM4-201ENST00000253754 SHFQ7M4L6 423 aa17.43■□□□□ 0.38
PDLIM4-201ENST00000253754 GDF7Q7Z4P5 450 aa17.43■□□□□ 0.38
PDLIM4-201ENST00000253754 BAHD1Q8TBE0 780 aaPredicted RBP17.43■□□□□ 0.38
PDLIM4-201ENST00000253754 GNPDA2Q8TDQ7 276 aa17.43■□□□□ 0.38
PDLIM4-201ENST00000253754 ABCB10Q9NRK6 738 aa17.43■□□□□ 0.38
PDLIM4-201ENST00000253754 SPTY2D1-AS1A0A0U1RR47 76 aa17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 URADA6NGE7 173 aa17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 C19orf67A6NJJ6 358 aa17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 C2orf74A8MZ97 194 aa17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 AP3D1O14617 1153 aa17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 UBXN7O94888 489 aa17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 TNFP01375 233 aa17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 GNSP15586 552 aa17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 TYRP1P17643 537 aa17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 TGM1P22735 817 aa17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 UBE2IP63279 158 aaKnown RBP17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 TSPAN31Q12999 210 aa17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 SRSF5Q13243 272 aaKnown RBP17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 DEFB110Q30KQ9 67 aa17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 FLYWCH1Q4VC44 716 aa17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 LIPKQ5VXJ0 399 aa17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 SLC30A6Q6NXT4 461 aa17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 SLC27A4Q6P1M0 643 aa17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 NRMQ8IXM6 262 aa17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 UBALD2Q8IYN6 164 aa17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 GPBAR1Q8TDU6 330 aa17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 SLC41A3Q96GZ6 507 aa17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 KCNS3Q9BQ31 491 aa17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 POLR2J2Q9GZM3 115 aaKnown RBP17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 KLHL28Q9NXS3 571 aa17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 TESQ9UGI8 421 aaKnown RBP17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 CACNA1IQ9P0X4 2223 aa17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 MYL12BO14950 172 aa17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 PRG2P13727 222 aa17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 MAOBP27338 520 aa17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 VSX2P58304 361 aaPredicted RBP17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 EIF2B5Q13144 721 aaKnown RBP17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 EXOSC7Q15024 291 aaKnown RBP17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 ARHGAP11BQ3KRB8 267 aa17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 FHL5Q5TD97 284 aa17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 RRM2BQ7LG56 351 aa17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 GALNT12Q8IXK2 581 aa17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 CLDN23Q96B33 292 aa17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 KLHDC7BQ96G42 594 aa17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 SDF2Q99470 211 aa17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 SIT1Q9Y3P8 196 aa17.42■□□□□ 0.38
PDLIM4-201ENST00000253754 ZDBF2Q9HCK1 2354 aa17.41■□□□□ 0.38
PDLIM4-201ENST00000253754 PNMA8CA0A1B0GUJ8 204 aa17.41■□□□□ 0.38
PDLIM4-201ENST00000253754 LRRTM2O43300 516 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms