RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 OR2W5A6NFC9 320 aa14.72□□□□□ -0.05
LRFN1-201ENST00000248668 C2CD4DB7Z1M9 353 aa14.72□□□□□ -0.05
LRFN1-201ENST00000248668 SGK494L7N484 410 aa14.72□□□□□ -0.05
LRFN1-201ENST00000248668 CDC123O75794 336 aaPredicted RBP14.72□□□□□ -0.05
LRFN1-201ENST00000248668 HBQ1P09105 142 aa14.72□□□□□ -0.05
LRFN1-201ENST00000248668 PRG2P13727 222 aa14.72□□□□□ -0.05
LRFN1-201ENST00000248668 ALOX12P18054 663 aa14.72□□□□□ -0.05
LRFN1-201ENST00000248668 DRD1P21728 446 aa14.72□□□□□ -0.05
LRFN1-201ENST00000248668 TGM1P22735 817 aa14.72□□□□□ -0.05
LRFN1-201ENST00000248668 SPHARQ15513 63 aa14.72□□□□□ -0.05
LRFN1-201ENST00000248668 OR2G6Q5TZ20 316 aa14.72□□□□□ -0.05
LRFN1-201ENST00000248668 B3GLCTQ6Y288 498 aa14.72□□□□□ -0.05
LRFN1-201ENST00000248668 AMER2Q8N7J2 671 aa14.72□□□□□ -0.05
LRFN1-201ENST00000248668 TEX47Q8TBZ9 253 aa14.72□□□□□ -0.05
LRFN1-201ENST00000248668 RSC1A1Q92681 617 aa14.72□□□□□ -0.05
LRFN1-201ENST00000248668 TRMT61AQ96FX7 289 aaKnown RBP14.72□□□□□ -0.05
LRFN1-201ENST00000248668 HHATLQ9HCP6 504 aa14.72□□□□□ -0.05
LRFN1-201ENST00000248668 DDX28Q9NUL7 540 aaKnown RBP14.72□□□□□ -0.05
LRFN1-201ENST00000248668 SCML1Q9UN30 329 aa14.72□□□□□ -0.05
LRFN1-201ENST00000248668 B4DGG1 531 aa14.71□□□□□ -0.05
LRFN1-201ENST00000248668 AP3D1O14617 1153 aa14.71□□□□□ -0.05
LRFN1-201ENST00000248668 TLX1P31314 330 aaPredicted RBP14.71□□□□□ -0.05
LRFN1-201ENST00000248668 PUS10Q3MIT2 529 aaKnown RBP14.71□□□□□ -0.05
LRFN1-201ENST00000248668 ATCAYQ86WG3 371 aa14.71□□□□□ -0.05
LRFN1-201ENST00000248668 MS4A4EQ96PG1 132 aa14.71□□□□□ -0.05
LRFN1-201ENST00000248668 TRNT1Q96Q11 434 aaKnown RBP14.71□□□□□ -0.05
LRFN1-201ENST00000248668 CITED4Q96RK1 184 aa14.71□□□□□ -0.05
LRFN1-201ENST00000248668 GPR174Q9BXC1 333 aa14.71□□□□□ -0.05
LRFN1-201ENST00000248668 SAP130Q9H0E3 1048 aa14.71□□□□□ -0.05
LRFN1-201ENST00000248668 RPL36Q9Y3U8 105 aaKnown RBP14.71□□□□□ -0.05
LRFN1-201ENST00000248668 MYL12BO14950 172 aa14.71□□□□□ -0.05
LRFN1-201ENST00000248668 CASC3O15234 703 aaKnown RBP14.71□□□□□ -0.05
LRFN1-201ENST00000248668 THY1P04216 161 aa14.71□□□□□ -0.05
LRFN1-201ENST00000248668 ACP2P11117 423 aa14.71□□□□□ -0.05
LRFN1-201ENST00000248668 MAPK14Q16539 360 aa14.71□□□□□ -0.05
LRFN1-201ENST00000248668 CCDC58Q4VC31 144 aa14.71□□□□□ -0.05
LRFN1-201ENST00000248668 C1orf94Q6P1W5 598 aa14.71□□□□□ -0.05
LRFN1-201ENST00000248668 BPHLQ86WA6 291 aaPredicted RBP14.71□□□□□ -0.05
LRFN1-201ENST00000248668 ZFP41Q8N8Y5 198 aa14.71□□□□□ -0.05
LRFN1-201ENST00000248668 FAM83FQ8NEG4 500 aaPredicted RBP14.71□□□□□ -0.05
LRFN1-201ENST00000248668 KBTBD8Q8NFY9 601 aa14.71□□□□□ -0.05
LRFN1-201ENST00000248668 C9orf43Q8TAL5 461 aaPredicted RBP14.71□□□□□ -0.05
LRFN1-201ENST00000248668 TOE1Q96GM8 510 aaKnown RBP14.71□□□□□ -0.05
LRFN1-201ENST00000248668 ZNF486Q96H40 463 aaPredicted RBP14.71□□□□□ -0.05
LRFN1-201ENST00000248668 ZNF582Q96NG8 517 aaPredicted RBP14.71□□□□□ -0.05
LRFN1-201ENST00000248668 CCDC3Q9BQI4 270 aa14.71□□□□□ -0.05
LRFN1-201ENST00000248668 KLHL28Q9NXS3 571 aa14.71□□□□□ -0.05
LRFN1-201ENST00000248668 YARS2Q9Y2Z4 477 aaKnown RBP14.71□□□□□ -0.05
LRFN1-201ENST00000248668 PEX12O00623 359 aa14.71□□□□□ -0.06
LRFN1-201ENST00000248668 CPMP14384 443 aa14.71□□□□□ -0.06
LRFN1-201ENST00000248668 CD40LGP29965 261 aa14.71□□□□□ -0.06
LRFN1-201ENST00000248668 IFNA8P32881 189 aa14.71□□□□□ -0.06
LRFN1-201ENST00000248668 CSTF2P33240 577 aaKnown RBP eCLIP14.71□□□□□ -0.06
LRFN1-201ENST00000248668 NDUFA5Q16718 116 aa14.71□□□□□ -0.06
LRFN1-201ENST00000248668 AKAP14Q86UN6 197 aa14.71□□□□□ -0.06
LRFN1-201ENST00000248668 SLC38A6Q8IZM9 456 aa14.71□□□□□ -0.06
LRFN1-201ENST00000248668 DIO2Q92813 273 aa14.71□□□□□ -0.06
LRFN1-201ENST00000248668 MOAP1Q96BY2 351 aa14.71□□□□□ -0.06
LRFN1-201ENST00000248668 SERINC2Q96SA4 455 aa14.71□□□□□ -0.06
LRFN1-201ENST00000248668 TPSD1Q9BZJ3 242 aa14.71□□□□□ -0.06
LRFN1-201ENST00000248668 FBRSQ9HAH7 460 aa14.71□□□□□ -0.06
LRFN1-201ENST00000248668 CTDSP2O14595 271 aa14.7□□□□□ -0.06
LRFN1-201ENST00000248668 IGFBP4P22692 258 aa14.7□□□□□ -0.06
LRFN1-201ENST00000248668 SOX18P35713 384 aa14.7□□□□□ -0.06
LRFN1-201ENST00000248668 ETV5P41161 510 aa14.7□□□□□ -0.06
LRFN1-201ENST00000248668 ETV1P50549 477 aa14.7□□□□□ -0.06
LRFN1-201ENST00000248668 TEKQ02763 1124 aa14.7□□□□□ -0.06
LRFN1-201ENST00000248668 TRIM69Q86WT6 500 aa14.7□□□□□ -0.06
LRFN1-201ENST00000248668 SLC44A3Q8N4M1 653 aa14.7□□□□□ -0.06
LRFN1-201ENST00000248668 CAMKVQ8NCB2 501 aa14.7□□□□□ -0.06
LRFN1-201ENST00000248668 HOXD1Q9GZZ0 328 aa14.7□□□□□ -0.06
LRFN1-201ENST00000248668 TOR4AQ9NXH8 423 aa14.7□□□□□ -0.06
LRFN1-201ENST00000248668 PCOLCE2Q9UKZ9 415 aa14.7□□□□□ -0.06
LRFN1-201ENST00000248668 SLC7A7Q9UM01 511 aa14.7□□□□□ -0.06
LRFN1-201ENST00000248668 ZNF443Q9Y2A4 671 aaPredicted RBP14.7□□□□□ -0.06
LRFN1-201ENST00000248668 BOLA1Q9Y3E2 137 aa14.7□□□□□ -0.06
LRFN1-201ENST00000248668 RDH16O75452 317 aa14.7□□□□□ -0.06
LRFN1-201ENST00000248668 SLC2A10O95528 541 aa14.7□□□□□ -0.06
LRFN1-201ENST00000248668 TSFMP43897 325 aaKnown RBP14.7□□□□□ -0.06
LRFN1-201ENST00000248668 RACK1P63244 317 aaKnown RBP14.7□□□□□ -0.06
LRFN1-201ENST00000248668 TUBA1BP68363 451 aa14.7□□□□□ -0.06
LRFN1-201ENST00000248668 TRAM2Q15035 370 aa14.7□□□□□ -0.06
LRFN1-201ENST00000248668 TYW3Q6IPR3 259 aaKnown RBP14.7□□□□□ -0.06
LRFN1-201ENST00000248668 CDC73Q6P1J9 531 aa14.7□□□□□ -0.06
LRFN1-201ENST00000248668 ZNF836Q6ZNA1 936 aa14.7□□□□□ -0.06
LRFN1-201ENST00000248668 TUBA1AQ71U36 451 aa14.7□□□□□ -0.06
LRFN1-201ENST00000248668 OR52I1Q8NGK6 324 aa14.7□□□□□ -0.06
LRFN1-201ENST00000248668 NT5CQ8TCD5 201 aa14.7□□□□□ -0.06
LRFN1-201ENST00000248668 FAM60AQ9NP50 221 aa14.7□□□□□ -0.06
LRFN1-201ENST00000248668 COQ3Q9NZJ6 369 aa14.7□□□□□ -0.06
LRFN1-201ENST00000248668 PHF11Q9UIL8 331 aa14.7□□□□□ -0.06
LRFN1-201ENST00000248668 RGS5O15539 181 aa14.7□□□□□ -0.06
LRFN1-201ENST00000248668 TNFP01375 233 aa14.7□□□□□ -0.06
LRFN1-201ENST00000248668 IGHV4-34P06331 123 aa14.7□□□□□ -0.06
LRFN1-201ENST00000248668 CT62P0C5K7 136 aa14.7□□□□□ -0.06
LRFN1-201ENST00000248668 CTSEP14091 401 aa14.7□□□□□ -0.06
LRFN1-201ENST00000248668 S100A5P33763 92 aa14.7□□□□□ -0.06
LRFN1-201ENST00000248668 CD79BP40259 229 aa14.7□□□□□ -0.06
LRFN1-201ENST00000248668 SMSP52788 366 aa14.7□□□□□ -0.06
LRFN1-201ENST00000248668 MRPS21P82921 87 aaKnown RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms