RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 CALCBP10092 127 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 ZNF630Q2M218 657 aaPredicted RBP7.12□□□□□ -1.27
RIF1-201ENST00000243326 ADPRMQ3LIE5 342 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 TRNP1Q6NT89 227 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 C3P1Q6ZMU1 363 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 PLA2G15Q8NCC3 412 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 OR6N1Q8NGY5 312 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 PLIN4Q96Q06 1357 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 RCBTB2O95199 551 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 PAQR6Q6TCH4 344 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 OR2T33Q8NG76 320 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 LMX1AQ8TE12 382 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 PEX11GQ96HA9 241 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 FYTTD1Q96QD9 318 aaKnown RBP7.12□□□□□ -1.27
RIF1-201ENST00000243326 ULBP3Q9BZM4 244 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 LINC00597Q9H2U6 94 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 BRF2Q9HAW0 419 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 MTMR11A4FU01 709 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 LCMT2O60294 686 aaKnown RBP7.12□□□□□ -1.27
RIF1-201ENST00000243326 FRKP42685 505 aaPredicted RBP7.12□□□□□ -1.27
RIF1-201ENST00000243326 GABARAPL2P60520 117 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 C15orf52Q6ZUT6 534 aaKnown RBP7.12□□□□□ -1.27
RIF1-201ENST00000243326 GJD3Q8N144 294 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 OR4K17Q8NGC6 315 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 ZNF597Q96LX8 424 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 SMOC2Q9H3U7 446 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 RPH3ALQ9UNE2 315 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 LATS1O95835 1130 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 OR8U9P0C7N5 309 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 MAOBP27338 520 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 RAB15P59190 212 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 SLC35F2Q8IXU6 374 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 LSMEM2Q8N112 164 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 STEAP2Q8NFT2 490 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 SAP130Q9H0E3 1048 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 TMEM248Q9NWD8 314 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 TCRBV3S1A0A5B6 114 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 TO15178 435 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 ARL6IP5O75915 188 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 CDK1P06493 297 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 C1GALT1C1LP0DN25 315 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 HTR2AP28223 471 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 HCAR3P49019 387 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 C11orf91Q3C1V1 193 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 OTUD1Q5VV17 481 aaPredicted RBP7.12□□□□□ -1.27
RIF1-201ENST00000243326 FKBP1CQ5VVH2 108 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 TMEM102Q8N9M5 508 aaPredicted RBP7.12□□□□□ -1.27
RIF1-201ENST00000243326 SOCS4Q8WXH5 440 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 BRI3BPQ8WY22 251 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 NT5C3BQ969T7 300 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 ZNF775Q96BV0 537 aaPredicted RBP7.12□□□□□ -1.27
RIF1-201ENST00000243326 CCDC32Q9BV29 185 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 DHDHQ9UQ10 334 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 HSD17B1P14061 328 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 POU4F2Q12837 409 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 TMEM115Q12893 351 aaPredicted RBP7.12□□□□□ -1.27
RIF1-201ENST00000243326 TRIM61Q5EBN2 209 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 SLX4IPQ5VYV7 408 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 TPRG1Q6ZUI0 275 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 MDGA1Q8NFP4 955 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 OR2AP1Q8NGE2 309 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 RCE1Q9Y256 329 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 PCNX1Q96RV3 2341 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 HSPB6O14558 160 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 SMAD6O43541 496 aaKnown RBP7.12□□□□□ -1.27
RIF1-201ENST00000243326 SULT1B1O43704 296 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 PRKCAP17252 672 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 CD70P32970 193 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 RGRP47804 291 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 FASLGP48023 281 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 NDUFA9Q16795 377 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 CTU2Q2VPK5 515 aaKnown RBP7.12□□□□□ -1.27
RIF1-201ENST00000243326 COX20Q5RI15 118 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 ZNF527Q8NB42 609 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 KCTD13Q8WZ19 329 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 FAM71F1Q96KD3 344 aaPredicted RBP7.12□□□□□ -1.27
RIF1-201ENST00000243326 ACTR10Q9NZ32 417 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 PUS1Q9Y606 427 aaKnown RBP eCLIP7.12□□□□□ -1.27
RIF1-201ENST00000243326 STYXL1Q9Y6J8 313 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 H7C417 338 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 ACRV1P26436 265 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 CTHP32929 405 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 FAAP20Q6NZ36 180 aa7.12□□□□□ -1.27
RIF1-201ENST00000243326 KDM4FA0A1W2PPD8 638 aa7.11□□□□□ -1.27
RIF1-201ENST00000243326 DHRS4L1P0CG22 281 aa7.11□□□□□ -1.27
RIF1-201ENST00000243326 DPY19L1Q2PZI1 675 aa7.11□□□□□ -1.27
RIF1-201ENST00000243326 PDZD3Q86UT5 571 aa7.11□□□□□ -1.27
RIF1-201ENST00000243326 HPSE2Q8WWQ2 592 aa7.11□□□□□ -1.27
RIF1-201ENST00000243326 FIZ1Q96SL8 496 aa7.11□□□□□ -1.27
RIF1-201ENST00000243326 RHNO1Q9BSD3 238 aa7.11□□□□□ -1.27
RIF1-201ENST00000243326 HYKKA2RU49 373 aa7.11□□□□□ -1.27
RIF1-201ENST00000243326 BDKRB2P30411 391 aa7.11□□□□□ -1.27
RIF1-201ENST00000243326 PITPNBP48739 271 aa7.11□□□□□ -1.27
RIF1-201ENST00000243326 RAB28P51157 221 aa7.11□□□□□ -1.27
RIF1-201ENST00000243326 ART1P52961 327 aa7.11□□□□□ -1.27
RIF1-201ENST00000243326 EXOSC7Q15024 291 aaKnown RBP7.11□□□□□ -1.27
RIF1-201ENST00000243326 ZER1Q7Z7L7 766 aa7.11□□□□□ -1.27
RIF1-201ENST00000243326 ACBD4Q8NC06 268 aa7.11□□□□□ -1.27
RIF1-201ENST00000243326 IGLON5A6NGN9 336 aa7.11□□□□□ -1.27
RIF1-201ENST00000243326 RHOP08100 348 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms