RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 BTBD2Q9BX70 525 aa10.34□□□□□ -0.75
SF3B6-201ENST00000233468 OSBPL11Q9BXB4 747 aa10.34□□□□□ -0.75
SF3B6-201ENST00000233468 TTTY12Q9BZ98 90 aa10.34□□□□□ -0.75
SF3B6-201ENST00000233468 HOXD1Q9GZZ0 328 aa10.34□□□□□ -0.75
SF3B6-201ENST00000233468 PIGUQ9H490 435 aa10.34□□□□□ -0.75
SF3B6-201ENST00000233468 EXD2Q9NVH0 621 aa10.34□□□□□ -0.75
SF3B6-201ENST00000233468 FGFR1OP2Q9NVK5 253 aa10.34□□□□□ -0.75
SF3B6-201ENST00000233468 QPCTLQ9NXS2 382 aa10.34□□□□□ -0.75
SF3B6-201ENST00000233468 NPIPA1Q9UND3 350 aa10.34□□□□□ -0.75
SF3B6-201ENST00000233468 APCP25054 2843 aa10.34□□□□□ -0.75
SF3B6-201ENST00000233468 ABCA12Q86UK0 2595 aa10.33□□□□□ -0.76
SF3B6-201ENST00000233468 CCDC154A6NI56 674 aa10.33□□□□□ -0.76
SF3B6-201ENST00000233468 G3V3Y1 287 aa10.33□□□□□ -0.76
SF3B6-201ENST00000233468 SIAH2O43255 324 aa10.33□□□□□ -0.76
SF3B6-201ENST00000233468 ASNA1O43681 348 aa10.33□□□□□ -0.76
SF3B6-201ENST00000233468 SCN2BO60939 215 aa10.33□□□□□ -0.76
SF3B6-201ENST00000233468 UGT2B11O75310 529 aa10.33□□□□□ -0.76
SF3B6-201ENST00000233468 AVPP01185 164 aa10.33□□□□□ -0.76
SF3B6-201ENST00000233468 ENDOUP21128 410 aaKnown RBP10.33□□□□□ -0.76
SF3B6-201ENST00000233468 MATN1P21941 496 aa10.33□□□□□ -0.76
SF3B6-201ENST00000233468 IL12AP29459 219 aa10.33□□□□□ -0.76
SF3B6-201ENST00000233468 MAP3K8P41279 467 aa10.33□□□□□ -0.76
SF3B6-201ENST00000233468 RFX3P48380 749 aa10.33□□□□□ -0.76
SF3B6-201ENST00000233468 TRPC1P48995 793 aa10.33□□□□□ -0.76
SF3B6-201ENST00000233468 DNASE1L1P49184 302 aa10.33□□□□□ -0.76
SF3B6-201ENST00000233468 DGKQP52824 942 aa10.33□□□□□ -0.76
SF3B6-201ENST00000233468 SLC10A1Q14973 349 aa10.33□□□□□ -0.76
SF3B6-201ENST00000233468 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.33□□□□□ -0.76
SF3B6-201ENST00000233468 ARHGAP11AQ6P4F7 1023 aa10.33□□□□□ -0.76
SF3B6-201ENST00000233468 ANGPTL8Q6UXH0 198 aa10.33□□□□□ -0.76
SF3B6-201ENST00000233468 ZNF621Q6ZSS3 439 aa10.33□□□□□ -0.76
SF3B6-201ENST00000233468 MAMDC2Q7Z304 686 aaPredicted RBP10.33□□□□□ -0.76
SF3B6-201ENST00000233468 EID3Q8N140 333 aa10.33□□□□□ -0.76
SF3B6-201ENST00000233468 SLC16A11Q8NCK7 471 aa10.33□□□□□ -0.76
SF3B6-201ENST00000233468 OR4N2Q8NGD1 307 aa10.33□□□□□ -0.76
SF3B6-201ENST00000233468 RFWD2Q8NHY2 731 aa10.33□□□□□ -0.76
SF3B6-201ENST00000233468 NUDT8Q8WV74 236 aa10.33□□□□□ -0.76
SF3B6-201ENST00000233468 EFHD2Q96C19 240 aaPredicted RBP10.33□□□□□ -0.76
SF3B6-201ENST00000233468 THOC1Q96FV9 657 aaKnown RBP10.33□□□□□ -0.76
SF3B6-201ENST00000233468 RMND5BQ96G75 393 aaPredicted RBP10.33□□□□□ -0.76
SF3B6-201ENST00000233468 SLC35G5Q96KT7 338 aa10.33□□□□□ -0.76
SF3B6-201ENST00000233468 TEX37Q96LM6 180 aa10.33□□□□□ -0.76
SF3B6-201ENST00000233468 SLC35A5Q9BS91 424 aa10.33□□□□□ -0.76
SF3B6-201ENST00000233468 NSRP1Q9H0G5 558 aaKnown RBP10.33□□□□□ -0.76
SF3B6-201ENST00000233468 DEPPQ9NTK1 212 aa10.33□□□□□ -0.76
SF3B6-201ENST00000233468 GPATCH2Q9NW75 528 aa10.33□□□□□ -0.76
SF3B6-201ENST00000233468 TUBA8Q9NY65 449 aaPredicted RBP10.33□□□□□ -0.76
SF3B6-201ENST00000233468 KLHL14Q9P2G3 628 aa10.33□□□□□ -0.76
SF3B6-201ENST00000233468 SCN2AQ99250 2005 aa10.33□□□□□ -0.76
SF3B6-201ENST00000233468 DCHS2Q6V1P9 2916 aa10.32□□□□□ -0.76
SF3B6-201ENST00000233468 HCN1O60741 890 aa10.32□□□□□ -0.76
SF3B6-201ENST00000233468 ICOSLGO75144 302 aa10.32□□□□□ -0.76
SF3B6-201ENST00000233468 TRIM3O75382 744 aaPredicted RBP10.32□□□□□ -0.76
SF3B6-201ENST00000233468 NME6O75414 186 aaPredicted RBP10.32□□□□□ -0.76
SF3B6-201ENST00000233468 GLSO94925 669 aaPredicted RBP10.32□□□□□ -0.76
SF3B6-201ENST00000233468 KCNK2O95069 426 aa10.32□□□□□ -0.76
SF3B6-201ENST00000233468 UNC5CO95185 931 aa10.32□□□□□ -0.76
SF3B6-201ENST00000233468 NGFRP08138 427 aa10.32□□□□□ -0.76
SF3B6-201ENST00000233468 ZCCHC18P0CG32 403 aa10.32□□□□□ -0.76
SF3B6-201ENST00000233468 ACP2P11117 423 aa10.32□□□□□ -0.76
SF3B6-201ENST00000233468 EVI2BP34910 448 aa10.32□□□□□ -0.76
SF3B6-201ENST00000233468 KHKP50053 298 aa10.32□□□□□ -0.76
SF3B6-201ENST00000233468 TDGF1P3P51864 188 aa10.32□□□□□ -0.76
SF3B6-201ENST00000233468 PHC1P78364 1004 aa10.32□□□□□ -0.76
SF3B6-201ENST00000233468 FOXO1Q12778 655 aa10.32□□□□□ -0.76
SF3B6-201ENST00000233468 RCAN2Q14206 197 aa10.32□□□□□ -0.76
SF3B6-201ENST00000233468 DUSP5Q16690 384 aa10.32□□□□□ -0.76
SF3B6-201ENST00000233468 TIGD2Q4W5G0 525 aa10.32□□□□□ -0.76
SF3B6-201ENST00000233468 C6orf10Q5SRN2 563 aa10.32□□□□□ -0.76
SF3B6-201ENST00000233468 MYO7BQ6PIF6 2116 aa10.32□□□□□ -0.76
SF3B6-201ENST00000233468 WDR53Q7Z5U6 358 aaPredicted RBP10.32□□□□□ -0.76
SF3B6-201ENST00000233468 MISPQ8IVT2 679 aa10.32□□□□□ -0.76
SF3B6-201ENST00000233468 SIAH3Q8IW03 269 aa10.32□□□□□ -0.76
SF3B6-201ENST00000233468 ZNF527Q8NB42 609 aa10.32□□□□□ -0.76
SF3B6-201ENST00000233468 OR1J4Q8NGS1 313 aa10.32□□□□□ -0.76
SF3B6-201ENST00000233468 OR5AK3PQ8NH89 298 aa10.32□□□□□ -0.76
SF3B6-201ENST00000233468 MIPOL1Q8TD10 442 aa10.32□□□□□ -0.76
SF3B6-201ENST00000233468 TSPEARQ8WU66 669 aa10.32□□□□□ -0.76
SF3B6-201ENST00000233468 PIK3R3Q92569 461 aa10.32□□□□□ -0.76
SF3B6-201ENST00000233468 SPDL1Q96EA4 605 aa10.32□□□□□ -0.76
SF3B6-201ENST00000233468 NEURL3Q96EH8 262 aa10.32□□□□□ -0.76
SF3B6-201ENST00000233468 C16orf58Q96GQ5 468 aa10.32□□□□□ -0.76
SF3B6-201ENST00000233468 NODALQ96S42 347 aa10.32□□□□□ -0.76
SF3B6-201ENST00000233468 YIPF4Q9BSR8 244 aa10.32□□□□□ -0.76
SF3B6-201ENST00000233468 TMEM120AQ9BXJ8 343 aa10.32□□□□□ -0.76
SF3B6-201ENST00000233468 TBL1XR1Q9BZK7 514 aa10.32□□□□□ -0.76
SF3B6-201ENST00000233468 RAD21L1Q9H4I0 556 aa10.32□□□□□ -0.76
SF3B6-201ENST00000233468 LDAHQ9H6V9 325 aa10.32□□□□□ -0.76
SF3B6-201ENST00000233468 ZDHHC11Q9H8X9 412 aa10.32□□□□□ -0.76
SF3B6-201ENST00000233468 UBQLN4Q9NRR5 601 aa10.32□□□□□ -0.76
SF3B6-201ENST00000233468 THUMPD1Q9NXG2 353 aaKnown RBP10.32□□□□□ -0.76
SF3B6-201ENST00000233468 CCDC167Q9P0B6 97 aa10.32□□□□□ -0.76
SF3B6-201ENST00000233468 A0A1B0GUH1 482 aa10.31□□□□□ -0.76
SF3B6-201ENST00000233468 TMEM247A6NEH6 219 aa10.31□□□□□ -0.76
SF3B6-201ENST00000233468 FAM166BA8MTA8 275 aa10.31□□□□□ -0.76
SF3B6-201ENST00000233468 C9JVG2 144 aa10.31□□□□□ -0.76
SF3B6-201ENST00000233468 H3BNH8 94 aa10.31□□□□□ -0.76
SF3B6-201ENST00000233468 SCDO00767 359 aa10.31□□□□□ -0.76
SF3B6-201ENST00000233468 SUSD5O60279 629 aa10.31□□□□□ -0.76
SF3B6-201ENST00000233468 CDC40O60508 579 aaKnown RBP eCLIP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms