RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 TRGV8A0A0C4DH27 118 aa12.5□□□□□ -0.41
VEGFA-201ENST00000230480 PRSS51A0A1B0GVH4 220 aa12.5□□□□□ -0.41
VEGFA-201ENST00000230480 AQP7O14520 342 aa12.5□□□□□ -0.41
VEGFA-201ENST00000230480 OIP5O43482 229 aa12.5□□□□□ -0.41
VEGFA-201ENST00000230480 CDC40O60508 579 aaKnown RBP eCLIP12.5□□□□□ -0.412e-13■■□□□ 11.5
VEGFA-201ENST00000230480 AGFG2O95081 481 aa12.5□□□□□ -0.41
VEGFA-201ENST00000230480 PTGS2P35354 604 aa12.5□□□□□ -0.41
VEGFA-201ENST00000230480 TMED10P49755 219 aaKnown RBP12.5□□□□□ -0.41
VEGFA-201ENST00000230480 CASP9P55211 416 aa12.5□□□□□ -0.41
VEGFA-201ENST00000230480 FUT5Q11128 374 aa12.5□□□□□ -0.41
VEGFA-201ENST00000230480 SLC10A1Q14973 349 aa12.5□□□□□ -0.41
VEGFA-201ENST00000230480 MAPK11Q15759 364 aa12.5□□□□□ -0.41
VEGFA-201ENST00000230480 GXYLT1Q4G148 440 aa12.5□□□□□ -0.41
VEGFA-201ENST00000230480 AP1ARQ63HQ0 302 aa12.5□□□□□ -0.41
VEGFA-201ENST00000230480 CDC73Q6P1J9 531 aa12.5□□□□□ -0.41
VEGFA-201ENST00000230480 ZCCHC12Q6PEW1 402 aa12.5□□□□□ -0.41
VEGFA-201ENST00000230480 FIGNL1Q6PIW4 674 aa12.5□□□□□ -0.41
VEGFA-201ENST00000230480 PAOXQ6QHF9 649 aa12.5□□□□□ -0.41
VEGFA-201ENST00000230480 ANGPTL8Q6UXH0 198 aa12.5□□□□□ -0.41
VEGFA-201ENST00000230480 SEM1Q6ZVN7 128 aa12.5□□□□□ -0.41
VEGFA-201ENST00000230480 MARCH3Q86UD3 253 aa12.5□□□□□ -0.41
VEGFA-201ENST00000230480 LSRQ86X29 649 aaPredicted RBP12.5□□□□□ -0.41
VEGFA-201ENST00000230480 NATD1Q8N6N6 113 aa12.5□□□□□ -0.41
VEGFA-201ENST00000230480 CEP70Q8NHQ1 597 aa12.5□□□□□ -0.41
VEGFA-201ENST00000230480 RFWD2Q8NHY2 731 aa12.5□□□□□ -0.41
VEGFA-201ENST00000230480 SFXN5Q8TD22 340 aa12.5□□□□□ -0.41
VEGFA-201ENST00000230480 LRRC8CQ8TDW0 803 aa12.5□□□□□ -0.41
VEGFA-201ENST00000230480 CDS1Q92903 461 aa12.5□□□□□ -0.41
VEGFA-201ENST00000230480 RMND5BQ96G75 393 aaPredicted RBP12.5□□□□□ -0.41
VEGFA-201ENST00000230480 CCDC115Q96NT0 180 aa12.5□□□□□ -0.41
VEGFA-201ENST00000230480 MS4A4EQ96PG1 132 aa12.5□□□□□ -0.41
VEGFA-201ENST00000230480 OSBPL11Q9BXB4 747 aa12.5□□□□□ -0.41
VEGFA-201ENST00000230480 PIGUQ9H490 435 aa12.5□□□□□ -0.41
VEGFA-201ENST00000230480 ZNF385DQ9H6B1 395 aa12.5□□□□□ -0.41
VEGFA-201ENST00000230480 QPCTLQ9NXS2 382 aa12.5□□□□□ -0.41
VEGFA-201ENST00000230480 SH3BGRL2Q9UJC5 107 aa12.5□□□□□ -0.41
VEGFA-201ENST00000230480 MEMO1Q9Y316 297 aa12.5□□□□□ -0.41
VEGFA-201ENST00000230480 HCFC1P51610 2035 aa12.5□□□□□ -0.41
VEGFA-201ENST00000230480 CENPVL1A0A0U1RR11 272 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 E9PBE3 544 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 NPIPA2E9PIF3 369 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 NPIPA3F8WFD2 350 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 CCL21O00585 134 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 SUSD5O60279 629 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 EDF1O60869 148 aaKnown RBP12.49□□□□□ -0.41
VEGFA-201ENST00000230480 DIAPH2O60879 1101 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 ABCB7O75027 752 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 UTS2O95399 124 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 KIR3DL1P43629 444 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 TRPC1P48995 793 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 CLDN15P56746 228 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 PLAURQ03405 335 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 CRYZQ08257 329 aaKnown RBP12.49□□□□□ -0.41
VEGFA-201ENST00000230480 EFR3AQ14156 821 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 ELOAQ14241 798 aaKnown RBP12.49□□□□□ -0.41
VEGFA-201ENST00000230480 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.49□□□□□ -0.41
VEGFA-201ENST00000230480 GTDC1Q4AE62 458 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.49□□□□□ -0.411e-7■□□□□ 10.9
VEGFA-201ENST00000230480 SAXO2Q658L1 398 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 C6orf120Q7Z4R8 191 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 OR2M3Q8NG83 312 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 OR5D16Q8NGK9 328 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 NEIL3Q8TAT5 605 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 MIPOL1Q8TD10 442 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 GPR151Q8TDV0 419 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 SLC9A6Q92581 669 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 THOC1Q96FV9 657 aaKnown RBP12.49□□□□□ -0.41
VEGFA-201ENST00000230480 ZNF597Q96LX8 424 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 JSRP1Q96MG2 331 aaPredicted RBP12.49□□□□□ -0.41
VEGFA-201ENST00000230480 OR7D2Q96RA2 312 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 RSPO3Q9BXY4 272 aaPredicted RBP12.49□□□□□ -0.41
VEGFA-201ENST00000230480 OR2B2Q9GZK3 357 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 METTL7AQ9H8H3 244 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 C3orf14Q9HBI5 128 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 Q9N2J8 555 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 DUSP22Q9NRW4 184 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 ATAD3AQ9NVI7 634 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 GIN1Q9NXP7 522 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 BTNL2Q9UIR0 455 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 BOKQ9UMX3 212 aaPredicted RBP12.49□□□□□ -0.41
VEGFA-201ENST00000230480 MAPRE3Q9UPY8 281 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 SLC6A5Q9Y345 797 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 OR10H1Q9Y4A9 318 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 WIF1Q9Y5W5 379 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 SNX8Q9Y5X2 465 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 CRYBG3Q68DQ2 2970 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 CELSR2Q9HCU4 2923 aa12.49□□□□□ -0.41
VEGFA-201ENST00000230480 IGLV3-32A0A0A0MS00 114 aa12.48□□□□□ -0.41
VEGFA-201ENST00000230480 TRGV5A0A0B4J1U4 118 aa12.48□□□□□ -0.41
VEGFA-201ENST00000230480 NPIPA5A0A0B4J1W7 369 aa12.48□□□□□ -0.41
VEGFA-201ENST00000230480 TTC36A6NLP5 189 aa12.48□□□□□ -0.41
VEGFA-201ENST00000230480 NPIPA7E9PJI5 369 aa12.48□□□□□ -0.41
VEGFA-201ENST00000230480 FCMRO60667 390 aa12.48□□□□□ -0.41
VEGFA-201ENST00000230480 HCN1O60741 890 aa12.48□□□□□ -0.41
VEGFA-201ENST00000230480 TGDSO95455 350 aa12.48□□□□□ -0.41
VEGFA-201ENST00000230480 CPSF4O95639 269 aaKnown RBP12.48□□□□□ -0.41
VEGFA-201ENST00000230480 PGRP06401 933 aa12.48□□□□□ -0.41
VEGFA-201ENST00000230480 NPIPA8P0DM63 369 aa12.48□□□□□ -0.41
VEGFA-201ENST00000230480 GP1BBP13224 206 aa12.48□□□□□ -0.41
VEGFA-201ENST00000230480 COL8A1P27658 744 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms