RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 B020004J07RikQ3UTC0 476 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Tmem151aQ6GQT5 468 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 TifaQ793I8 184 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Clba1Q8BHN9 321 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Sidt2Q8CIF6 832 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Vmn1r22Q8R2D1 302 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Abcg4Q91WA9 646 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Imp3Q921Y2 184 aaKnown RBP9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Pcbd2Q9CZL5 136 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Rab3bQ9CZT8 219 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 PhipQ8VDD9 1821 aaKnown RBP9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Wscd2D4PHA7 571 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Gm10037E9PX85 104 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Vmn1r184E9Q2N4 314 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Numa1E9Q7G0 2094 aaKnown RBP9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Galr2O88854 371 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 P01641 117 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Sec1P97353 368 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Cd244Q07763 397 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 B3gnt6Q3USF0 391 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 FcrlbQ5DRQ8 427 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Cbx5Q61686 191 aaKnown RBP9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Olfr1231Q7TQZ8 313 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Olfr503Q7TRU8 323 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Slc35f1Q8BGK5 408 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 GanabQ8BHN3 944 aaKnown RBP9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Tgm4Q8BZH1 670 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Ncr1Q8C567 325 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Casc3Q8K3W3 698 aaKnown RBP9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 TmieQ8K467 153 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Treml1Q8K558 317 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Olfr45Q8VGM1 311 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Vmn1r71Q8VIC0 307 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Cyp4f15Q99N18 534 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Q9D112 206 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Senp8Q9D2Z4 221 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Csnk1dQ9DC28 415 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Gpr155A2AWR3 868 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Nr1h5E9Q5A6 505 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 AlyrefO08583 255 aaKnown RBP9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Ackr2O08707 378 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 NumblO08919 604 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Mcpt2P15119 244 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Pcmt1P23506 227 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Tas2r123P59528 333 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Pde12Q3TIU4 608 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Olfr1101Q7TR59 310 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Pum2Q80U58 1066 aaKnown RBP9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Mfsd8Q8BH31 519 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Prps1l1Q8C5R8 318 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Tceal5Q8CCT4 200 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Cml2Q8CHQ9 238 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Scamp1Q8K021 338 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Mrpl38Q8K2M0 380 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Rbm48Q8K2X2 371 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Tmem268Q8R239 342 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Tmem106aQ8VC04 261 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Adgrl4Q923X1 739 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 MynnQ99MD8 610 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Otub2Q9CQX0 234 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Q9D5Y0 588 aa9.42□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Gm5938A2AEN9 163 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Gm17728E9Q5K2 132 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Rdh5O55240 318 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Pfdn2O70591 154 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Kcnc1P15388 511 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Hoxd8P23463 289 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Pnrc1Q3TWH3 297 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Tstd2Q3U269 495 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 E330014E10RikQ3UL33 481 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 D5Ertd577eQ499F0 481 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Eif1aQ60872 144 aaKnown RBP9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Ttf1Q62187 859 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 ToxQ66JW3 526 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Kctd12Q6WVG3 327 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Zfand1Q8BFR6 268 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 ChdhQ8BJ64 596 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Eif1axQ8BMJ3 144 aaKnown RBP9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Ctdsp2Q8BX07 270 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 D2hgdhQ8CIM3 535 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 TapbplQ8VD31 451 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Olfr689Q8VG18 320 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Olfr617Q8VGA1 318 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Olfr352Q8VGJ9 315 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Abcg5Q99PE8 652 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Tex46Q9CPU3 165 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Gtpbp8Q9CY28 285 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Cpn2Q9DBB9 547 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Acox3Q9EPL9 700 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Il23aQ9EQ14 196 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Nrip3Q9JJR9 240 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Polg2Q9QZM2 459 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Cytl1A1E5L0 139 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Skint10A7TZG1 354 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Zfp738B8JJX8 793 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Scgb2b3D2XZ38 112 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 4930595D18RikD3Z642 64 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Hnrnpa1P49312 320 aaKnown RBP9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Gnb5P62881 395 aa9.41□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Adh7Q64437 374 aa9.41□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 26.1 ms