RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 PTRH1Q86Y79 214 aaKnown RBP16.14■□□□□ 0.17
PHGDH-230ENST00000641927 METTL25Q8N6Q8 603 aa16.14■□□□□ 0.17
PHGDH-230ENST00000641927 G6PC3Q9BUM1 346 aa16.14■□□□□ 0.17
PHGDH-230ENST00000641927 MUC13Q9H3R2 512 aa16.14■□□□□ 0.17
PHGDH-230ENST00000641927 CDCP1Q9H5V8 836 aa16.14■□□□□ 0.17
PHGDH-230ENST00000641927 MKLN1Q9UL63 735 aa16.14■□□□□ 0.17
PHGDH-230ENST00000641927 C1QTNF9BB2RNN3 333 aa16.13■□□□□ 0.17
PHGDH-230ENST00000641927 ITGA10O75578 1167 aa16.13■□□□□ 0.17
PHGDH-230ENST00000641927 IGKV1D-16P01601 117 aa16.13■□□□□ 0.17
PHGDH-230ENST00000641927 C1QTNF9P0C862 333 aa16.13■□□□□ 0.17
PHGDH-230ENST00000641927 ABCD3P28288 659 aa16.13■□□□□ 0.17
PHGDH-230ENST00000641927 IL12BP29460 328 aa16.13■□□□□ 0.17
PHGDH-230ENST00000641927 CHRNEQ04844 493 aa16.13■□□□□ 0.17
PHGDH-230ENST00000641927 TRAP1Q12931 704 aaKnown RBP16.13■□□□□ 0.17
PHGDH-230ENST00000641927 DEFB109BQ30KR1 87 aa16.13■□□□□ 0.17
PHGDH-230ENST00000641927 CRTC2Q53ET0 693 aaPredicted RBP16.13■□□□□ 0.17
PHGDH-230ENST00000641927 LRRC69Q6ZNQ3 347 aa16.13■□□□□ 0.17
PHGDH-230ENST00000641927 LRRC74BQ6ZQY2 392 aa16.13■□□□□ 0.17
PHGDH-230ENST00000641927 HMGN2P46Q86SG4 172 aa16.13■□□□□ 0.17
PHGDH-230ENST00000641927 RPS19BP1Q86WX3 136 aaKnown RBP16.13■□□□□ 0.17
PHGDH-230ENST00000641927 SPPL2CQ8IUH8 684 aa16.13■□□□□ 0.17
PHGDH-230ENST00000641927 SLC34A3Q8N130 599 aa16.13■□□□□ 0.17
PHGDH-230ENST00000641927 BBS10Q8TAM1 723 aa16.13■□□□□ 0.17
PHGDH-230ENST00000641927 SLC22A8Q8TCC7 542 aa16.13■□□□□ 0.17
PHGDH-230ENST00000641927 OMA1Q96E52 524 aa16.13■□□□□ 0.17
PHGDH-230ENST00000641927 NSMCE2Q96MF7 247 aa16.13■□□□□ 0.17
PHGDH-230ENST00000641927 ZNF350Q9GZX5 532 aa16.13■□□□□ 0.17
PHGDH-230ENST00000641927 ACTR3BQ9P1U1 418 aa16.13■□□□□ 0.17
PHGDH-230ENST00000641927 RAXQ9Y2V3 346 aa16.13■□□□□ 0.17
PHGDH-230ENST00000641927 ZNF451Q9Y4E5 1061 aa16.13■□□□□ 0.17
PHGDH-230ENST00000641927 A0A0G2JPF8 293 aa16.12■□□□□ 0.17
PHGDH-230ENST00000641927 A6NL46 340 aa16.12■□□□□ 0.17
PHGDH-230ENST00000641927 HNRNPCL2B2RXH8 293 aa16.12■□□□□ 0.17
PHGDH-230ENST00000641927 HNRNPCL3B7ZW38 293 aa16.12■□□□□ 0.17
PHGDH-230ENST00000641927 ACOT8O14734 319 aa16.12■□□□□ 0.17
PHGDH-230ENST00000641927 TO15178 435 aa16.12■□□□□ 0.17
PHGDH-230ENST00000641927 HNRNPCL4P0DMR1 293 aa16.12■□□□□ 0.17
PHGDH-230ENST00000641927 KDELR2P33947 212 aa16.12■□□□□ 0.17
PHGDH-230ENST00000641927 ST13P50502 369 aaKnown RBP16.12■□□□□ 0.17
PHGDH-230ENST00000641927 PSMD4P55036 377 aaKnown RBP16.12■□□□□ 0.17
PHGDH-230ENST00000641927 POLE2P56282 527 aa16.12■□□□□ 0.17
PHGDH-230ENST00000641927 PSPHP78330 225 aa16.12■□□□□ 0.17
PHGDH-230ENST00000641927 FXNQ16595 210 aa16.12■□□□□ 0.17
PHGDH-230ENST00000641927 FLYWCH1Q4VC44 716 aa16.12■□□□□ 0.17
PHGDH-230ENST00000641927 BROXQ5VW32 411 aa16.12■□□□□ 0.17
PHGDH-230ENST00000641927 JMJD6Q6NYC1 403 aaPredicted RBP16.12■□□□□ 0.17
PHGDH-230ENST00000641927 KRT73Q86Y46 540 aa16.12■□□□□ 0.17
PHGDH-230ENST00000641927 FAM13CQ8NE31 585 aa16.12■□□□□ 0.17
PHGDH-230ENST00000641927 BHLHE22Q8NFJ8 381 aaPredicted RBP16.12■□□□□ 0.17
PHGDH-230ENST00000641927 SLC26A7Q8TE54 656 aa16.12■□□□□ 0.17
PHGDH-230ENST00000641927 RASL10BQ96S79 203 aa16.12■□□□□ 0.17
PHGDH-230ENST00000641927 ZNF607Q96SK3 696 aa16.12■□□□□ 0.17
PHGDH-230ENST00000641927 ADOQ96SZ5 270 aa16.12■□□□□ 0.17
PHGDH-230ENST00000641927 TRIM15Q9C019 465 aa16.12■□□□□ 0.17
PHGDH-230ENST00000641927 LHPPQ9H008 270 aa16.12■□□□□ 0.17
PHGDH-230ENST00000641927 QRSL1Q9H0R6 528 aaKnown RBP16.12■□□□□ 0.17
PHGDH-230ENST00000641927 ING2Q9H160 280 aa16.12■□□□□ 0.17
PHGDH-230ENST00000641927 SLC38A1Q9H2H9 487 aa16.12■□□□□ 0.17
PHGDH-230ENST00000641927 ZBTB20Q9HC78 741 aaPredicted RBP16.12■□□□□ 0.17
PHGDH-230ENST00000641927 NPFFR2Q9Y5X5 522 aa16.12■□□□□ 0.17
PHGDH-230ENST00000641927 M0QX08 132 aa16.11■□□□□ 0.17
PHGDH-230ENST00000641927 MAN1A2O60476 641 aa16.11■□□□□ 0.17
PHGDH-230ENST00000641927 ZNF354AO60765 605 aaPredicted RBP16.11■□□□□ 0.17
PHGDH-230ENST00000641927 PDE9AO76083 593 aa16.11■□□□□ 0.17
PHGDH-230ENST00000641927 ATP6V1B2P21281 511 aa16.11■□□□□ 0.17
PHGDH-230ENST00000641927 RAPSNQ13702 412 aa16.11■□□□□ 0.17
PHGDH-230ENST00000641927 PRAMEF8Q5VWM4 474 aa16.11■□□□□ 0.17
PHGDH-230ENST00000641927 PRAMEF7Q5VXH5 474 aa16.11■□□□□ 0.17
PHGDH-230ENST00000641927 B3GNTL1Q67FW5 361 aaPredicted RBP16.11■□□□□ 0.17
PHGDH-230ENST00000641927 TYW3Q6IPR3 259 aaKnown RBP16.11■□□□□ 0.17
PHGDH-230ENST00000641927 UNQ6494/PRO21346Q6UXR6 183 aa16.11■□□□□ 0.17
PHGDH-230ENST00000641927 FRRS1Q6ZNA5 592 aa16.11■□□□□ 0.17
PHGDH-230ENST00000641927 ZAR1Q86SH2 424 aa16.11■□□□□ 0.17
PHGDH-230ENST00000641927 PATL1Q86TB9 770 aaKnown RBP16.11■□□□□ 0.17
PHGDH-230ENST00000641927 OR5M3Q8NGP4 307 aa16.11■□□□□ 0.17
PHGDH-230ENST00000641927 FAM110BQ8TC76 370 aa16.11■□□□□ 0.17
PHGDH-230ENST00000641927 WDR60Q8WVS4 1066 aa16.11■□□□□ 0.17
PHGDH-230ENST00000641927 DIO2Q92813 273 aa16.11■□□□□ 0.17
PHGDH-230ENST00000641927 COL21A1Q96P44 957 aa16.11■□□□□ 0.17
PHGDH-230ENST00000641927 CACYBPQ9HB71 228 aaKnown RBP16.11■□□□□ 0.17
PHGDH-230ENST00000641927 BCL2L10Q9HD36 194 aa16.11■□□□□ 0.17
PHGDH-230ENST00000641927 TEKT2Q9UIF3 430 aa16.11■□□□□ 0.17
PHGDH-230ENST00000641927 YARS2Q9Y2Z4 477 aaKnown RBP16.11■□□□□ 0.17
PHGDH-230ENST00000641927 RRP15Q9Y3B9 282 aaKnown RBP16.11■□□□□ 0.17
PHGDH-230ENST00000641927 V9GYQ6 96 aa16.11■□□□□ 0.17
PHGDH-230ENST00000641927 NPIPA5A0A0B4J1W7 369 aa16.11■□□□□ 0.17
PHGDH-230ENST00000641927 NPIPA7E9PJI5 369 aa16.11■□□□□ 0.17
PHGDH-230ENST00000641927 HS6ST1O60243 411 aa16.11■□□□□ 0.17
PHGDH-230ENST00000641927 GCM2O75603 506 aaPredicted RBP16.11■□□□□ 0.17
PHGDH-230ENST00000641927 SERPINB7O75635 380 aa16.11■□□□□ 0.17
PHGDH-230ENST00000641927 ZIC2O95409 532 aaPredicted RBP16.11■□□□□ 0.17
PHGDH-230ENST00000641927 IL33O95760 270 aa16.11■□□□□ 0.17
PHGDH-230ENST00000641927 ZNF682O95780 498 aa16.11■□□□□ 0.17
PHGDH-230ENST00000641927 SERPINA1P01009 418 aa16.11■□□□□ 0.17
PHGDH-230ENST00000641927 OPN1SWP03999 348 aa16.11■□□□□ 0.17
PHGDH-230ENST00000641927 ALPPP05187 535 aa16.11■□□□□ 0.17
PHGDH-230ENST00000641927 NPIPA8P0DM63 369 aa16.11■□□□□ 0.17
PHGDH-230ENST00000641927 PCBP3P57721 371 aaKnown RBP16.11■□□□□ 0.17
PHGDH-230ENST00000641927 MLF1P58340 268 aa16.11■□□□□ 0.17
PHGDH-230ENST00000641927 KPNB1Q14974 876 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms