RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 OVCH1Q7RTY7 1134 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 TSEN54Q7Z6J9 526 aaKnown RBP12.17□□□□□ -0.46
PHGDH-221ENST00000641573 LAPTM4BQ86VI4 370 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 PACRGLQ8N7B6 248 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 COX18Q8N8Q8 333 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 PLPP5Q8NEB5 264 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 OR7G1Q8NGA0 311 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 GPR32P1Q8NGA4 272 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 OR2T29Q8NH02 315 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 GPR151Q8TDV0 419 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 PTPMT1Q8WUK0 201 aaPredicted RBP12.17□□□□□ -0.46
PHGDH-221ENST00000641573 KCNE4Q8WWG9 221 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 PIK3R3Q92569 461 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 CMKLR1Q99788 373 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 RSPO3Q9BXY4 272 aaPredicted RBP12.17□□□□□ -0.46
PHGDH-221ENST00000641573 FAM117AQ9C073 453 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 STRADBQ9C0K7 418 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 OR10A5Q9H207 317 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 SLC38A1Q9H2H9 487 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 C14orf105Q9NVL8 296 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 SLC39A1Q9NY26 324 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 IFT80Q9P2H3 777 aaPredicted RBP12.17□□□□□ -0.46
PHGDH-221ENST00000641573 PADI2Q9Y2J8 665 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 SH3GLB1Q9Y371 365 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 DSPPQ9NZW4 1301 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 UBR5O95071 2799 aaPredicted RBP12.16□□□□□ -0.46
PHGDH-221ENST00000641573 GXYLT2A0PJZ3 443 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 PRAMEF25A6NGN4 478 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 H0YJX3 145 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 MEN1O00255 615 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 KLK10O43240 276 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 DYRK3O43781 588 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 FCMRO60667 390 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 E2F6O75461 281 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 SOX30O94993 753 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 RASAL1O95294 804 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 AK1P00568 194 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 CLPSP04118 112 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 ALPPP05187 535 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 ACADSP16219 412 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 ZNF28P17035 718 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 ATP6V1C1P21283 382 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 AGXTP21549 392 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 OR1E2P47887 323 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 IST1P53990 364 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 POU6F2P78424 691 aaPredicted RBP12.16□□□□□ -0.46
PHGDH-221ENST00000641573 ZNHIT3Q15649 155 aaPredicted RBP12.16□□□□□ -0.46
PHGDH-221ENST00000641573 ELAVL1Q15717 326 aaKnown RBP12.16□□□□□ -0.46
PHGDH-221ENST00000641573 NRF1Q16656 503 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 CMPK2Q5EBM0 449 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 DCST2Q5T1A1 773 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 CCNJQ5T5M9 372 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 CDCP2Q5VXM1 449 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 FRRS1Q6ZNA5 592 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 SHISA6Q6ZSJ9 500 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 HMGN2P46Q86SG4 172 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 SVOPLQ8N434 492 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 ZNF615Q8N8J6 731 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 CHDHQ8NE62 594 aaPredicted RBP12.16□□□□□ -0.46
PHGDH-221ENST00000641573 OR5K1Q8NHB7 308 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 PROX1Q92786 737 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 SENP5Q96HI0 755 aaPredicted RBP12.16□□□□□ -0.46
PHGDH-221ENST00000641573 VSTM2LQ96N03 204 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 SDF2Q99470 211 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 C8orf4Q9NR00 106 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 THSD1Q9NS62 852 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 VNN3Q9NY84 501 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 NDUFAF4Q9P032 175 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 PRODH2Q9UF12 536 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 IL17BQ9UHF5 180 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 SATB2Q9UPW6 733 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 LOXL2Q9Y4K0 774 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 PCDHGA8Q9Y5G5 932 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 CLCA3PQ9Y6N3 262 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 NUP210LQ5VU65 1888 aa12.16□□□□□ -0.46
PHGDH-221ENST00000641573 COL27A1Q8IZC6 1860 aaPredicted RBP12.16□□□□□ -0.46
PHGDH-221ENST00000641573 C7orf72A4D263 438 aa12.15□□□□□ -0.46
PHGDH-221ENST00000641573 SYNDIG1LA6NDD5 238 aa12.15□□□□□ -0.46
PHGDH-221ENST00000641573 VSTM2BA6NLU5 285 aa12.15□□□□□ -0.46
PHGDH-221ENST00000641573 G3V2T6 193 aa12.15□□□□□ -0.46
PHGDH-221ENST00000641573 EI24O14681 340 aa12.15□□□□□ -0.46
PHGDH-221ENST00000641573 DPM1O60762 260 aa12.15□□□□□ -0.46
PHGDH-221ENST00000641573 DDAH2O95865 285 aa12.15□□□□□ -0.46
PHGDH-221ENST00000641573 IFNW1P05000 195 aa12.15□□□□□ -0.46
PHGDH-221ENST00000641573 HEXBP07686 556 aa12.15□□□□□ -0.46
PHGDH-221ENST00000641573 ITGA2P17301 1181 aa12.15□□□□□ -0.46
PHGDH-221ENST00000641573 DCTP40126 519 aa12.15□□□□□ -0.46
PHGDH-221ENST00000641573 FOXL2P58012 376 aa12.15□□□□□ -0.46
PHGDH-221ENST00000641573 PPP1R8Q12972 351 aaKnown RBP12.15□□□□□ -0.46
PHGDH-221ENST00000641573 TYW3Q6IPR3 259 aaKnown RBP12.15□□□□□ -0.46
PHGDH-221ENST00000641573 LCN10Q6JVE6 187 aa12.15□□□□□ -0.46
PHGDH-221ENST00000641573 TBPL2Q6SJ96 375 aa12.15□□□□□ -0.46
PHGDH-221ENST00000641573 TMEM179BQ7Z7N9 219 aa12.15□□□□□ -0.46
PHGDH-221ENST00000641573 STK32CQ86UX6 486 aa12.15□□□□□ -0.46
PHGDH-221ENST00000641573 ZDHHC13Q8IUH4 622 aa12.15□□□□□ -0.46
PHGDH-221ENST00000641573 OR14A16Q8NHC5 309 aa12.15□□□□□ -0.46
PHGDH-221ENST00000641573 C16orf52Q8NHV5 167 aa12.15□□□□□ -0.46
PHGDH-221ENST00000641573 SLC2A12Q8TD20 617 aa12.15□□□□□ -0.46
PHGDH-221ENST00000641573 APOBEC4Q8WW27 367 aaKnown RBP12.15□□□□□ -0.46
PHGDH-221ENST00000641573 TTC9Q92623 222 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms