RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 WDR45Q9Y484 360 aa11.98□□□□□ -0.49
PHGDH-218ENST00000641491 AHCTF1Q8WYP5 2266 aa11.98□□□□□ -0.49
PHGDH-218ENST00000641491 SEC16AO15027 2179 aa11.98□□□□□ -0.49
PHGDH-218ENST00000641491 TRBV5-3A0A0A0MS03 114 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 FXYD1O00168 92 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 HMGN4O00479 90 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 CDK2AP1O14519 115 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 C1QL1O75973 258 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 T-ENOLP0DO92 83 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 GPX2P18283 190 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 WT1P19544 449 aaPredicted RBP11.97□□□□□ -0.49
PHGDH-218ENST00000641491 ME2P23368 584 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 ITPKBP27987 946 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 ABCD3P28288 659 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 PTPN6P29350 595 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 LCN1P31025 176 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 PIGAP37287 484 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 CYB561P49447 251 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 MLF1P58340 268 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 DUSP8Q13202 625 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 SELPLGQ14242 412 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 ARHGAP11BQ3KRB8 267 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 PIGGQ5H8A4 983 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 PATL1Q86TB9 770 aaKnown RBP11.97□□□□□ -0.49
PHGDH-218ENST00000641491 APLFQ8IW19 511 aaPredicted RBP11.97□□□□□ -0.49
PHGDH-218ENST00000641491 MSRB3Q8IXL7 192 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 MICU2Q8IYU8 434 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 CYP4Z2PQ8N1L4 340 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 BCORP1Q8N888 145 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 LSM14AQ8ND56 463 aaKnown RBP11.97□□□□□ -0.49
PHGDH-218ENST00000641491 OR5M3Q8NGP4 307 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 RASSF5Q8WWW0 418 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 ADIPOR1Q96A54 375 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 EFHD2Q96C19 240 aaPredicted RBP11.97□□□□□ -0.49
PHGDH-218ENST00000641491 CCDC124Q96CT7 223 aaKnown RBP11.97□□□□□ -0.49
PHGDH-218ENST00000641491 TMEM19Q96HH6 336 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 C5orf34Q96MH7 638 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 RASL10BQ96S79 203 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 GPATCH1Q9BRR8 931 aaKnown RBP11.97□□□□□ -0.49
PHGDH-218ENST00000641491 TBL1XR1Q9BZK7 514 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 TRIM8Q9BZR9 551 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 MUC13Q9H3R2 512 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 TMEM38AQ9H6F2 299 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 ZBTB20Q9HC78 741 aaPredicted RBP11.97□□□□□ -0.49
PHGDH-218ENST00000641491 TIMMDC1Q9NPL8 285 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 TAS2R1Q9NYW7 299 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 KLRF1Q9NZS2 232 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 TMEM181Q9P2C4 612 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 MAGEL2Q9UJ55 1249 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 ZNF232Q9UNY5 417 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 DTX4Q9Y2E6 619 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 NPFFR2Q9Y5X5 522 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 KCNMB2Q9Y691 235 aa11.97□□□□□ -0.49
PHGDH-218ENST00000641491 FER1L5A0AVI2 2057 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 A0A0G2JPF8 293 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 GXYLT2A0PJZ3 443 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 PRORSD1PA6NEY8 169 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 CYSRT1A8MQ03 144 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 HNRNPCL2B2RXH8 293 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 HNRNPCL3B7ZW38 293 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 TO15178 435 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 PPM1BO75688 479 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 KCNK2O95069 426 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 H6PDO95479 791 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 CLPSP04118 112 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 P04436 131 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 ITGB2P05107 769 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 HNRNPCL4P0DMR1 293 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 ARAFP10398 606 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 PLA2G2AP14555 144 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 NAGAP17050 411 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 ENDOUP21128 410 aaKnown RBP11.96□□□□□ -0.49
PHGDH-218ENST00000641491 PCGF2P35227 344 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 GSK3BP49841 420 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 PSG6Q00889 435 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 LARS2Q15031 903 aaKnown RBP11.96□□□□□ -0.49
PHGDH-218ENST00000641491 GPR68Q15743 365 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 VMACQ2NL98 169 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 LRRC23Q53EV4 343 aaPredicted RBP11.96□□□□□ -0.49
PHGDH-218ENST00000641491 PRAMEF8Q5VWM4 474 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 PRAMEF7Q5VXH5 474 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 IL20RBQ6UXL0 311 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 NPSR1Q6W5P4 371 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 LRRC74BQ6ZQY2 392 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 SLC15A3Q8IY34 581 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 BEST3Q8N1M1 668 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 ZADH2Q8N4Q0 377 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 RNF148Q8N7C7 305 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 SIMC1Q8NDZ2 872 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 BHLHE22Q8NFJ8 381 aaPredicted RBP11.96□□□□□ -0.49
PHGDH-218ENST00000641491 LZICQ8WZA0 190 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 DIO2Q92813 273 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 MAL2Q969L2 176 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 SPACA9Q96E40 222 aaPredicted RBP11.96□□□□□ -0.49
PHGDH-218ENST00000641491 SLC35A4Q96G79 324 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 ADOQ96SZ5 270 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 ADPRHL2Q9NX46 363 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 CMTM6Q9NX76 183 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 KLHL28Q9NXS3 571 aa11.96□□□□□ -0.49
PHGDH-218ENST00000641491 ABCD2Q9UBJ2 740 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms