RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 F12P00748 615 aaPredicted RBP11.17□□□□□ -0.62
RBFOX1-224ENST00000641259 PREPP48147 710 aa11.17□□□□□ -0.62
RBFOX1-224ENST00000641259 ALDH9A1P49189 494 aa11.17□□□□□ -0.62
RBFOX1-224ENST00000641259 RAET1GQ6H3X3 334 aa11.17□□□□□ -0.62
RBFOX1-224ENST00000641259 UNC5DQ6UXZ4 953 aa11.17□□□□□ -0.62
RBFOX1-224ENST00000641259 ATOH1Q92858 354 aaPredicted RBP11.17□□□□□ -0.62
RBFOX1-224ENST00000641259 MED8Q96G25 268 aa11.17□□□□□ -0.62
RBFOX1-224ENST00000641259 PDLIM5Q96HC4 596 aaKnown RBP11.17□□□□□ -0.62
RBFOX1-224ENST00000641259 MNTQ99583 582 aa11.17□□□□□ -0.62
RBFOX1-224ENST00000641259 TMEM121BQ9BXQ6 578 aaPredicted RBP11.17□□□□□ -0.62
RBFOX1-224ENST00000641259 PHF11Q9UIL8 331 aa11.17□□□□□ -0.62
RBFOX1-224ENST00000641259 FBXL3Q9UKT7 428 aa11.17□□□□□ -0.62
RBFOX1-224ENST00000641259 SPTBP11277 2137 aa11.17□□□□□ -0.62
RBFOX1-224ENST00000641259 RGS4P49798 205 aa11.17□□□□□ -0.62
RBFOX1-224ENST00000641259 CLCNKAP51800 687 aa11.17□□□□□ -0.62
RBFOX1-224ENST00000641259 PDSS1Q5T2R2 415 aa11.17□□□□□ -0.62
RBFOX1-224ENST00000641259 ZNF425Q6IV72 752 aa11.17□□□□□ -0.62
RBFOX1-224ENST00000641259 FAAP20Q6NZ36 180 aa11.17□□□□□ -0.62
RBFOX1-224ENST00000641259 OR4A15Q8NGL6 344 aa11.17□□□□□ -0.62
RBFOX1-224ENST00000641259 OR2A12Q8NGT7 310 aa11.17□□□□□ -0.62
RBFOX1-224ENST00000641259 WDR20Q8TBZ3 569 aa11.17□□□□□ -0.62
RBFOX1-224ENST00000641259 EXOSC8Q96B26 276 aaKnown RBP11.17□□□□□ -0.62
RBFOX1-224ENST00000641259 ZNF578Q96N58 590 aaPredicted RBP11.17□□□□□ -0.62
RBFOX1-224ENST00000641259 CCDC115Q96NT0 180 aa11.17□□□□□ -0.62
RBFOX1-224ENST00000641259 NKX2-4Q9H2Z4 354 aa11.17□□□□□ -0.62
RBFOX1-224ENST00000641259 ACTL8Q9H568 366 aa11.17□□□□□ -0.62
RBFOX1-224ENST00000641259 MED11Q9P086 117 aa11.17□□□□□ -0.62
RBFOX1-224ENST00000641259 RPH3AQ9Y2J0 694 aaPredicted RBP11.17□□□□□ -0.62
RBFOX1-224ENST00000641259 CACNG2Q9Y698 323 aa11.17□□□□□ -0.62
RBFOX1-224ENST00000641259 PLXNB3Q9ULL4 1909 aa11.17□□□□□ -0.62
RBFOX1-224ENST00000641259 ALPK2Q86TB3 2170 aa11.17□□□□□ -0.62
RBFOX1-224ENST00000641259 H7C0S8 307 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 FFAR2O15552 330 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 SDC3O75056 442 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 FGF19O95750 216 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 IGSF6O95976 241 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 ANKRD34CP0C6C1 535 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 ETFAP13804 333 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 BPIP17213 487 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 CLDN20P56880 219 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 BLOC1S1P78537 153 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 BOP1Q14137 746 aaKnown RBP11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 FAM78AQ5JUQ0 283 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 TNFAIP8L2Q6P589 184 aaPredicted RBP11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 ZDHHC1Q8WTX9 485 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 SPSB2Q99619 263 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 KATNB1Q9BVA0 655 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 ZNF471Q9BX82 626 aaPredicted RBP11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 TMEM168Q9H0V1 697 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 TMEM185BQ9H7F4 350 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 IL26Q9NPH9 171 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 TAS2R7Q9NYW3 318 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 GPR160Q9UJ42 338 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 A0A0B4J203 849 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 GPR31O00270 319 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 AGPAT2O15120 278 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 LINC01565O15544 149 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 LANCL1O43813 399 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 CTSLP07711 333 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 CBSLP0DN79 551 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 GABRB1P18505 474 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 ZP3P21754 424 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 ACSL1P33121 698 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 CBSP35520 551 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 NFKB2Q00653 900 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 RBM39Q14498 530 aaKnown RBP11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 PUM1Q14671 1186 aaKnown RBP eCLIP11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 DHCR24Q15392 516 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 TIGD3Q6B0B8 471 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 SMARCD3Q6STE5 483 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 FIP1L1Q6UN15 594 aaKnown RBP11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 NPAS3Q8IXF0 933 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 MSRB3Q8IXL7 192 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 ADGRF3Q8IZF5 1079 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 C11orf65Q8NCR3 313 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 ECHDC3Q96DC8 303 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 OR4K3Q96R72 315 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 SLC38A3Q99624 504 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 NKX6-2Q9C056 277 aaPredicted RBP11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 MTIF3Q9H2K0 278 aaKnown RBP11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 CHRDQ9H2X0 955 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 ZFYVE1Q9HBF4 777 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 SEMA3GQ9NS98 782 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 IMP3Q9NV31 184 aaKnown RBP11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 RPL36Q9Y3U8 105 aaKnown RBP11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 SLC22A7Q9Y694 548 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 PRSS21Q9Y6M0 314 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 ARPC1BO15143 372 aaKnown RBP11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 TSPAN12O95859 305 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 TCRBP04435 133 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 CSNK1DP48730 415 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 VEGFCP49767 419 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 RPS26P62854 115 aaKnown RBP11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 POM121L1PQ3SYA9 428 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 CCDC157Q569K6 752 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 METTL11BQ5VVY1 283 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 GPR26Q8NDV2 337 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 LKAAEAR1Q8TD35 194 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 CIPCQ9C0C6 399 aa11.16□□□□□ -0.62
RBFOX1-224ENST00000641259 ASF1BQ9NVP2 202 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms