RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 ZNF619Q8N2I2 560 aa16.56■□□□□ 0.24
SCARB2-223ENST00000640640 OR51L1Q8NGJ5 315 aa16.56■□□□□ 0.24
SCARB2-223ENST00000640640 ADAMTS16Q8TE57 1224 aa16.56■□□□□ 0.24
SCARB2-223ENST00000640640 ENPP5Q9UJA9 477 aa16.56■□□□□ 0.24
SCARB2-223ENST00000640640 NUMBLQ9Y6R0 609 aa16.56■□□□□ 0.24
SCARB2-223ENST00000640640 NPIPA5A0A0B4J1W7 369 aa16.56■□□□□ 0.24
SCARB2-223ENST00000640640 TARM1B6A8C7 271 aa16.56■□□□□ 0.24
SCARB2-223ENST00000640640 NPIPA7E9PJI5 369 aa16.56■□□□□ 0.24
SCARB2-223ENST00000640640 INMT-MINDY4F8WBC2 141 aa16.56■□□□□ 0.24
SCARB2-223ENST00000640640 NPIPA8P0DM63 369 aa16.56■□□□□ 0.24
SCARB2-223ENST00000640640 CTGFP29279 349 aa16.56■□□□□ 0.24
SCARB2-223ENST00000640640 ACTA2P62736 377 aa16.56■□□□□ 0.24
SCARB2-223ENST00000640640 ACTG2P63267 376 aa16.56■□□□□ 0.24
SCARB2-223ENST00000640640 BCL7AQ4VC05 210 aa16.56■□□□□ 0.24
SCARB2-223ENST00000640640 KLHL26Q53HC5 615 aa16.56■□□□□ 0.24
SCARB2-223ENST00000640640 MEX3DQ86XN8 651 aaKnown RBP16.56■□□□□ 0.24
SCARB2-223ENST00000640640 TMEM151AQ8N4L1 468 aa16.56■□□□□ 0.24
SCARB2-223ENST00000640640 TOR1AIP2Q8NFQ8 470 aa16.56■□□□□ 0.24
SCARB2-223ENST00000640640 TMEM239Q8WW34 195 aa16.56■□□□□ 0.24
SCARB2-223ENST00000640640 NXPE3Q969Y0 559 aa16.56■□□□□ 0.24
SCARB2-223ENST00000640640 CHFRQ96EP1 664 aa16.56■□□□□ 0.24
SCARB2-223ENST00000640640 CNN2Q99439 309 aaKnown RBP16.56■□□□□ 0.24
SCARB2-223ENST00000640640 MS4A8Q9BY19 250 aa16.56■□□□□ 0.24
SCARB2-223ENST00000640640 HOXD1Q9GZZ0 328 aa16.56■□□□□ 0.24
SCARB2-223ENST00000640640 TNFRSF12AQ9NP84 129 aa16.56■□□□□ 0.24
SCARB2-223ENST00000640640 CCDC59Q9P031 241 aaKnown RBP16.56■□□□□ 0.24
SCARB2-223ENST00000640640 A0A1B0GVI7 797 aa16.56■□□□□ 0.24
SCARB2-223ENST00000640640 LRRN3E7EW58 273 aa16.56■□□□□ 0.24
SCARB2-223ENST00000640640 NDUFB2O95178 105 aa16.56■□□□□ 0.24
SCARB2-223ENST00000640640 PLGP00747 810 aaPredicted RBP16.56■□□□□ 0.24
SCARB2-223ENST00000640640 GKN3PP0CG01 181 aa16.56■□□□□ 0.24
SCARB2-223ENST00000640640 ALG1LQ6GMV1 187 aa16.56■□□□□ 0.24
SCARB2-223ENST00000640640 SYCE2Q6PIF2 218 aa16.56■□□□□ 0.24
SCARB2-223ENST00000640640 MCATQ8IVS2 390 aaKnown RBP16.56■□□□□ 0.24
SCARB2-223ENST00000640640 DNAJA4Q8WW22 397 aaPredicted RBP16.56■□□□□ 0.24
SCARB2-223ENST00000640640 LRRN3Q9H3W5 708 aa16.56■□□□□ 0.24
SCARB2-223ENST00000640640 TEX10Q9NXF1 929 aaPredicted RBP16.56■□□□□ 0.24
SCARB2-223ENST00000640640 RFXAPO00287 272 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 PEX11BO96011 259 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 GPX2P18283 190 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 HOXC12P31275 282 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 MAB21L1Q13394 359 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 CCNJQ5T5M9 372 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 CCBE1Q6UXH8 406 aaPredicted RBP16.55■□□□□ 0.24
SCARB2-223ENST00000640640 BHLHA9Q7RTU4 235 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 CCDC107Q8WV48 283 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 RFT1Q96AA3 541 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 ASB16Q96NS5 453 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 OR7D2Q96RA2 312 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 KCMF1Q9P0J7 381 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 J3KTA2 159 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 AIFM1O95831 613 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 GRPRP30550 384 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 PODNL1Q6PEZ8 512 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 GDPGP1Q6ZNW5 385 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 VN1R2Q8NFZ6 395 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 SLC38A5Q8WUX1 472 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 NUDT8Q8WV74 236 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 C1QTNF3Q9BXJ4 246 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 TMEM168Q9H0V1 697 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 RXFP3Q9NSD7 469 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 PPP4R1LQ9P1A2 415 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 MICAL3Q7RTP6 2002 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 CDC40O60508 579 aaKnown RBP eCLIP16.55■□□□□ 0.24
SCARB2-223ENST00000640640 JMJD7P0C870 316 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 OPRL1P41146 370 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 DEFB133Q30KQ1 61 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 NHSL2Q5HYW2 709 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 TMEM31Q5JXX7 168 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 TMEM240Q5SV17 173 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 SFXN5Q8TD22 340 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 HAVCR1Q96D42 359 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 CHMP1AQ9HD42 196 aaPredicted RBP16.55■□□□□ 0.24
SCARB2-223ENST00000640640 OLAHQ9NV23 265 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 KIAA1217Q5T5P2 1943 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 SLC5A10A0PJK1 596 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 ELOAQ14241 798 aaKnown RBP16.55■□□□□ 0.24
SCARB2-223ENST00000640640 PAQR7Q86WK9 346 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 OR5L2Q8NGL0 311 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 OR2T4Q8NH00 348 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 WDR20Q8TBZ3 569 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 PNPLA2Q96AD5 504 aa16.55■□□□□ 0.24
SCARB2-223ENST00000640640 PLOD2O00469 737 aa16.54■□□□□ 0.24
SCARB2-223ENST00000640640 FMO6PO60774 539 aa16.54■□□□□ 0.24
SCARB2-223ENST00000640640 GPR75O95800 540 aa16.54■□□□□ 0.24
SCARB2-223ENST00000640640 CDK1P06493 297 aa16.54■□□□□ 0.24
SCARB2-223ENST00000640640 TNFRSF4P43489 277 aa16.54■□□□□ 0.24
SCARB2-223ENST00000640640 MCCD1P59942 119 aaPredicted RBP16.54■□□□□ 0.24
SCARB2-223ENST00000640640 CTXN1P60606 82 aa16.54■□□□□ 0.24
SCARB2-223ENST00000640640 FAM189A2Q15884 450 aa16.54■□□□□ 0.24
SCARB2-223ENST00000640640 SCGB2B2Q4G0G5 96 aa16.54■□□□□ 0.24
SCARB2-223ENST00000640640 TMEM52BQ4KMG9 183 aa16.54■□□□□ 0.24
SCARB2-223ENST00000640640 Q6ZPB1 254 aaPredicted RBP16.54■□□□□ 0.24
SCARB2-223ENST00000640640 CST11Q9H112 138 aa16.54■□□□□ 0.24
SCARB2-223ENST00000640640 ACOT13Q9NPJ3 140 aa16.54■□□□□ 0.24
SCARB2-223ENST00000640640 PFDN2Q9UHV9 154 aa16.54■□□□□ 0.24
SCARB2-223ENST00000640640 KNTC1P50748 2209 aa16.54■□□□□ 0.24
SCARB2-223ENST00000640640 XCR1P46094 333 aa16.54■□□□□ 0.24
SCARB2-223ENST00000640640 AKIRIN2Q53H80 203 aa16.54■□□□□ 0.24
SCARB2-223ENST00000640640 ZNF613Q6PF04 617 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms