RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 MGME1Q9BQP7 344 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 MROH8Q9H579 483 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 AKAP7Q9P0M2 348 aaPredicted RBP11.31□□□□□ -0.6
CAPN3-221ENST00000638141 CARHSP1Q9Y2V2 147 aaKnown RBP11.31□□□□□ -0.6
CAPN3-221ENST00000638141 A0A1W2PRB8 838 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 FAAHO00519 579 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 PRODHO43272 600 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 STK16O75716 305 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 CHRM5P08912 532 aaPredicted RBP11.31□□□□□ -0.6
CAPN3-221ENST00000638141 LIMS3P0CW19 117 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 LIMS4P0CW20 117 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 COX7A2P14406 83 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 TNFRSF1BP20333 461 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 PAICSP22234 425 aaKnown RBP11.31□□□□□ -0.6
CAPN3-221ENST00000638141 AQP1P29972 269 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 OR1E2P47887 323 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 RAB5BP61020 215 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 BDH1Q02338 343 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 SGCAQ16586 387 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 RTP2Q5QGT7 225 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 GCNT6Q5T4J0 391 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 IDNKQ5T6J7 187 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 ARMC12Q5T9G4 340 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 SLC6A19Q695T7 634 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 CD300LDQ6UXZ3 194 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 GLDNQ6ZMI3 551 aaPredicted RBP11.31□□□□□ -0.6
CAPN3-221ENST00000638141 SYT12Q8IV01 421 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 PIANPQ8IYJ0 282 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 TBC1D19Q8N5T2 526 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 ZNF565Q8N9K5 539 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 PNPLA2Q96AD5 504 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 PARK7Q99497 189 aaKnown RBP11.31□□□□□ -0.6
CAPN3-221ENST00000638141 ARL6Q9H0F7 186 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 DMRT1Q9Y5R6 373 aa11.31□□□□□ -0.6
CAPN3-221ENST00000638141 LRRN3E7EW58 273 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 J3KTA2 159 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 PHYHO14832 338 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 HYAL3O43820 417 aaPredicted RBP11.3□□□□□ -0.6
CAPN3-221ENST00000638141 RAMP2O60895 175 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 SIX6O95475 246 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 RECKO95980 971 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 CRYBA1P05813 215 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 RPA2P15927 270 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 MPGP29372 298 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 CCND3P30281 292 aaPredicted RBP11.3□□□□□ -0.6
CAPN3-221ENST00000638141 PTGFRP43088 359 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 ASMTP46597 345 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 MAT1AQ00266 395 aaKnown RBP11.3□□□□□ -0.6
CAPN3-221ENST00000638141 TNFRSF17Q02223 184 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 CACNG1Q06432 222 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 SNTB2Q13425 540 aaKnown RBP11.3□□□□□ -0.6
CAPN3-221ENST00000638141 KRT33BQ14525 404 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 ZNF630Q2M218 657 aaPredicted RBP11.3□□□□□ -0.6
CAPN3-221ENST00000638141 LIN54Q6MZP7 749 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 CTU1Q7Z7A3 348 aaKnown RBP11.3□□□□□ -0.6
CAPN3-221ENST00000638141 TPRA1Q86W33 373 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 ARL6IP6Q8N6S5 226 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 OR11G2Q8NGC1 345 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 OR10K1Q8NGX5 313 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 CXorf40BQ96DE9 158 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 SPACA7Q96KW9 195 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 C19orf43Q9BQ61 176 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 CRB3Q9BUF7 120 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 LRRN3Q9H3W5 708 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 SLC32A1Q9H598 525 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 C1GALT1Q9NS00 363 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 UFSP2Q9NUQ7 469 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 TEX10Q9NXF1 929 aaPredicted RBP11.3□□□□□ -0.6
CAPN3-221ENST00000638141 TAS2R3Q9NYW6 316 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 NTMQ9P121 344 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 SLC9A8Q9Y2E8 581 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 TRAPPC13A5PLN9 417 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 MANSC4A6NHS7 340 aaPredicted RBP11.3□□□□□ -0.6
CAPN3-221ENST00000638141 PRR23D1E9PI22 279 aaPredicted RBP11.3□□□□□ -0.6
CAPN3-221ENST00000638141 TLR5O60602 858 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 CPSF4O95639 269 aaKnown RBP11.3□□□□□ -0.6
CAPN3-221ENST00000638141 SLC25A27O95847 323 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 PRR23D2P0DMB1 279 aaPredicted RBP11.3□□□□□ -0.6
CAPN3-221ENST00000638141 PSMB1P20618 241 aaKnown RBP11.3□□□□□ -0.6
CAPN3-221ENST00000638141 AKAP5P24588 427 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 PGDP52209 483 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 EEF1A2Q05639 463 aaKnown RBP11.3□□□□□ -0.6
CAPN3-221ENST00000638141 RING1Q06587 406 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 ARHGAP1Q07960 439 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 NDUFA9Q16795 377 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 CDNFQ49AH0 187 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 EOGTQ5NDL2 527 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 WDR53Q7Z5U6 358 aaPredicted RBP11.3□□□□□ -0.6
CAPN3-221ENST00000638141 CLECL1Q8IZS7 167 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 SAMD12Q8N8I0 201 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 GOT1L1Q8NHS2 421 aaPredicted RBP11.3□□□□□ -0.6
CAPN3-221ENST00000638141 MAL2Q969L2 176 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 EMID1Q96A84 441 aaPredicted RBP11.3□□□□□ -0.6
CAPN3-221ENST00000638141 VOPP1Q96AW1 172 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 TEFMQ96QE5 360 aaKnown RBP11.3□□□□□ -0.6
CAPN3-221ENST00000638141 DUSP26Q9BV47 211 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 GSDMCQ9BYG8 508 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 BRD9Q9H8M2 597 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 PLEKHA1Q9HB21 404 aa11.3□□□□□ -0.6
CAPN3-221ENST00000638141 RUVBL1Q9Y265 456 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms