RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 KRTAP10-9P60411 292 aa17.23■□□□□ 0.35
CLN6-221ENST00000637494 PRSS53Q2L4Q9 553 aa17.23■□□□□ 0.35
CLN6-221ENST00000637494 ARL13AQ5H913 290 aaPredicted RBP17.23■□□□□ 0.35
CLN6-221ENST00000637494 OR5M10Q6IEU7 315 aa17.23■□□□□ 0.35
CLN6-221ENST00000637494 Q6ZSR9 355 aa17.23■□□□□ 0.35
CLN6-221ENST00000637494 SZRD1Q7Z422 152 aa17.23■□□□□ 0.35
CLN6-221ENST00000637494 NAXEQ8NCW5 288 aa17.23■□□□□ 0.35
CLN6-221ENST00000637494 MBD3L2Q8NHZ7 208 aaPredicted RBP17.23■□□□□ 0.35
CLN6-221ENST00000637494 TCP10LQ8TDR4 215 aa17.23■□□□□ 0.35
CLN6-221ENST00000637494 TWIST2Q8WVJ9 160 aa17.23■□□□□ 0.35
CLN6-221ENST00000637494 RNASE6Q93091 150 aaKnown RBP17.23■□□□□ 0.35
CLN6-221ENST00000637494 PPP3R2Q96LZ3 170 aa17.23■□□□□ 0.35
CLN6-221ENST00000637494 ZFP3Q96NJ6 502 aa17.23■□□□□ 0.35
CLN6-221ENST00000637494 ACBD3Q9H3P7 528 aa17.23■□□□□ 0.35
CLN6-221ENST00000637494 SLC17A7Q9P2U7 560 aa17.23■□□□□ 0.35
CLN6-221ENST00000637494 FBXL2Q9UKC9 423 aa17.23■□□□□ 0.35
CLN6-221ENST00000637494 LRBAP50851 2863 aa17.23■□□□□ 0.35
CLN6-221ENST00000637494 TBX19O60806 448 aa17.22■□□□□ 0.35
CLN6-221ENST00000637494 SLU7O95391 586 aaKnown RBP17.22■□□□□ 0.35
CLN6-221ENST00000637494 SDC1P18827 310 aa17.22■□□□□ 0.35
CLN6-221ENST00000637494 CHMP24386 653 aa17.22■□□□□ 0.35
CLN6-221ENST00000637494 RPL3P39023 403 aaKnown RBP17.22■□□□□ 0.35
CLN6-221ENST00000637494 GAB1Q13480 694 aa17.22■□□□□ 0.35
CLN6-221ENST00000637494 WDR93Q6P2C0 686 aa17.22■□□□□ 0.35
CLN6-221ENST00000637494 LRIG3Q6UXM1 1119 aa17.22■□□□□ 0.35
CLN6-221ENST00000637494 ZNF551Q7Z340 670 aaPredicted RBP17.22■□□□□ 0.35
CLN6-221ENST00000637494 KIF18BQ86Y91 864 aa17.22■□□□□ 0.35
CLN6-221ENST00000637494 RELL2Q8NC24 303 aaPredicted RBP17.22■□□□□ 0.35
CLN6-221ENST00000637494 OR2T11Q8NH01 316 aa17.22■□□□□ 0.35
CLN6-221ENST00000637494 GPR151Q8TDV0 419 aa17.22■□□□□ 0.35
CLN6-221ENST00000637494 MTERF3Q96E29 417 aa17.22■□□□□ 0.35
CLN6-221ENST00000637494 FCRL1Q96LA6 429 aa17.22■□□□□ 0.35
CLN6-221ENST00000637494 LMF2Q9BU23 707 aaKnown RBP17.22■□□□□ 0.35
CLN6-221ENST00000637494 MECRQ9BV79 373 aa17.22■□□□□ 0.35
CLN6-221ENST00000637494 TBL1XR1Q9BZK7 514 aa17.22■□□□□ 0.35
CLN6-221ENST00000637494 EQTNQ9NQ60 294 aa17.22■□□□□ 0.35
CLN6-221ENST00000637494 FAM120CQ9NX05 1096 aaKnown RBP17.22■□□□□ 0.35
CLN6-221ENST00000637494 L3MBTL1Q9Y468 752 aa17.22■□□□□ 0.35
CLN6-221ENST00000637494 FREM3P0C091 2139 aa17.21■□□□□ 0.35
CLN6-221ENST00000637494 ABCA12Q86UK0 2595 aa17.21■□□□□ 0.35
CLN6-221ENST00000637494 KDM4EB2RXH2 506 aaPredicted RBP17.21■□□□□ 0.35
CLN6-221ENST00000637494 EEF1E1-BLOC1S5C9J1V9 151 aa17.21■□□□□ 0.35
CLN6-221ENST00000637494 LSM1O15116 133 aaKnown RBP17.21■□□□□ 0.35
CLN6-221ENST00000637494 EEF1E1O43324 174 aaKnown RBP17.21■□□□□ 0.35
CLN6-221ENST00000637494 PSMG1O95456 288 aa17.21■□□□□ 0.35
CLN6-221ENST00000637494 IL33O95760 270 aa17.21■□□□□ 0.35
CLN6-221ENST00000637494 IL18BPO95998 194 aa17.21■□□□□ 0.35
CLN6-221ENST00000637494 TMIGD3P0DMS9 266 aaPredicted RBP17.21■□□□□ 0.35
CLN6-221ENST00000637494 GABRA3P34903 492 aa17.21■□□□□ 0.35
CLN6-221ENST00000637494 HPCAL1P37235 193 aa17.21■□□□□ 0.35
CLN6-221ENST00000637494 ZNF136P52737 540 aa17.21■□□□□ 0.35
CLN6-221ENST00000637494 PRKAG1P54619 331 aa17.21■□□□□ 0.35
CLN6-221ENST00000637494 GFRA1P56159 465 aa17.21■□□□□ 0.35
CLN6-221ENST00000637494 DLX5P56178 289 aa17.21■□□□□ 0.35
CLN6-221ENST00000637494 EEF1A1P68104 462 aaKnown RBP17.21■□□□□ 0.35
CLN6-221ENST00000637494 STX5Q13190 355 aa17.21■□□□□ 0.35
CLN6-221ENST00000637494 GANABQ14697 944 aaKnown RBP17.21■□□□□ 0.35
CLN6-221ENST00000637494 FBXL19-AS1Q494R0 122 aa17.21■□□□□ 0.35
CLN6-221ENST00000637494 RFTN2Q52LD8 501 aaPredicted RBP17.21■□□□□ 0.35
CLN6-221ENST00000637494 EEF1A1P5Q5VTE0 462 aa17.21■□□□□ 0.35
CLN6-221ENST00000637494 ANKRD26P1Q6NSI1 321 aa17.21■□□□□ 0.35
CLN6-221ENST00000637494 CDRT4Q8N9R6 151 aa17.21■□□□□ 0.35
CLN6-221ENST00000637494 NUP43Q8NFH3 380 aa17.21■□□□□ 0.35
CLN6-221ENST00000637494 CLHC1Q8NHS4 586 aa17.21■□□□□ 0.35
CLN6-221ENST00000637494 PPP1R14CQ8TAE6 165 aa17.21■□□□□ 0.35
CLN6-221ENST00000637494 AENQ8WTP8 325 aaKnown RBP17.21■□□□□ 0.35
CLN6-221ENST00000637494 RNF138Q8WVD3 245 aa17.21■□□□□ 0.35
CLN6-221ENST00000637494 CAVIN3Q969G5 261 aa17.21■□□□□ 0.35
CLN6-221ENST00000637494 TUBA1CQ9BQE3 449 aa17.21■□□□□ 0.35
CLN6-221ENST00000637494 DSN1Q9H410 356 aa17.21■□□□□ 0.35
CLN6-221ENST00000637494 TUBB1Q9H4B7 451 aa17.21■□□□□ 0.35
CLN6-221ENST00000637494 ACSS1Q9NUB1 689 aaPredicted RBP17.21■□□□□ 0.35
CLN6-221ENST00000637494 RPH3AQ9Y2J0 694 aaPredicted RBP17.21■□□□□ 0.35
CLN6-221ENST00000637494 PIP5K1BO14986 540 aa17.2■□□□□ 0.34
CLN6-221ENST00000637494 FADS1O60427 444 aa17.2■□□□□ 0.34
CLN6-221ENST00000637494 CHRNGP07510 517 aa17.2■□□□□ 0.34
CLN6-221ENST00000637494 PEPDP12955 493 aa17.2■□□□□ 0.34
CLN6-221ENST00000637494 HK1P19367 917 aa17.2■□□□□ 0.34
CLN6-221ENST00000637494 TCEA1P23193 301 aaKnown RBP17.2■□□□□ 0.34
CLN6-221ENST00000637494 GAS1P54826 345 aa17.2■□□□□ 0.34
CLN6-221ENST00000637494 EEFSECP57772 596 aaKnown RBP17.2■□□□□ 0.34
CLN6-221ENST00000637494 ATP6AP1LQ52LC2 224 aa17.2■□□□□ 0.34
CLN6-221ENST00000637494 RAET1LQ5VY80 246 aa17.2■□□□□ 0.34
CLN6-221ENST00000637494 P4HA3Q7Z4N8 544 aa17.2■□□□□ 0.34
CLN6-221ENST00000637494 ZZZ3Q8IYH5 903 aa17.2■□□□□ 0.34
CLN6-221ENST00000637494 GOT1L1Q8NHS2 421 aaPredicted RBP17.2■□□□□ 0.34
CLN6-221ENST00000637494 AGR3Q8TD06 166 aa17.2■□□□□ 0.34
CLN6-221ENST00000637494 SLC9A6Q92581 669 aa17.2■□□□□ 0.34
CLN6-221ENST00000637494 WNT2BQ93097 391 aa17.2■□□□□ 0.34
CLN6-221ENST00000637494 CIDECQ96AQ7 238 aaPredicted RBP17.2■□□□□ 0.34
CLN6-221ENST00000637494 BAIAP2L1Q9UHR4 511 aa17.2■□□□□ 0.34
CLN6-221ENST00000637494 CLCA1A8K7I4 914 aa17.19■□□□□ 0.34
CLN6-221ENST00000637494 TMEM233B4DJY2 109 aa17.19■□□□□ 0.34
CLN6-221ENST00000637494 LINC01387J3KSC0 135 aa17.19■□□□□ 0.34
CLN6-221ENST00000637494 EMC8O43402 210 aa17.19■□□□□ 0.34
CLN6-221ENST00000637494 UTS2O95399 124 aa17.19■□□□□ 0.34
CLN6-221ENST00000637494 BCKDHAP12694 445 aa17.19■□□□□ 0.34
CLN6-221ENST00000637494 STARP49675 285 aa17.19■□□□□ 0.34
CLN6-221ENST00000637494 LHX2P50458 406 aa17.19■□□□□ 0.34
CLN6-221ENST00000637494 PRR5P85299 388 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms