RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 CPNE5Q9HCH3 593 aa11.34□□□□□ -0.59
CLN8-212ENST00000637083 HHATLQ9HCP6 504 aa11.34□□□□□ -0.59
CLN8-212ENST00000637083 CTPS2Q9NRF8 586 aa11.34□□□□□ -0.59
CLN8-212ENST00000637083 SEMA4GQ9NTN9 838 aa11.34□□□□□ -0.59
CLN8-212ENST00000637083 NDUFB11Q9NX14 153 aa11.34□□□□□ -0.59
CLN8-212ENST00000637083 TESQ9UGI8 421 aaKnown RBP11.34□□□□□ -0.59
CLN8-212ENST00000637083 FBXL21Q9UKT6 434 aa11.34□□□□□ -0.59
CLN8-212ENST00000637083 SATB2Q9UPW6 733 aa11.34□□□□□ -0.59
CLN8-212ENST00000637083 CA5BQ9Y2D0 317 aa11.34□□□□□ -0.59
CLN8-212ENST00000637083 A0A1W2PS29 197 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 TCRBV21S2A2A0A5A6 115 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 TMEM129A0AVI4 362 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 CTSVO60911 334 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 STX11O75558 287 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 SEMA4FO95754 770 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 HMGN1P05114 100 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 CKMT1AP12532 417 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 OMPP47874 163 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 RORCP51449 518 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 DEFA1P59665 94 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 DEFA3P59666 94 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 FAM111BQ6SJ93 734 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 MBOAT2Q6ZWT7 520 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 CLDN22Q8N7P3 220 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 CDRT4Q8N9R6 151 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 RPLP0P6Q8NHW5 317 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 BAHD1Q8TBE0 780 aaPredicted RBP11.33□□□□□ -0.6
CLN8-212ENST00000637083 CDS1Q92903 461 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 STACQ99469 402 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 ASPNQ9BXN1 380 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 DUSP22Q9NRW4 184 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 CLDND1Q9NY35 253 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 CPNE7Q9UBL6 633 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 MMP17Q9ULZ9 603 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 TNRC18O15417 2968 aaPredicted RBP11.33□□□□□ -0.6
CLN8-212ENST00000637083 KRBA1A5PL33 1030 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 KDM4EB2RXH2 506 aaPredicted RBP11.33□□□□□ -0.6
CLN8-212ENST00000637083 H0YGG7 62 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 GPX5O75715 221 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 ATP1B1P05026 303 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 GLULP15104 373 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 NUDT1P36639 197 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 CCR5P51681 352 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 WNT4P56705 351 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 ARF3P61204 181 aaPredicted RBP11.33□□□□□ -0.6
CLN8-212ENST00000637083 SIM1P81133 766 aaPredicted RBP11.33□□□□□ -0.6
CLN8-212ENST00000637083 IFITM3Q01628 133 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 CDC20Q12834 499 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 ZNF628Q5EBL2 1059 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 TYW3Q6IPR3 259 aaKnown RBP11.33□□□□□ -0.6
CLN8-212ENST00000637083 ARMC6Q6NXE6 501 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 RNF44Q7L0R7 432 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 HMGN2P46Q86SG4 172 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 KIF18BQ86Y91 864 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 RNF113BQ8IZP6 322 aaKnown RBP11.33□□□□□ -0.6
CLN8-212ENST00000637083 ZNF619Q8N2I2 560 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 ANKK1Q8NFD2 765 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 FGF11Q92914 225 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 MSANTD3Q96H12 275 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 FAM46AQ96IP4 442 aaKnown RBP11.33□□□□□ -0.6
CLN8-212ENST00000637083 SLC6A18Q96N87 628 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 SDF2Q99470 211 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 GPA33Q99795 319 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 CNPPD1Q9BV87 410 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 POLE3Q9NRF9 147 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 IL20Q9NYY1 176 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 CLEC2DQ9UHP7 191 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 ZNF229Q9UJW7 825 aa11.33□□□□□ -0.6
CLN8-212ENST00000637083 GOLGA4Q13439 2230 aaKnown RBP11.33□□□□□ -0.6
CLN8-212ENST00000637083 HYKKA2RU49 373 aa11.32□□□□□ -0.6
CLN8-212ENST00000637083 ZNF670-ZNF695F2Z2N8 137 aa11.32□□□□□ -0.6
CLN8-212ENST00000637083 STK25O00506 426 aa11.32□□□□□ -0.6
CLN8-212ENST00000637083 P2RX6O15547 441 aa11.32□□□□□ -0.6
CLN8-212ENST00000637083 PLOD3O60568 738 aa11.32□□□□□ -0.6
CLN8-212ENST00000637083 FCMRO60667 390 aa11.32□□□□□ -0.6
CLN8-212ENST00000637083 GPR75O95800 540 aa11.32□□□□□ -0.6
CLN8-212ENST00000637083 ADRA2AP08913 450 aa11.32□□□□□ -0.6
CLN8-212ENST00000637083 TSPAN19P0C672 248 aa11.32□□□□□ -0.6
CLN8-212ENST00000637083 LTBRP36941 435 aa11.32□□□□□ -0.6
CLN8-212ENST00000637083 MTNR1AP48039 350 aa11.32□□□□□ -0.6
CLN8-212ENST00000637083 RPS3AP61247 264 aaKnown RBP11.32□□□□□ -0.6
CLN8-212ENST00000637083 BNC1Q01954 994 aa11.32□□□□□ -0.6
CLN8-212ENST00000637083 MLLT1Q03111 559 aaPredicted RBP11.32□□□□□ -0.6
CLN8-212ENST00000637083 TCEA2Q15560 299 aa11.32□□□□□ -0.6
CLN8-212ENST00000637083 TBC1D25Q3MII6 688 aa11.32□□□□□ -0.6
CLN8-212ENST00000637083 AGAP7PQ5VUJ5 663 aa11.32□□□□□ -0.6
CLN8-212ENST00000637083 TMEM92Q6UXU6 159 aa11.32□□□□□ -0.6
CLN8-212ENST00000637083 GDF7Q7Z4P5 450 aa11.32□□□□□ -0.6
CLN8-212ENST00000637083 ABI3BPQ7Z7G0 1075 aa11.32□□□□□ -0.6
CLN8-212ENST00000637083 LAPTM4BQ86VI4 370 aa11.32□□□□□ -0.6
CLN8-212ENST00000637083 LYSMD2Q8IV50 215 aa11.32□□□□□ -0.6
CLN8-212ENST00000637083 CLIP4Q8N3C7 705 aa11.32□□□□□ -0.6
CLN8-212ENST00000637083 PARP16Q8N5Y8 322 aa11.32□□□□□ -0.6
CLN8-212ENST00000637083 FAM174AQ8TBP5 190 aa11.32□□□□□ -0.6
CLN8-212ENST00000637083 RNFT2Q96EX2 444 aa11.32□□□□□ -0.6
CLN8-212ENST00000637083 CCDC32Q9BV29 185 aa11.32□□□□□ -0.6
CLN8-212ENST00000637083 ZNF350Q9GZX5 532 aa11.32□□□□□ -0.6
CLN8-212ENST00000637083 EGLN3Q9H6Z9 239 aa11.32□□□□□ -0.6
CLN8-212ENST00000637083 ANKRA2Q9H9E1 313 aa11.32□□□□□ -0.6
CLN8-212ENST00000637083 POLMQ9NP87 494 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms