RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	EIF2S3	P41091	472 aa	Known RBP	10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	CRISP1	P54107	249 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	CLDN8	P56748	225 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	ZP1	P60852	638 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	RPL38	P63173	70 aa	Known RBP	10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	ZNF155	Q12901	538 aa	Predicted RBP	10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	GRIN2C	Q14957	1233 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	PTGES3	Q15185	160 aa	Known RBP	10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	PCBP2	Q15366	365 aa	Known RBP eCLIP	10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	OCLN	Q16625	522 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	GUCA2B	Q16661	112 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	SYTL3	Q4VX76	610 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	CRTC2	Q53ET0	693 aa	Predicted RBP	10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	PDE12	Q6L8Q7	609 aa	Known RBP	10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	DOK6	Q6PKX4	331 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	FAM151B	Q6UXP7	276 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	OTOP2	Q7RTS6	562 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	SPNS2	Q8IVW8	549 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	CMTM8	Q8IZV2	173 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	C10orf111	Q8N326	155 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	PXT1	Q8NFP0	134 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	SP7	Q8TDD2	431 aa	Predicted RBP	10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	KAT2A	Q92830	837 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	METTL17	Q9H7H0	456 aa	Predicted RBP	10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	SARS2	Q9NP81	518 aa	Known RBP	10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	CYSLTR2	Q9NS75	346 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	PPIL1	Q9Y3C6	166 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	DMRT1	Q9Y5R6	373 aa		10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	10.14	□□□□□ -0.79
CHD2-223	ENST00000636306	LOC105369274	A0A096LPK9	316 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	TLR4	O00206	839 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	ZNF197	O14709	1029 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	PHYH	O14832	338 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	CCL16	O15467	120 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	SMAD6	O43541	496 aa	Known RBP	10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	OR1I1	O60431	355 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	ENTPD6	O75354	484 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	ATG12	O94817	140 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	ALDOB	P05062	364 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	ALPI	P09923	528 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	PRPS2	P11908	318 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	GABRA5	P31644	462 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	NSG1	P42857	185 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	AVPR1B	P47901	424 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	P2RY4	P51582	365 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	CTBP2	P56545	445 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	RAB5B	P61020	215 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	HTRA3	P83110	453 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	ECH1	Q13011	328 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	PTGR1	Q14914	329 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	CCDC85B	Q15834	202 aa	Predicted RBP	10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	USP39	Q53GS9	565 aa	Known RBP	10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	ANKRD39	Q53RE8	183 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	USP30	Q70CQ3	517 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	SLC16A13	Q7RTY0	426 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	LRRC28	Q86X40	367 aa	Predicted RBP	10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	OR4N4	Q8N0Y3	316 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	SVBP	Q8N300	66 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	NXPE1	Q8N323	547 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	ZBTB2	Q8N680	514 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	GPR26	Q8NDV2	337 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	NUDT8	Q8WV74	236 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	EEF1AKMT1	Q8WVE0	214 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	NELL1	Q92832	810 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	RAB7B	Q96AH8	199 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	KCTD12	Q96CX2	325 aa	Known RBP	10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	ECHDC3	Q96DC8	303 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	ELP4	Q96EB1	424 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	C1GALT1C1	Q96EU7	318 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	SENP5	Q96HI0	755 aa	Predicted RBP	10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	TMEM68	Q96MH6	324 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	DDO	Q99489	341 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	DOHH	Q9BU89	302 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	TMEM106C	Q9BVX2	250 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	SLC46A2	Q9BY10	475 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	SUV39H2	Q9H5I1	410 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	SLC6A13	Q9NSD5	602 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	EXTL2	Q9UBQ6	330 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	CBLC	Q9ULV8	474 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	CLCA2	Q9UQC9	943 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	RPH3A	Q9Y2J0	694 aa	Predicted RBP	10.13	□□□□□ -0.79
CHD2-223	ENST00000636306	OARD1	Q9Y530	152 aa		10.13	□□□□□ -0.79
CHD2-223	ENST00000636306		K7ERQ8	282 aa		10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	AGRP	O00253	132 aa		10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	UBE2C	O00762	179 aa		10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	GADD45G	O95257	159 aa		10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	RAB36	O95755	333 aa		10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	SOD1	P00441	154 aa		10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	OTC	P00480	354 aa		10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	HEXA	P06865	529 aa		10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	PAICS	P22234	425 aa	Known RBP	10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	ACADL	P28330	430 aa		10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	FNTB	P49356	437 aa		10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	CDKN1C	P49918	316 aa	Predicted RBP	10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	AGTR2	P50052	363 aa		10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	SMS	P52788	366 aa		10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	RAB4B	P61018	213 aa		10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	DCD	P81605	110 aa	Known RBP	10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	ZXDB	P98169	803 aa		10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	SPDYE7P	Q495Y7	208 aa		10.12	□□□□□ -0.79

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