RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 SFXN1Q9H9B4 322 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 GPRC5BQ9NZH0 403 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 CNOT2Q9NZN8 540 aaKnown RBP9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 PCDHA9Q9Y5H5 950 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 A0A0G2JLL6 359 aaPredicted RBP9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 F5H0A9 414 aaPredicted RBP9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 TBX18O95935 607 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 IFNA10P01566 189 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 PTBP1P26599 531 aaKnown RBP eCLIP9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 BMPR1AP36894 532 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 ETV6P41212 452 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 CHRNA4P43681 627 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 PRRT2Q7Z6L0 340 aaPredicted RBP9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 LINC00471Q8N535 108 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 OR7G2Q8NG99 324 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 OR2AP1Q8NGE2 309 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 C22orf15Q8WYQ4 148 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 ZNF566Q969W8 418 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 SECISBP2Q96T21 854 aaKnown RBP9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 HHATLQ9HCP6 504 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 HIF1ANQ9NWT6 349 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 HAO2Q9NYQ3 351 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 TAS2R10Q9NYW0 307 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 HIF3AQ9Y2N7 669 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 RIPK3Q9Y572 518 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 PLIN4Q96Q06 1357 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 NAP1L6A6NFF2 107 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 JUNDP17535 347 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 FXYD6P3P58550 94 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 KCNC4Q03721 635 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 EXOSC2Q13868 293 aaKnown RBP9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 GTPBP8Q8N3Z3 284 aaPredicted RBP9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 OR2T11Q8NH01 316 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 CASTOR1Q8WTX7 329 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 DNAJA3Q96EY1 480 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 PKP4Q99569 1192 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 POPDC3Q9HBV1 291 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 SDR39U1Q9NRG7 319 aaPredicted RBP9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 IGLV3-22A0A075B6J6 115 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 TRBC2A0A5B9 178 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 POM121CA8CG34 1229 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 GOSR2O14653 212 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 PTPN6P29350 595 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 ARL2P36404 184 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 CATSPEREQ5SY80 951 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 PLAG1Q6DJT9 500 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 LRP10Q7Z4F1 713 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 LINC00469Q8N7U9 141 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 OR13C3Q8NGS6 347 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 FBXL18Q96ME1 805 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 SLC23A1Q9UHI7 598 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 RNGTTO60942 597 aaKnown RBP9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 SC5DO75845 299 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 OPN1SWP03999 348 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 TNFSF4P23510 183 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 THBS2P35442 1172 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 RNF144AP50876 292 aaPredicted RBP9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 IFITM2Q01629 132 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 GBX1Q14549 363 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 PKDCCQ504Y2 493 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 DPY19L4Q7Z388 723 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 OR4Q3Q8NH05 313 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 RHBDD1Q8TEB9 315 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 MSLNLQ96KJ4 702 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 OR2M4Q96R27 311 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 TTTY10Q9BZA0 68 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 SLC22A14Q9Y267 594 aa9.36□□□□□ -0.91
SPTAN1-228ENST00000635853 LCHNA4D1U4 455 aa9.35□□□□□ -0.91
SPTAN1-228ENST00000635853 H7C417 338 aa9.35□□□□□ -0.91
SPTAN1-228ENST00000635853 HPGDSO60760 199 aa9.35□□□□□ -0.91
SPTAN1-228ENST00000635853 PTNP21246 168 aa9.35□□□□□ -0.91
SPTAN1-228ENST00000635853 S1PR1P21453 382 aa9.35□□□□□ -0.91
SPTAN1-228ENST00000635853 GCH1P30793 250 aa9.35□□□□□ -0.91
SPTAN1-228ENST00000635853 HOXA1P49639 335 aaPredicted RBP9.35□□□□□ -0.91
SPTAN1-228ENST00000635853 TAS2R43P59537 309 aa9.35□□□□□ -0.91
SPTAN1-228ENST00000635853 E2F1Q01094 437 aa9.35□□□□□ -0.91
SPTAN1-228ENST00000635853 HS3ST5Q8IZT8 346 aa9.35□□□□□ -0.91
SPTAN1-228ENST00000635853 FBXL6Q8N531 539 aa9.35□□□□□ -0.91
SPTAN1-228ENST00000635853 NSMAFQ92636 917 aa9.35□□□□□ -0.91
SPTAN1-228ENST00000635853 TRAF4Q9BUZ4 470 aaPredicted RBP9.35□□□□□ -0.91
SPTAN1-228ENST00000635853 HIPK2Q9H2X6 1198 aa9.35□□□□□ -0.91
SPTAN1-228ENST00000635853 B4DXG7 233 aa9.35□□□□□ -0.91
SPTAN1-228ENST00000635853 ARL6IP5O75915 188 aa9.35□□□□□ -0.91
SPTAN1-228ENST00000635853 CLDN7O95471 211 aa9.35□□□□□ -0.91
SPTAN1-228ENST00000635853 RPS2P15880 293 aaKnown RBP9.35□□□□□ -0.91
SPTAN1-228ENST00000635853 COTL1Q14019 142 aa9.35□□□□□ -0.91
SPTAN1-228ENST00000635853 C6orf136Q5SQH8 315 aa9.35□□□□□ -0.91
SPTAN1-228ENST00000635853 PTRH1Q86Y79 214 aaKnown RBP9.35□□□□□ -0.91
SPTAN1-228ENST00000635853 NRROSQ86YC3 692 aa9.35□□□□□ -0.91
SPTAN1-228ENST00000635853 GNPDA2Q8TDQ7 276 aa9.35□□□□□ -0.91
SPTAN1-228ENST00000635853 FBXW5Q969U6 566 aa9.35□□□□□ -0.91
SPTAN1-228ENST00000635853 S100A16Q96FQ6 103 aaKnown RBP9.35□□□□□ -0.91
SPTAN1-228ENST00000635853 MBOAT4Q96T53 435 aa9.35□□□□□ -0.91
SPTAN1-228ENST00000635853 PHB2Q99623 299 aa9.35□□□□□ -0.91
SPTAN1-228ENST00000635853 OR51I1Q9H343 314 aa9.35□□□□□ -0.91
SPTAN1-228ENST00000635853 RPS10P5Q9NQ39 176 aa9.35□□□□□ -0.91
SPTAN1-228ENST00000635853 OR6C2Q9NZP2 312 aa9.35□□□□□ -0.91
SPTAN1-228ENST00000635853 MAFBQ9Y5Q3 323 aaPredicted RBP9.35□□□□□ -0.91
SPTAN1-228ENST00000635853 SLC35F4A4IF30 521 aa9.35□□□□□ -0.91
SPTAN1-228ENST00000635853 RTCAO00442 366 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms