RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 OR6C1Q96RD1 312 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 ALOXE3Q9BYJ1 711 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 CXorf21Q9HAI6 301 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 ZNF304Q9HCX3 659 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 ADAP2Q9NPF8 381 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 NECTIN3Q9NQS3 549 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 EXD2Q9NVH0 621 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 FOXJ2Q9P0K8 574 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 RARRES3Q9UL19 164 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 LIPT1Q9Y234 373 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 SPTA1P02549 2419 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 AHCTF1Q8WYP5 2266 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 IGKV3D-11A0A0A0MRZ8 115 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 ZNF891A8MT65 544 aaPredicted RBP8.83□□□□□ -1
PDLIM5-223ENST00000627587 H0YJX3 145 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 SERPINB7O75635 380 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 RASAL1O95294 804 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 OR1E2P47887 323 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 RAB15P59190 212 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 SRSF1Q07955 248 aaKnown RBP eCLIP8.83□□□□□ -1
PDLIM5-223ENST00000627587 MAP4K2Q12851 820 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 SRSF6Q13247 344 aaKnown RBP8.83□□□□□ -1
PDLIM5-223ENST00000627587 SERTAD2Q14140 314 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 DUSP5Q16690 384 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 GPAT3Q53EU6 434 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 IFI44LQ53G44 452 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 RHBDD2Q6NTF9 364 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 C16orf62Q7Z3J2 963 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 ARMC8Q8IUR7 673 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 IL22RA1Q8N6P7 574 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 BBS10Q8TAM1 723 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 SPPL2AQ8TCT8 520 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 SLC9A6Q92581 669 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 RIT1Q92963 219 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 SDCCAG3Q96C92 435 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 ZG16BQ96DA0 208 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 BTBD9Q96Q07 612 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 BARD1Q99728 777 aaKnown RBP8.83□□□□□ -1
PDLIM5-223ENST00000627587 PELOQ9BRX2 385 aaKnown RBP8.83□□□□□ -1
PDLIM5-223ENST00000627587 ZPBPQ9BS86 351 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 SLC38A1Q9H2H9 487 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 BCL2L10Q9HD36 194 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 APMAPQ9HDC9 416 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 CALML5Q9NZT1 146 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 NDUFAF4Q9P032 175 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 PADI2Q9Y2J8 665 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 LRCH1Q9Y2L9 728 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 MMACHCQ9Y4U1 282 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 PCDHGB5Q9Y5G0 923 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 GPC6Q9Y625 555 aaPredicted RBP8.83□□□□□ -1
PDLIM5-223ENST00000627587 EI24O14681 340 aa8.82□□□□□ -1
PDLIM5-223ENST00000627587 COQ9O75208 318 aa8.82□□□□□ -1
PDLIM5-223ENST00000627587 E2F6O75461 281 aa8.82□□□□□ -1
PDLIM5-223ENST00000627587 H6PDO95479 791 aa8.82□□□□□ -1
PDLIM5-223ENST00000627587 CLPSP04118 112 aa8.82□□□□□ -1
PDLIM5-223ENST00000627587 CCL4P13236 92 aa8.82□□□□□ -1
PDLIM5-223ENST00000627587 STT3AP46977 705 aa8.82□□□□□ -1
PDLIM5-223ENST00000627587 FOXL2P58012 376 aa8.82□□□□□ -1
PDLIM5-223ENST00000627587 HPCAP84074 193 aa8.82□□□□□ -1
PDLIM5-223ENST00000627587 KCNAB2Q13303 367 aa8.82□□□□□ -1
PDLIM5-223ENST00000627587 NHSL2Q5HYW2 709 aa8.82□□□□□ -1
PDLIM5-223ENST00000627587 DCAF12Q5T6F0 453 aa8.82□□□□□ -1
PDLIM5-223ENST00000627587 MFSD4BQ5TF39 518 aa8.82□□□□□ -1
PDLIM5-223ENST00000627587 C1orf189Q5VU69 101 aa8.82□□□□□ -1
PDLIM5-223ENST00000627587 PRAMEF8Q5VWM4 474 aa8.82□□□□□ -1
PDLIM5-223ENST00000627587 PRAMEF7Q5VXH5 474 aa8.82□□□□□ -1
PDLIM5-223ENST00000627587 ZNF385CQ66K41 422 aaPredicted RBP8.82□□□□□ -1
PDLIM5-223ENST00000627587 PWWP2BQ6NUJ5 590 aa8.82□□□□□ -1
PDLIM5-223ENST00000627587 ZCCHC12Q6PEW1 402 aa8.82□□□□□ -1
PDLIM5-223ENST00000627587 HMGN2P46Q86SG4 172 aa8.82□□□□□ -1
PDLIM5-223ENST00000627587 ZDHHC13Q8IUH4 622 aa8.82□□□□□ -1
PDLIM5-223ENST00000627587 BMPERQ8N8U9 685 aa8.82□□□□□ -1
PDLIM5-223ENST00000627587 CDRT4Q8N9R6 151 aa8.82□□□□□ -1
PDLIM5-223ENST00000627587 C7orf57Q8NEG2 295 aa8.82□□□□□ -1
PDLIM5-223ENST00000627587 OR4D11Q8NGI4 311 aa8.82□□□□□ -1
PDLIM5-223ENST00000627587 GEMIN6Q8WXD5 167 aaKnown RBP8.82□□□□□ -1
PDLIM5-223ENST00000627587 CDS1Q92903 461 aa8.82□□□□□ -1
PDLIM5-223ENST00000627587 COL21A1Q96P44 957 aa8.82□□□□□ -1
PDLIM5-223ENST00000627587 SPATA5L1Q9BVQ7 753 aa8.82□□□□□ -1
PDLIM5-223ENST00000627587 BTBD2Q9BX70 525 aa8.82□□□□□ -1
PDLIM5-223ENST00000627587 QRSL1Q9H0R6 528 aaKnown RBP8.82□□□□□ -1
PDLIM5-223ENST00000627587 Q9H521 79 aa8.82□□□□□ -1
PDLIM5-223ENST00000627587 OCIAD1Q9NX40 245 aa8.82□□□□□ -1
PDLIM5-223ENST00000627587 SLC39A1Q9NY26 324 aa8.82□□□□□ -1
PDLIM5-223ENST00000627587 SEC14L3Q9UDX4 400 aa8.82□□□□□ -1
PDLIM5-223ENST00000627587 DTX4Q9Y2E6 619 aa8.82□□□□□ -1
PDLIM5-223ENST00000627587 CHST2Q9Y4C5 530 aa8.82□□□□□ -1
PDLIM5-223ENST00000627587 A0A0G2JPF8 293 aa8.81□□□□□ -1
PDLIM5-223ENST00000627587 CYSRT1A8MQ03 144 aa8.81□□□□□ -1
PDLIM5-223ENST00000627587 HNRNPCL2B2RXH8 293 aa8.81□□□□□ -1
PDLIM5-223ENST00000627587 HNRNPCL3B7ZW38 293 aa8.81□□□□□ -1
PDLIM5-223ENST00000627587 G3V2T6 193 aa8.81□□□□□ -1
PDLIM5-223ENST00000627587 FCMRO60667 390 aa8.81□□□□□ -1
PDLIM5-223ENST00000627587 SCRG1O75711 98 aa8.81□□□□□ -1
PDLIM5-223ENST00000627587 IFNA16P05015 189 aa8.81□□□□□ -1
PDLIM5-223ENST00000627587 HBQ1P09105 142 aa8.81□□□□□ -1
PDLIM5-223ENST00000627587 HNRNPCL4P0DMR1 293 aa8.81□□□□□ -1
PDLIM5-223ENST00000627587 UQCRBP14927 111 aa8.81□□□□□ -1
PDLIM5-223ENST00000627587 ETS2P15036 469 aa8.81□□□□□ -1
PDLIM5-223ENST00000627587 ITGA2P17301 1181 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms