RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 GPR85P60893 370 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 GPR33Q49SQ1 333 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 MINDY4Q4G0A6 757 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 SLC25A25Q6KCM7 469 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 SLC30A6Q6NXT4 461 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 FAAP20Q6NZ36 180 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 ARL9Q6T311 187 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 DGLUCYQ7Z3D6 616 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 CAMKMTQ7Z624 323 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 CLRN3Q8NCR9 226 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 MYLIPQ8WY64 445 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 ELAC1Q9H777 363 aaKnown RBP14.28□□□□□ -0.12
PMS1-221ENST00000624204 CXorf36Q9H7Y0 433 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 CNIH4Q9P003 139 aa14.28□□□□□ -0.12
PMS1-221ENST00000624204 PCDHGA9Q9Y5G4 932 aaKnown RBP14.28□□□□□ -0.12
PMS1-221ENST00000624204 TRBV5-4A0A0C4DH59 114 aa14.27□□□□□ -0.12
PMS1-221ENST00000624204 IRGMA1A4Y4 181 aa14.27□□□□□ -0.12
PMS1-221ENST00000624204 SLC9B1P1A6NJY1 282 aa14.27□□□□□ -0.12
PMS1-221ENST00000624204 ARPC5O15511 151 aa14.27□□□□□ -0.12
PMS1-221ENST00000624204 SLC28A2O43868 658 aa14.27□□□□□ -0.12
PMS1-221ENST00000624204 GMDSO60547 372 aa14.27□□□□□ -0.12
PMS1-221ENST00000624204 FURINP09958 794 aa14.27□□□□□ -0.12
PMS1-221ENST00000624204 CORO1AP31146 461 aaKnown RBP14.27□□□□□ -0.12
PMS1-221ENST00000624204 ATP5C1P36542 298 aaKnown RBP14.27□□□□□ -0.12
PMS1-221ENST00000624204 VEGFCP49767 419 aa14.27□□□□□ -0.12
PMS1-221ENST00000624204 SLC3A1Q07837 685 aa14.27□□□□□ -0.12
PMS1-221ENST00000624204 ZNF772Q68DY9 489 aaPredicted RBP14.27□□□□□ -0.12
PMS1-221ENST00000624204 AGTRAPQ6RW13 159 aa14.27□□□□□ -0.12
PMS1-221ENST00000624204 OVCH2Q7RTZ1 564 aa14.27□□□□□ -0.12
PMS1-221ENST00000624204 ZNF454Q8N9F8 522 aa14.27□□□□□ -0.12
PMS1-221ENST00000624204 ISG20L2Q9H9L3 353 aaKnown RBP14.27□□□□□ -0.12
PMS1-221ENST00000624204 TRPV2Q9Y5S1 764 aa14.27□□□□□ -0.12
PMS1-221ENST00000624204 POLR2AP24928 1970 aaKnown RBP14.27□□□□□ -0.13
PMS1-221ENST00000624204 COL4A4P53420 1690 aaPredicted RBP14.27□□□□□ -0.13
PMS1-221ENST00000624204 FAM74A7A6NL05 159 aa14.27□□□□□ -0.13
PMS1-221ENST00000624204 CPSF4LA6NMK7 179 aaKnown RBP14.27□□□□□ -0.13
PMS1-221ENST00000624204 ANXA2P2A6NMY6 339 aa14.27□□□□□ -0.13
PMS1-221ENST00000624204 G3V3Q6 166 aa14.27□□□□□ -0.13
PMS1-221ENST00000624204 LINC01387J3KSC0 135 aa14.27□□□□□ -0.13
PMS1-221ENST00000624204 WNT1P04628 370 aa14.27□□□□□ -0.13
PMS1-221ENST00000624204 RPL17P18621 184 aaKnown RBP14.27□□□□□ -0.13
PMS1-221ENST00000624204 BUD31P41223 144 aaPredicted RBP14.27□□□□□ -0.13
PMS1-221ENST00000624204 C21orf58P58505 322 aa14.27□□□□□ -0.13
PMS1-221ENST00000624204 SMIM11AP58511 58 aa14.27□□□□□ -0.13
PMS1-221ENST00000624204 FAM74A3Q4VXF1 159 aa14.27□□□□□ -0.13
PMS1-221ENST00000624204 AKIRIN2Q53H80 203 aa14.27□□□□□ -0.13
PMS1-221ENST00000624204 SFXN4Q6P4A7 337 aa14.27□□□□□ -0.13
PMS1-221ENST00000624204 TPGS1Q6ZTW0 290 aa14.27□□□□□ -0.13
PMS1-221ENST00000624204 OR51G2Q8NGK0 314 aa14.27□□□□□ -0.13
PMS1-221ENST00000624204 OR8K3Q8NH51 312 aa14.27□□□□□ -0.13
PMS1-221ENST00000624204 SEC22CQ9BRL7 303 aa14.27□□□□□ -0.13
PMS1-221ENST00000624204 FUZQ9BT04 418 aa14.27□□□□□ -0.13
PMS1-221ENST00000624204 TMEM168Q9H0V1 697 aa14.27□□□□□ -0.13
PMS1-221ENST00000624204 ISYNA1Q9NPH2 558 aa14.27□□□□□ -0.13
PMS1-221ENST00000624204 PRDM9Q9NQV7 894 aa14.27□□□□□ -0.13
PMS1-221ENST00000624204 RPS6KB2Q9UBS0 482 aa14.27□□□□□ -0.13
PMS1-221ENST00000624204 PCDHB8Q9UN66 801 aa14.27□□□□□ -0.13
PMS1-221ENST00000624204 PGRMC2O15173 223 aa14.27□□□□□ -0.13
PMS1-221ENST00000624204 SMAD6O43541 496 aaKnown RBP14.27□□□□□ -0.13
PMS1-221ENST00000624204 RGS9O75916 674 aaPredicted RBP14.27□□□□□ -0.13
PMS1-221ENST00000624204 DDNO94850 711 aaPredicted RBP14.27□□□□□ -0.13
PMS1-221ENST00000624204 KLKB1P03952 638 aa14.27□□□□□ -0.13
PMS1-221ENST00000624204 ATP5A1P25705 553 aaKnown RBP14.27□□□□□ -0.13
PMS1-221ENST00000624204 AP1S2P56377 157 aa14.27□□□□□ -0.13
PMS1-221ENST00000624204 ZNF155Q12901 538 aaPredicted RBP14.27□□□□□ -0.13
PMS1-221ENST00000624204 MELKQ14680 651 aa14.27□□□□□ -0.13
PMS1-221ENST00000624204 PRSS53Q2L4Q9 553 aa14.27□□□□□ -0.13
PMS1-221ENST00000624204 OR56B4Q8NH76 319 aa14.27□□□□□ -0.13
PMS1-221ENST00000624204 CNOT9Q92600 299 aaKnown RBP14.27□□□□□ -0.13
PMS1-221ENST00000624204 ATOH1Q92858 354 aaPredicted RBP14.27□□□□□ -0.13
PMS1-221ENST00000624204 YIPF5Q969M3 257 aa14.27□□□□□ -0.13
PMS1-221ENST00000624204 WDR89Q96FK6 387 aaPredicted RBP14.27□□□□□ -0.13
PMS1-221ENST00000624204 PELOQ9BRX2 385 aaKnown RBP14.27□□□□□ -0.13
PMS1-221ENST00000624204 DPH7Q9BTV6 452 aa14.27□□□□□ -0.13
PMS1-221ENST00000624204 SLC6A16Q9GZN6 736 aa14.27□□□□□ -0.13
PMS1-221ENST00000624204 QRSL1Q9H0R6 528 aaKnown RBP14.27□□□□□ -0.13
PMS1-221ENST00000624204 C20orf85Q9H1P6 137 aa14.27□□□□□ -0.13
PMS1-221ENST00000624204 GPR160Q9UJ42 338 aa14.27□□□□□ -0.13
PMS1-221ENST00000624204 ZNF197O14709 1029 aa14.26□□□□□ -0.13
PMS1-221ENST00000624204 PTP4A3O75365 173 aa14.26□□□□□ -0.13
PMS1-221ENST00000624204 WDPCPO95876 746 aa14.26□□□□□ -0.13
PMS1-221ENST00000624204 IL3P08700 152 aa14.26□□□□□ -0.13
PMS1-221ENST00000624204 UCHL1P09936 223 aa14.26□□□□□ -0.13
PMS1-221ENST00000624204 RFX3P48380 749 aa14.26□□□□□ -0.13
PMS1-221ENST00000624204 PTSQ03393 145 aa14.26□□□□□ -0.13
PMS1-221ENST00000624204 EOGTQ5NDL2 527 aa14.26□□□□□ -0.13
PMS1-221ENST00000624204 BTN2A1Q7KYR7 527 aa14.26□□□□□ -0.13
PMS1-221ENST00000624204 GOT1L1Q8NHS2 421 aaPredicted RBP14.26□□□□□ -0.13
PMS1-221ENST00000624204 ARL6Q9H0F7 186 aa14.26□□□□□ -0.13
PMS1-221ENST00000624204 SMG9Q9H0W8 520 aaKnown RBP14.26□□□□□ -0.13
PMS1-221ENST00000624204 TEX10Q9NXF1 929 aaPredicted RBP14.26□□□□□ -0.13
PMS1-221ENST00000624204 HCSTQ9UBK5 93 aa14.26□□□□□ -0.13
PMS1-221ENST00000624204 ZNF69Q9UC07 566 aa14.26□□□□□ -0.13
PMS1-221ENST00000624204 PADI3Q9ULW8 664 aa14.26□□□□□ -0.13
PMS1-221ENST00000624204 CHST2Q9Y4C5 530 aa14.26□□□□□ -0.13
PMS1-221ENST00000624204 NPIPB15A6NHN6 443 aaPredicted RBP14.26□□□□□ -0.13
PMS1-221ENST00000624204 LDOC1O95751 146 aaPredicted RBP14.26□□□□□ -0.13
PMS1-221ENST00000624204 MRPL3P09001 348 aaKnown RBP14.26□□□□□ -0.13
PMS1-221ENST00000624204 NPR2P20594 1047 aa14.26□□□□□ -0.13
PMS1-221ENST00000624204 UBE2MP61081 183 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms