RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 METTL3Q86U44 580 aaKnown RBP13.24□□□□□ -0.29
LDB3-209ENST00000623056 SIAH3Q8IW03 269 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 ZNF687Q8N1G0 1237 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 SLC43A3Q8NBI5 491 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 BBS1Q8NFJ9 593 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 OR5D16Q8NGK9 328 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 GNPDA2Q8TDQ7 276 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 BCL7CQ8WUZ0 217 aaPredicted RBP13.24□□□□□ -0.29
LDB3-209ENST00000623056 KCTD12Q96CX2 325 aaKnown RBP13.24□□□□□ -0.29
LDB3-209ENST00000623056 C1QTNF6Q9BXI9 259 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 NEUROD4Q9HD90 331 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 P2RX2Q9UBL9 471 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 TMEM5Q9Y2B1 443 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 SIRT4Q9Y6E7 314 aaPredicted RBP13.24□□□□□ -0.29
LDB3-209ENST00000623056 FAM170BA6NMN3 283 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 M0R233 179 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 SSNA1O43805 119 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 TOXO94900 526 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 C1orf105O95561 183 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 HRGP04196 525 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 CD3GP09693 182 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 SHC1P29353 583 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 ATP6V1E1P36543 226 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 MMP12P39900 470 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 OR10A3P58181 314 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 ZP1P60852 638 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 ELAVL2Q12926 359 aaKnown RBP13.24□□□□□ -0.29
LDB3-209ENST00000623056 BTN1A1Q13410 526 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 HSD17B12Q53GQ0 312 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 SLC30A6Q6NXT4 461 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 C22orf39Q6P5X5 142 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 NXPE4Q6UWF7 544 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 LIPIQ6XZB0 460 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 Q6ZVL8 140 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 SLC9B2Q86UD5 537 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 TOMM5Q8N4H5 51 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 OR2T35Q8NGX2 323 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 OR4Q3Q8NH05 313 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 POF1BQ8WVV4 589 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 XAGE5Q8WWM1 108 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 SLC5A11Q8WWX8 675 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 RIT1Q92963 219 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 C12orf66Q96MD2 445 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 LINC00052Q96N35 136 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 FAM83CQ9BQN1 747 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 RIOK2Q9BVS4 552 aaKnown RBP13.24□□□□□ -0.29
LDB3-209ENST00000623056 KIF26AQ9ULI4 1882 aaPredicted RBP13.24□□□□□ -0.29
LDB3-209ENST00000623056 RABL2BQ9UNT1 228 aa13.24□□□□□ -0.29
LDB3-209ENST00000623056 hCG_1807616A0A1W2PRN6 198 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 SURF4O15260 269 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 ATG13O75143 517 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 NTN1O95631 604 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 H2AFB2P0C5Z0 115 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 NR2F1P10589 423 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 PEPDP12955 493 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 ZP3P21754 424 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 TRIM23P36406 574 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 DEFB115Q30KQ5 88 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 SLC8B1Q6J4K2 584 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 SFXN4Q6P4A7 337 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 FAM83HQ6ZRV2 1179 aaPredicted RBP13.23□□□□□ -0.29
LDB3-209ENST00000623056 FTMTQ8N4E7 242 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 OR2T4Q8NH00 348 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 YIPF5Q969M3 257 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 ART5Q96L15 291 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 COQ10AQ96MF6 247 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 SGPP1Q9BX95 441 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 OR51I1Q9H343 314 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 DDX31Q9H8H2 851 aaKnown RBP13.23□□□□□ -0.29
LDB3-209ENST00000623056 MARK1Q9P0L2 795 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 COPZ2Q9P299 210 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 PPIEQ9UNP9 301 aaKnown RBP13.23□□□□□ -0.29
LDB3-209ENST00000623056 THSD7BQ9C0I4 1608 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 RTCAO00442 366 aaKnown RBP13.23□□□□□ -0.29
LDB3-209ENST00000623056 TOR1AO14656 332 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 FZD7O75084 574 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 TPPPO94811 219 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 CKBP12277 381 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 GNSP15586 552 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 BUD31P41223 144 aaPredicted RBP13.23□□□□□ -0.29
LDB3-209ENST00000623056 SELENOPP49908 381 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 TSPAN31Q12999 210 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 FAM27D1Q5T7N8 215 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 RASSF6Q6ZTQ3 369 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 SZRD1Q7Z422 152 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 FGD2Q7Z6J4 655 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 SIRT6Q8N6T7 355 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 TRMT10AQ8TBZ6 339 aaKnown RBP13.23□□□□□ -0.29
LDB3-209ENST00000623056 FAM46AQ96IP4 442 aaKnown RBP13.23□□□□□ -0.29
LDB3-209ENST00000623056 MRPL9Q9BYD2 267 aaKnown RBP13.23□□□□□ -0.29
LDB3-209ENST00000623056 REG4Q9BYZ8 158 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 ZNF436Q9C0F3 470 aaPredicted RBP13.23□□□□□ -0.29
LDB3-209ENST00000623056 BEX1Q9HBH7 125 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 TDP1Q9NUW8 608 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 KIF25Q9UIL4 384 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 NPTNQ9Y639 398 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 KCNMB2Q9Y691 235 aa13.23□□□□□ -0.29
LDB3-209ENST00000623056 TUBAL3A6NHL2 446 aa13.22□□□□□ -0.29
LDB3-209ENST00000623056 ZNF593O00488 134 aaPredicted RBP13.22□□□□□ -0.29
LDB3-209ENST00000623056 PLPP1O14494 284 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms