RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 SSX6Q7RTT6 188 aa7.46□□□□□ -1.21
VPS11-209ENST00000622309 LRRTM4Q86VH4 590 aa7.46□□□□□ -1.21
VPS11-209ENST00000622309 MARCH9Q86YJ5 346 aa7.46□□□□□ -1.21
VPS11-209ENST00000622309 THNSL2Q86YJ6 484 aa7.46□□□□□ -1.21
VPS11-209ENST00000622309 SIAH3Q8IW03 269 aa7.46□□□□□ -1.21
VPS11-209ENST00000622309 GPR135Q8IZ08 494 aa7.46□□□□□ -1.21
VPS11-209ENST00000622309 C11orf65Q8NCR3 313 aa7.46□□□□□ -1.21
VPS11-209ENST00000622309 DBF4BQ8NFT6 615 aa7.46□□□□□ -1.21
VPS11-209ENST00000622309 NEIL3Q8TAT5 605 aa7.46□□□□□ -1.21
VPS11-209ENST00000622309 HSD17B8Q92506 261 aa7.46□□□□□ -1.21
VPS11-209ENST00000622309 RNFT2Q96EX2 444 aa7.46□□□□□ -1.21
VPS11-209ENST00000622309 GINS4Q9BRT9 223 aa7.46□□□□□ -1.21
VPS11-209ENST00000622309 IFT27Q9BW83 186 aa7.46□□□□□ -1.21
VPS11-209ENST00000622309 SPATC1LQ9H0A9 340 aa7.46□□□□□ -1.21
VPS11-209ENST00000622309 SLC38A1Q9H2H9 487 aa7.46□□□□□ -1.21
VPS11-209ENST00000622309 TMPRSS5Q9H3S3 457 aa7.46□□□□□ -1.21
VPS11-209ENST00000622309 PIGMQ9H3S5 423 aa7.46□□□□□ -1.21
VPS11-209ENST00000622309 TMEM134Q9H6X4 195 aa7.46□□□□□ -1.21
VPS11-209ENST00000622309 TXNRD2Q9NNW7 524 aa7.46□□□□□ -1.21
VPS11-209ENST00000622309 TMEM184CQ9NVA4 438 aa7.46□□□□□ -1.21
VPS11-209ENST00000622309 NTMQ9P121 344 aa7.46□□□□□ -1.21
VPS11-209ENST00000622309 SIX4Q9UIU6 781 aa7.46□□□□□ -1.21
VPS11-209ENST00000622309 PCDHB7Q9Y5E2 793 aa7.46□□□□□ -1.21
VPS11-209ENST00000622309 PAPPA2Q9BXP8 1791 aa7.46□□□□□ -1.21
VPS11-209ENST00000622309 TLR4O00206 839 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 CCL22O00626 93 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 RGS14O43566 566 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 SEMG1P04279 462 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 ZNF14P17017 642 aaPredicted RBP7.46□□□□□ -1.22
VPS11-209ENST00000622309 FDXRP22570 491 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 DGKEP52429 567 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 ERVPABLB-1P60509 514 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 GMFBP60983 142 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 TRA2BP62995 288 aaKnown RBP7.46□□□□□ -1.22
VPS11-209ENST00000622309 SNTB2Q13425 540 aaKnown RBP7.46□□□□□ -1.22
VPS11-209ENST00000622309 SLC25A52Q3SY17 297 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 INTS6LQ5JSJ4 861 aaKnown RBP7.46□□□□□ -1.22
VPS11-209ENST00000622309 OR5M10Q6IEU7 315 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 RPL13AP3Q6NVV1 102 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 DEGS2Q6QHC5 323 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 UQCC3Q6UW78 93 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 QSOX2Q6ZRP7 698 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 UNC93AQ86WB7 457 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 C1orf127Q8N9H9 656 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 OR9Q2Q8NGE9 314 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 OR52B6Q8NGF0 335 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 SLC35F5Q8WV83 523 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 ACOT12Q8WYK0 555 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 PIGKQ92643 395 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 FAM83CQ9BQN1 747 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 INPP5KQ9BT40 448 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 TSSK6Q9BXA6 273 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 TMPRSS13Q9BYE2 586 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 TCF7L1Q9HCS4 588 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 METTL1Q9UBP6 276 aaKnown RBP7.46□□□□□ -1.22
VPS11-209ENST00000622309 FKBPLQ9UIM3 349 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 TRBV5-3A0A0A0MS03 114 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.46□□□□□ -1.22
VPS11-209ENST00000622309 FOXE1O00358 373 aaPredicted RBP7.46□□□□□ -1.22
VPS11-209ENST00000622309 CLDN4O14493 209 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 PRKYO43930 277 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 DPM1O60762 260 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 PRAF2O60831 178 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 AQP8O94778 261 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 WISP3O95389 354 aaPredicted RBP7.46□□□□□ -1.22
VPS11-209ENST00000622309 CD3GP09693 182 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 HOXB8P17481 243 aaPredicted RBP7.46□□□□□ -1.22
VPS11-209ENST00000622309 NPR2P20594 1047 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 CNR1P21554 472 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 PTPN6P29350 595 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 CSF2RBP32927 897 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 CD96P40200 585 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 TM4SF4P48230 202 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 RBP2P50120 134 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 AKR1C2P52895 323 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 CRISP1P54107 249 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 FABP5Q01469 135 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 TLE2Q04725 743 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 AKR1C1Q04828 323 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 IL10RBQ08334 325 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 LASP1Q14847 261 aaKnown RBP7.46□□□□□ -1.22
VPS11-209ENST00000622309 USF2Q15853 346 aaPredicted RBP7.46□□□□□ -1.22
VPS11-209ENST00000622309 TCEAL6Q6IPX3 200 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 ARMC6Q6NXE6 501 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 SLC27A1Q6PCB7 646 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 TMEM108Q6UXF1 575 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 CASP12Q6UXS9 341 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 LBX2Q6XYB7 198 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 LRRC28Q86X40 367 aaPredicted RBP7.46□□□□□ -1.22
VPS11-209ENST00000622309 ZBTB8OSQ8IWT0 167 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 TMEM192Q8IY95 271 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 NPWQ8N729 165 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 OR6B3Q8NGW1 331 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 GGACTQ9BVM4 153 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 POLDIP3Q9BY77 421 aaKnown RBP7.46□□□□□ -1.22
VPS11-209ENST00000622309 SMOC1Q9H4F8 434 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 WDR26Q9H7D7 661 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 ZSCAN32Q9NX65 697 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 GFOD1Q9NXC2 390 aa7.46□□□□□ -1.22
VPS11-209ENST00000622309 STOX2Q9P2F5 926 aaPredicted RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms