RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 TM9SF4Q92544 642 aa8.82□□□□□ -1
PDPN-212ENST00000621990 OSTF1Q92882 214 aa8.82□□□□□ -1
PDPN-212ENST00000621990 RNFT2Q96EX2 444 aa8.82□□□□□ -1
PDPN-212ENST00000621990 FAM46AQ96IP4 442 aaKnown RBP8.82□□□□□ -1
PDPN-212ENST00000621990 MSLNLQ96KJ4 702 aa8.82□□□□□ -1
PDPN-212ENST00000621990 WDR92Q96MX6 357 aa8.82□□□□□ -1
PDPN-212ENST00000621990 NELL2Q99435 816 aa8.82□□□□□ -1
PDPN-212ENST00000621990 JAM3Q9BX67 310 aa8.82□□□□□ -1
PDPN-212ENST00000621990 MCOLN1Q9GZU1 580 aa8.82□□□□□ -1
PDPN-212ENST00000621990 KLHL28Q9NXS3 571 aa8.82□□□□□ -1
PDPN-212ENST00000621990 CNIH4Q9P003 139 aa8.82□□□□□ -1
PDPN-212ENST00000621990 CAB39Q9Y376 341 aaPredicted RBP8.82□□□□□ -1
PDPN-212ENST00000621990 EXOSC1Q9Y3B2 195 aaKnown RBP8.82□□□□□ -1
PDPN-212ENST00000621990 ATG2BQ96BY7 2078 aa8.81□□□□□ -1
PDPN-212ENST00000621990 C10orf142B7Z368 130 aa8.81□□□□□ -1
PDPN-212ENST00000621990 TNFRSF10CO14798 259 aa8.81□□□□□ -1
PDPN-212ENST00000621990 SURF4O15260 269 aa8.81□□□□□ -1
PDPN-212ENST00000621990 P2RX6O15547 441 aa8.81□□□□□ -1
PDPN-212ENST00000621990 CTSVO60911 334 aa8.81□□□□□ -1
PDPN-212ENST00000621990 CCNYL3P0C7X3 344 aa8.81□□□□□ -1
PDPN-212ENST00000621990 MSL3P1P0C860 447 aa8.81□□□□□ -1
PDPN-212ENST00000621990 GAAP10253 952 aa8.81□□□□□ -1
PDPN-212ENST00000621990 HOXB2P14652 356 aa8.81□□□□□ -1
PDPN-212ENST00000621990 SPNP16150 400 aa8.81□□□□□ -1
PDPN-212ENST00000621990 AK4P27144 223 aaPredicted RBP8.81□□□□□ -1
PDPN-212ENST00000621990 IFNA8P32881 189 aa8.81□□□□□ -1
PDPN-212ENST00000621990 CLDN2P57739 230 aa8.81□□□□□ -1
PDPN-212ENST00000621990 DEFA1P59665 94 aa8.81□□□□□ -1
PDPN-212ENST00000621990 DEFA3P59666 94 aa8.81□□□□□ -1
PDPN-212ENST00000621990 EEF1A1P68104 462 aaKnown RBP8.81□□□□□ -1
PDPN-212ENST00000621990 DUSP8Q13202 625 aa8.81□□□□□ -1
PDPN-212ENST00000621990 LARS2Q15031 903 aaKnown RBP8.81□□□□□ -1
PDPN-212ENST00000621990 ZNF628Q5EBL2 1059 aa8.81□□□□□ -1
PDPN-212ENST00000621990 FCRL6Q6DN72 434 aa8.81□□□□□ -1
PDPN-212ENST00000621990 ENPP7Q6UWV6 458 aa8.81□□□□□ -1
PDPN-212ENST00000621990 GDPD3Q7L5L3 318 aa8.81□□□□□ -1
PDPN-212ENST00000621990 GDF7Q7Z4P5 450 aa8.81□□□□□ -1
PDPN-212ENST00000621990 OR4K14Q8NGD5 310 aa8.81□□□□□ -1
PDPN-212ENST00000621990 RSC1A1Q92681 617 aa8.81□□□□□ -1
PDPN-212ENST00000621990 HTRA1Q92743 480 aa8.81□□□□□ -1
PDPN-212ENST00000621990 CDS1Q92903 461 aa8.81□□□□□ -1
PDPN-212ENST00000621990 BMFQ96LC9 184 aa8.81□□□□□ -1
PDPN-212ENST00000621990 EXOSC4Q9NPD3 245 aaKnown RBP8.81□□□□□ -1
PDPN-212ENST00000621990 PAIP2BQ9ULR5 123 aaKnown RBP8.81□□□□□ -1
PDPN-212ENST00000621990 DAPP1Q9UN19 280 aa8.81□□□□□ -1
PDPN-212ENST00000621990 SLC22A7Q9Y694 548 aa8.81□□□□□ -1
PDPN-212ENST00000621990 LIMS3P0CW19 117 aa8.81□□□□□ -1
PDPN-212ENST00000621990 LIMS4P0CW20 117 aa8.81□□□□□ -1
PDPN-212ENST00000621990 UGT2B7P16662 529 aa8.81□□□□□ -1
PDPN-212ENST00000621990 CPN2P22792 545 aa8.81□□□□□ -1
PDPN-212ENST00000621990 FGF9P31371 208 aaPredicted RBP8.81□□□□□ -1
PDPN-212ENST00000621990 AVPR1BP47901 424 aa8.81□□□□□ -1
PDPN-212ENST00000621990 EIF2B2P49770 351 aaKnown RBP8.81□□□□□ -1
PDPN-212ENST00000621990 RUNX2Q13950 521 aa8.81□□□□□ -1
PDPN-212ENST00000621990 ZNF620Q6ZNG0 422 aa8.81□□□□□ -1
PDPN-212ENST00000621990 QSOX2Q6ZRP7 698 aa8.81□□□□□ -1
PDPN-212ENST00000621990 DGLUCYQ7Z3D6 616 aa8.81□□□□□ -1
PDPN-212ENST00000621990 NKAIN4Q8IVV8 208 aa8.81□□□□□ -1
PDPN-212ENST00000621990 OR4Q3Q8NH05 313 aa8.81□□□□□ -1
PDPN-212ENST00000621990 ZFPM2Q8WW38 1151 aa8.81□□□□□ -1
PDPN-212ENST00000621990 SLC9A6Q92581 669 aa8.81□□□□□ -1
PDPN-212ENST00000621990 HPS1Q92902 700 aa8.81□□□□□ -1
PDPN-212ENST00000621990 SLC41A3Q96GZ6 507 aa8.81□□□□□ -1
PDPN-212ENST00000621990 ARHGAP9Q9BRR9 750 aa8.81□□□□□ -1
PDPN-212ENST00000621990 ZNF649Q9BS31 505 aa8.81□□□□□ -1
PDPN-212ENST00000621990 ZNF350Q9GZX5 532 aa8.81□□□□□ -1
PDPN-212ENST00000621990 S1PR5Q9H228 398 aa8.81□□□□□ -1
PDPN-212ENST00000621990 LYRM4Q9HD34 91 aa8.81□□□□□ -1
PDPN-212ENST00000621990 CARD8Q9Y2G2 431 aa8.81□□□□□ -1
PDPN-212ENST00000621990 URADA6NGE7 173 aa8.8□□□□□ -1
PDPN-212ENST00000621990 H3BQ06 376 aaPredicted RBP8.8□□□□□ -1
PDPN-212ENST00000621990 AP3D1O14617 1153 aa8.8□□□□□ -1
PDPN-212ENST00000621990 KLF8O95600 359 aaPredicted RBP8.8□□□□□ -1
PDPN-212ENST00000621990 NTN1O95631 604 aa8.8□□□□□ -1
PDPN-212ENST00000621990 EGFP01133 1207 aa8.8□□□□□ -1
PDPN-212ENST00000621990 IGHA1P01876 353 aa8.8□□□□□ -1
PDPN-212ENST00000621990 ATP1B1P05026 303 aa8.8□□□□□ -1
PDPN-212ENST00000621990 MAGP20916 626 aa8.8□□□□□ -1
PDPN-212ENST00000621990 GABRA5P31644 462 aa8.8□□□□□ -1
PDPN-212ENST00000621990 ZNF136P52737 540 aa8.8□□□□□ -1
PDPN-212ENST00000621990 RGS8P57771 180 aaPredicted RBP8.8□□□□□ -1
PDPN-212ENST00000621990 ACSM1Q08AH1 577 aa8.8□□□□□ -1
PDPN-212ENST00000621990 SELENBP1Q13228 472 aa8.8□□□□□ -1
PDPN-212ENST00000621990 DUSP5Q16690 384 aa8.8□□□□□ -1
PDPN-212ENST00000621990 DESI1Q6ICB0 168 aa8.8□□□□□ -1
PDPN-212ENST00000621990 ZNF836Q6ZNA1 936 aa8.8□□□□□ -1
PDPN-212ENST00000621990 LAPTM4BQ86VI4 370 aa8.8□□□□□ -1
PDPN-212ENST00000621990 MEX3DQ86XN8 651 aaKnown RBP8.8□□□□□ -1
PDPN-212ENST00000621990 CCL4L1Q8NHW4 92 aa8.8□□□□□ -1
PDPN-212ENST00000621990 RFKQ969G6 155 aa8.8□□□□□ -1
PDPN-212ENST00000621990 MRPL38Q96DV4 380 aaKnown RBP8.8□□□□□ -1
PDPN-212ENST00000621990 RIPOR3Q96MK2 946 aa8.8□□□□□ -1
PDPN-212ENST00000621990 NLGN3Q9NZ94 848 aa8.8□□□□□ -1
PDPN-212ENST00000621990 TBC1D24Q9ULP9 559 aa8.8□□□□□ -1
PDPN-212ENST00000621990 C19orf53Q9UNZ5 99 aaPredicted RBP8.8□□□□□ -1
PDPN-212ENST00000621990 SATB2Q9UPW6 733 aa8.8□□□□□ -1
PDPN-212ENST00000621990 EXOGQ9Y2C4 368 aaKnown RBP8.8□□□□□ -1
PDPN-212ENST00000621990 GPR52Q9Y2T5 361 aa8.8□□□□□ -1
PDPN-212ENST00000621990 FANCMQ8IYD8 2048 aa8.8□□□□□ -1
PDPN-212ENST00000621990 A0A087WV62 115 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms