RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 OR51I1Q9H343 314 aa17.05■□□□□ 0.32
CIRBP-245ENST00000621399 SERHL2Q9H4I8 314 aa17.05■□□□□ 0.32
CIRBP-245ENST00000621399 SLC6A13Q9NSD5 602 aa17.05■□□□□ 0.32
CIRBP-245ENST00000621399 NDUFAF1Q9Y375 327 aa17.05■□□□□ 0.32
CIRBP-245ENST00000621399 FLNBO75369 2602 aaKnown RBP17.05■□□□□ 0.32
CIRBP-245ENST00000621399 ZNF462Q96JM2 2506 aa17.04■□□□□ 0.32
CIRBP-245ENST00000621399 A0A096LPI6 279 aa17.04■□□□□ 0.32
CIRBP-245ENST00000621399 PINLYPA6NC86 204 aa17.04■□□□□ 0.32
CIRBP-245ENST00000621399 ANGPT2O15123 496 aa17.04■□□□□ 0.32
CIRBP-245ENST00000621399 CCDC22O60826 627 aa17.04■□□□□ 0.32
CIRBP-245ENST00000621399 SNX4O95219 450 aa17.04■□□□□ 0.32
CIRBP-245ENST00000621399 KRT75O95678 551 aa17.04■□□□□ 0.32
CIRBP-245ENST00000621399 IGKV1D-16P01601 117 aa17.04■□□□□ 0.32
CIRBP-245ENST00000621399 C1QCP02747 245 aa17.04■□□□□ 0.32
CIRBP-245ENST00000621399 CYP4B1P13584 511 aa17.04■□□□□ 0.32
CIRBP-245ENST00000621399 RFC3P40938 356 aa17.04■□□□□ 0.32
CIRBP-245ENST00000621399 PLGLB1Q02325 96 aa17.04■□□□□ 0.32
CIRBP-245ENST00000621399 KLF10Q13118 480 aa17.04■□□□□ 0.32
CIRBP-245ENST00000621399 GTDC1Q4AE62 458 aa17.04■□□□□ 0.32
CIRBP-245ENST00000621399 PAGE3Q5JUK9 113 aa17.04■□□□□ 0.32
CIRBP-245ENST00000621399 CCNJQ5T5M9 372 aa17.04■□□□□ 0.32
CIRBP-245ENST00000621399 TNFAIP8L2Q6P589 184 aaPredicted RBP17.04■□□□□ 0.32
CIRBP-245ENST00000621399 GALNT10Q86SR1 603 aa17.04■□□□□ 0.32
CIRBP-245ENST00000621399 RNF130Q86XS8 419 aa17.04■□□□□ 0.32
CIRBP-245ENST00000621399 ZFP62Q8NB50 900 aaPredicted RBP17.04■□□□□ 0.32
CIRBP-245ENST00000621399 FAM110BQ8TC76 370 aa17.04■□□□□ 0.32
CIRBP-245ENST00000621399 MIPOL1Q8TD10 442 aa17.04■□□□□ 0.32
CIRBP-245ENST00000621399 TSPEARQ8WU66 669 aa17.04■□□□□ 0.32
CIRBP-245ENST00000621399 PHF12Q96QT6 1004 aa17.04■□□□□ 0.32
CIRBP-245ENST00000621399 G6PC3Q9BUM1 346 aa17.04■□□□□ 0.32
CIRBP-245ENST00000621399 ANGPTL4Q9BY76 406 aa17.04■□□□□ 0.32
CIRBP-245ENST00000621399 NMUR2Q9GZQ4 415 aa17.04■□□□□ 0.32
CIRBP-245ENST00000621399 PAIP1Q9H074 479 aaKnown RBP17.04■□□□□ 0.32
CIRBP-245ENST00000621399 PROK2Q9HC23 129 aa17.04■□□□□ 0.32
CIRBP-245ENST00000621399 OLAHQ9NV23 265 aa17.04■□□□□ 0.32
CIRBP-245ENST00000621399 KLRF1Q9NZS2 232 aa17.04■□□□□ 0.32
CIRBP-245ENST00000621399 LEF1Q9UJU2 399 aaPredicted RBP17.04■□□□□ 0.32
CIRBP-245ENST00000621399 KCNE3Q9Y6H6 103 aa17.04■□□□□ 0.32
CIRBP-245ENST00000621399 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.04■□□□□ 0.32
CIRBP-245ENST00000621399 PRAMEF25A6NGN4 478 aa17.03■□□□□ 0.32
CIRBP-245ENST00000621399 AGR2O95994 175 aa17.03■□□□□ 0.32
CIRBP-245ENST00000621399 ZNF24P17028 368 aa17.03■□□□□ 0.32
CIRBP-245ENST00000621399 KHKP50053 298 aa17.03■□□□□ 0.32
CIRBP-245ENST00000621399 ALDH6A1Q02252 535 aaKnown RBP17.03■□□□□ 0.32
CIRBP-245ENST00000621399 SLC30A6Q6NXT4 461 aa17.03■□□□□ 0.32
CIRBP-245ENST00000621399 PACS2Q86VP3 889 aa17.03■□□□□ 0.32
CIRBP-245ENST00000621399 PNPT1Q8TCS8 783 aaKnown RBP17.03■□□□□ 0.32
CIRBP-245ENST00000621399 ZFP90Q8TF47 636 aa17.03■□□□□ 0.32
CIRBP-245ENST00000621399 JSRP1Q96MG2 331 aaPredicted RBP17.03■□□□□ 0.32
CIRBP-245ENST00000621399 BARD1Q99728 777 aaKnown RBP17.03■□□□□ 0.32
CIRBP-245ENST00000621399 EXD2Q9NVH0 621 aa17.03■□□□□ 0.32
CIRBP-245ENST00000621399 TUBA8Q9NY65 449 aaPredicted RBP17.03■□□□□ 0.32
CIRBP-245ENST00000621399 ARMCX1Q9P291 453 aa17.03■□□□□ 0.32
CIRBP-245ENST00000621399 BOKQ9UMX3 212 aaPredicted RBP17.03■□□□□ 0.32
CIRBP-245ENST00000621399 PCDHB14Q9Y5E9 798 aa17.03■□□□□ 0.32
CIRBP-245ENST00000621399 ICOSLGO75144 302 aa17.02■□□□□ 0.32
CIRBP-245ENST00000621399 UTS2O95399 124 aa17.02■□□□□ 0.32
CIRBP-245ENST00000621399 OR12D1P0DN82 309 aa17.02■□□□□ 0.32
CIRBP-245ENST00000621399 ATP6V1C1P21283 382 aa17.02■□□□□ 0.32
CIRBP-245ENST00000621399 PTPN6P29350 595 aa17.02■□□□□ 0.32
CIRBP-245ENST00000621399 ADSLP30566 484 aaPredicted RBP17.02■□□□□ 0.32
CIRBP-245ENST00000621399 ANXA11P50995 505 aaKnown RBP17.02■□□□□ 0.32
CIRBP-245ENST00000621399 SNTA1Q13424 505 aa17.02■□□□□ 0.32
CIRBP-245ENST00000621399 MAPRE2Q15555 327 aa17.02■□□□□ 0.32
CIRBP-245ENST00000621399 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.02■□□□□ 0.32
CIRBP-245ENST00000621399 RNFT1Q5M7Z0 435 aa17.02■□□□□ 0.32
CIRBP-245ENST00000621399 DCST2Q5T1A1 773 aa17.02■□□□□ 0.32
CIRBP-245ENST00000621399 ATAD3BQ5T9A4 648 aa17.02■□□□□ 0.32
CIRBP-245ENST00000621399 TMEM81Q6P7N7 255 aa17.02■□□□□ 0.32
CIRBP-245ENST00000621399 MTDHQ86UE4 582 aaKnown RBP17.02■□□□□ 0.32
CIRBP-245ENST00000621399 XAGE5Q8WWM1 108 aa17.02■□□□□ 0.32
CIRBP-245ENST00000621399 NR4A3Q92570 626 aa17.02■□□□□ 0.32
CIRBP-245ENST00000621399 RAB8BQ92930 207 aa17.02■□□□□ 0.32
CIRBP-245ENST00000621399 AURKBQ96GD4 344 aaPredicted RBP17.02■□□□□ 0.32
CIRBP-245ENST00000621399 OSBPL11Q9BXB4 747 aa17.02■□□□□ 0.32
CIRBP-245ENST00000621399 TPT1P8Q9HAU6 139 aa17.02■□□□□ 0.32
CIRBP-245ENST00000621399 IL1RL2Q9HB29 575 aa17.02■□□□□ 0.32
CIRBP-245ENST00000621399 FBXO34Q9NWN3 711 aa17.02■□□□□ 0.32
CIRBP-245ENST00000621399 SLAMF8Q9P0V8 285 aa17.02■□□□□ 0.32
CIRBP-245ENST00000621399 ADAM21Q9UKJ8 722 aa17.02■□□□□ 0.32
CIRBP-245ENST00000621399 CAPN7Q9Y6W3 813 aa17.02■□□□□ 0.32
CIRBP-245ENST00000621399 C2orf72A6NCS6 295 aa17.01■□□□□ 0.31
CIRBP-245ENST00000621399 FAM166BA8MTA8 275 aa17.01■□□□□ 0.31
CIRBP-245ENST00000621399 ACOT7O00154 380 aa17.01■□□□□ 0.31
CIRBP-245ENST00000621399 TFECO14948 347 aaPredicted RBP17.01■□□□□ 0.31
CIRBP-245ENST00000621399 SLC22A2O15244 555 aa17.01■□□□□ 0.31
CIRBP-245ENST00000621399 ASNA1O43681 348 aa17.01■□□□□ 0.31
CIRBP-245ENST00000621399 TRIM3O75382 744 aaPredicted RBP17.01■□□□□ 0.31
CIRBP-245ENST00000621399 MST1P26927 711 aa17.01■□□□□ 0.31
CIRBP-245ENST00000621399 MASP1P48740 699 aa17.01■□□□□ 0.31
CIRBP-245ENST00000621399 CLK3P49761 638 aaKnown RBP17.01■□□□□ 0.31
CIRBP-245ENST00000621399 PPIAP62937 165 aaKnown RBP17.01■□□□□ 0.31
CIRBP-245ENST00000621399 TXNL4AP83876 142 aaKnown RBP17.01■□□□□ 0.31
CIRBP-245ENST00000621399 FOXO1Q12778 655 aa17.01■□□□□ 0.31
CIRBP-245ENST00000621399 IGFBP7Q16270 282 aa17.01■□□□□ 0.31
CIRBP-245ENST00000621399 LRIF1Q5T3J3 769 aa17.01■□□□□ 0.31
CIRBP-245ENST00000621399 ZNF324BQ6AW86 544 aaPredicted RBP17.01■□□□□ 0.31
CIRBP-245ENST00000621399 C16orf62Q7Z3J2 963 aa17.01■□□□□ 0.31
CIRBP-245ENST00000621399 PIGWQ7Z7B1 504 aa17.01■□□□□ 0.31
CIRBP-245ENST00000621399 MIB2Q96AX9 1013 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms