RNA–Protein interactions for RNA: ENST00000620916.2

MATR3-228, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 3,134 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-228ENST00000620916 RHOT1Q8IXI2 618 aa4.81□□□□□ -1.64
MATR3-228ENST00000620916 ZC3H3Q8IXZ2 948 aaKnown RBP4.81□□□□□ -1.64
MATR3-228ENST00000620916 PUSL1Q8N0Z8 303 aaKnown RBP4.81□□□□□ -1.64
MATR3-228ENST00000620916 AQP11Q8NBQ7 271 aa4.81□□□□□ -1.64
MATR3-228ENST00000620916 ZSCAN18Q8TBC5 510 aaPredicted RBP4.81□□□□□ -1.64
MATR3-228ENST00000620916 SMIM8Q96KF7 97 aa4.81□□□□□ -1.64
MATR3-228ENST00000620916 FAM84AQ96KN4 292 aa4.81□□□□□ -1.64
MATR3-228ENST00000620916 PTCHD1Q96NR3 888 aa4.81□□□□□ -1.64
MATR3-228ENST00000620916 TAAR9Q96RI9 348 aa4.81□□□□□ -1.64
MATR3-228ENST00000620916 SYT11Q9BT88 431 aa4.81□□□□□ -1.64
MATR3-228ENST00000620916 MECRQ9BV79 373 aa4.81□□□□□ -1.64
MATR3-228ENST00000620916 ANGPTL4Q9BY76 406 aa4.81□□□□□ -1.64
MATR3-228ENST00000620916 DZANK1Q9NVP4 752 aa4.81□□□□□ -1.64
MATR3-228ENST00000620916 CLEC5AQ9NY25 188 aa4.81□□□□□ -1.64
MATR3-228ENST00000620916 GCNT4Q9P109 453 aa4.81□□□□□ -1.64
MATR3-228ENST00000620916 TRPC4Q9UBN4 977 aa4.81□□□□□ -1.64
MATR3-228ENST00000620916 TBC1D29Q9UFV1 150 aa4.81□□□□□ -1.64
MATR3-228ENST00000620916 INSL6Q9Y581 213 aa4.81□□□□□ -1.64
MATR3-228ENST00000620916 MEIKINA0A087WXM9 373 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 TMEM72A0PK05 275 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 FABP12A6NFH5 140 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 FIGNL2A6NMB9 653 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 C9orf172C9J069 976 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 M0R143 59 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 ANKRD28O15084 1053 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 PMM2O15305 246 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 CHADO15335 359 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 SLC16A3O15427 465 aaKnown RBP4.8□□□□□ -1.64
MATR3-228ENST00000620916 DCXO43602 365 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 RPLP1P05386 114 aaKnown RBP4.8□□□□□ -1.64
MATR3-228ENST00000620916 HLA-DOAP06340 250 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 BMP7P18075 431 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 STOMP27105 288 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 TNFSF8P32971 234 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 MAP2K4P45985 399 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 CDK8P49336 464 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 METAP2P50579 478 aaKnown RBP eCLIP4.8□□□□□ -1.64
MATR3-228ENST00000620916 ACLYP53396 1101 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 EMP2P54851 167 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 DYNLL1P63167 89 aaKnown RBP4.8□□□□□ -1.64
MATR3-228ENST00000620916 INSM1Q01101 510 aaPredicted RBP4.8□□□□□ -1.64
MATR3-228ENST00000620916 NRG1Q02297 640 aaPredicted RBP4.8□□□□□ -1.64
MATR3-228ENST00000620916 PSG3Q16557 428 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 PCID2Q5JVF3 399 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 LAIR2Q6ISS4 152 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 TMEM71Q6P5X7 295 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 FAM89BQ8N5H3 189 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 MRPL43Q8N983 215 aaKnown RBP4.8□□□□□ -1.64
MATR3-228ENST00000620916 ANKRD52Q8NB46 1076 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 ACOT12Q8WYK0 555 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 DPF1Q92782 380 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 EDAQ92838 391 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 SLC35C1Q96A29 364 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 SPATA13Q96N96 652 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 RBBP8Q99708 897 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 MXRA8Q9BRK3 442 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 DDA1Q9BW61 102 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 ITPAQ9BY32 194 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 MAGEB5Q9BZ81 275 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 NRSN2Q9GZP1 204 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 SMOC2Q9H3U7 446 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 KRCC1Q9NPI7 259 aaPredicted RBP4.8□□□□□ -1.64
MATR3-228ENST00000620916 PAK5Q9P286 719 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 STOX2Q9P2F5 926 aaPredicted RBP4.8□□□□□ -1.64
MATR3-228ENST00000620916 SLC25A13Q9UJS0 675 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 SLC5A6Q9Y289 635 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 TPRKBQ9Y3C4 175 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 OR51B4Q9Y5P0 310 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 ALG6Q9Y672 507 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 DCDC2BA2VCK2 349 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 FAM171A2A8MVW0 826 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 SMLR1H3BR10 107 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 NKRFO15226 690 aaKnown RBP eCLIP4.8□□□□□ -1.64
MATR3-228ENST00000620916 PLA2G10O15496 165 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 AIREO43918 545 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 DOK2O60496 412 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 AQP8O94778 261 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 PNPP00491 289 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 CALCAP01258 141 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 IGF2P01344 180 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 F11P03951 625 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 SERPINE1P05121 402 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 RPLP0P05388 317 aaKnown RBP4.8□□□□□ -1.64
MATR3-228ENST00000620916 C8GP07360 202 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 CSF3P09919 207 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 BCKDHBP21953 392 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 ABCD3P28288 659 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 PRDX5P30044 214 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 CTSKP43235 329 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 KLF3P57682 345 aaPredicted RBP4.8□□□□□ -1.64
MATR3-228ENST00000620916 RPS20P60866 119 aaKnown RBP4.8□□□□□ -1.64
MATR3-228ENST00000620916 SLC35A2P78381 396 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.8□□□□□ -1.64
MATR3-228ENST00000620916 SLAQ13239 276 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 SCGB2A2Q13296 93 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 MADCAM1Q13477 382 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 CAMK2GQ13555 558 aaPredicted RBP4.8□□□□□ -1.64
MATR3-228ENST00000620916 SEMA5AQ13591 1074 aa4.8□□□□□ -1.64
MATR3-228ENST00000620916 TRA2AQ13595 282 aaKnown RBP eCLIP4.8□□□□□ -1.643e-14■■■□□ 18.7
MATR3-228ENST00000620916 MBLAC2Q68D91 279 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms