RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 LHCGRP22888 699 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 ZP2Q05996 745 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 ARHGAP19Q14CB8 494 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 EXOSC7Q15024 291 aaKnown RBP10.75□□□□□ -0.69
CLIP1-219ENST00000620786 RGNQ15493 299 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 TUBA3EQ6PEY2 450 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 ZNF773Q6PK81 442 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 SPPL3Q8TCT6 385 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 ZNF285Q96NJ3 590 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 DYNLRB1Q9NP97 96 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 POT1Q9NUX5 634 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 DNAJC15Q9Y5T4 150 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 CCRL2O00421 344 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 MMP2P08253 660 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 MAGEA12P43365 314 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 OR1D4P47884 311 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 PRLHRP49683 370 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 RAB41Q5JT25 222 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 LETMD1Q6P1Q0 360 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 IL20RBQ6UXL0 311 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 SHFQ7M4L6 423 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 TMEM173Q86WV6 379 aaPredicted RBP10.75□□□□□ -0.69
CLIP1-219ENST00000620786 SCGB1C1Q8TD33 95 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 METTL2AQ96IZ6 378 aaKnown RBP10.75□□□□□ -0.69
CLIP1-219ENST00000620786 LRR1Q96L50 414 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 DPH1Q9BZG8 443 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 ENKD1Q9H0I2 346 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 SYT7O43581 403 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 C1orf105O95561 183 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 STOMP27105 288 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 MAP2K4P45985 399 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 ZNF789Q5FWF6 425 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 DCDC5Q6ZRR9 648 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 C19orf47Q8N9M1 422 aaKnown RBP10.75□□□□□ -0.69
CLIP1-219ENST00000620786 CRYGNQ8WXF5 182 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 PTERQ96BW5 349 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 SLC30A2Q9BRI3 323 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 CSNK1G1Q9HCP0 422 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 MKS1Q9NXB0 559 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 ETAA1Q9NY74 926 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 ABRACLQ9P1F3 81 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 EXTL2Q9UBQ6 330 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 IL20RAQ9UHF4 553 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 ITGB1BP2Q9UKP3 347 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 PCDHA9Q9Y5H5 950 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 KAT6AQ92794 2004 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 ANKRD30BLA7E2S9 258 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 HPRP00739 348 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 IL32P24001 234 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 UGT2B10P36537 528 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 AKR1D1P51857 326 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 NADK2Q4G0N4 442 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 PGM2L1Q6PCE3 622 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 OR9A4Q8NGU2 314 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 SNIP1Q8TAD8 396 aaKnown RBP10.75□□□□□ -0.69
CLIP1-219ENST00000620786 DNAJB11Q9UBS4 358 aa10.75□□□□□ -0.69
CLIP1-219ENST00000620786 H7C417 338 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 GJB3O75712 270 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 ACTL6BO94805 426 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 HTR3BO95264 441 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 CLIC3O95833 236 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 GKN3PP0CG01 181 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 ITGB8P26012 769 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 CRABP1P29762 137 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 RAB11BQ15907 218 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 CNPY1Q3B7I2 92 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 NADSYN1Q6IA69 706 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 PDSS2Q86YH6 399 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 TEX26Q8N6G2 289 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 NXPE3Q969Y0 559 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 RDH12Q96NR8 316 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 ZNF317Q96PQ6 595 aaPredicted RBP10.74□□□□□ -0.69
CLIP1-219ENST00000620786 INSM2Q96T92 566 aaPredicted RBP10.74□□□□□ -0.69
CLIP1-219ENST00000620786 PAPOLGQ9BWT3 736 aaKnown RBP10.74□□□□□ -0.69
CLIP1-219ENST00000620786 TMEM168Q9H0V1 697 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 LHX3Q9UBR4 397 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 ZCWPW2A0A1B0GU75 182 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 A0A1W2PPW3 197 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 FAM171A2A8MVW0 826 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 HTRA2O43464 458 aaPredicted RBP10.74□□□□□ -0.69
CLIP1-219ENST00000620786 LPLP06858 475 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 ICAM2P13598 275 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 SLC2A5P22732 501 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 S100A1P23297 94 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 IDUAP35475 653 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 CDKN2CP42773 168 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 HTR3AP46098 478 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 CSNK1A1P48729 337 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 CYS1Q717R9 158 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 SLC35F2Q8IXU6 374 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 KDM1BQ8NB78 822 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 SLC37A3Q8NCC5 494 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 UTP23Q9BRU9 249 aaKnown RBP10.74□□□□□ -0.69
CLIP1-219ENST00000620786 CBLCQ9ULV8 474 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 SLC35A3Q9Y2D2 325 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 F5H5K5 113 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 TSPAN9O75954 239 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 RASAL1O95294 804 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 ZNF12P17014 697 aa10.74□□□□□ -0.69
CLIP1-219ENST00000620786 TCN2P20062 427 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms