RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 PACSIN3Q9UKS6 424 aa12.54□□□□□ -0.4
NEK3-210ENST00000620675 HRH3Q9Y5N1 445 aa12.54□□□□□ -0.4
NEK3-210ENST00000620675 ACOX3O15254 700 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 TNFRSF21O75509 655 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 PPM1BO75688 479 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 KRT75O95678 551 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 CYB561P49447 251 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 TNFSF10P50591 281 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 SLC25A3Q00325 362 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 ADRM1Q16186 407 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 NTRK2Q16620 822 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 PRAMEF20Q5VT98 475 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 C8orf82Q6P1X6 216 aaPredicted RBP12.53□□□□□ -0.4
NEK3-210ENST00000620675 IGFL3Q6UXB1 125 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 TAGAPQ8N103 731 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 ANKFN1Q8N957 763 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 ZG16BQ96DA0 208 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 RUBCNLQ9H714 662 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 DEPPQ9NTK1 212 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 HPF1Q9NWY4 346 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 CMTM6Q9NX76 183 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 CHCHD2Q9Y6H1 151 aaPredicted RBP12.53□□□□□ -0.4
NEK3-210ENST00000620675 GTF3C1Q12789 2109 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 C2orf72A6NCS6 295 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 CCT8L1PA6NM43 557 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 ERVH48-1M5A8F1 160 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 CYP4B1P13584 511 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 KHKP50053 298 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 NRG3P56975 720 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 GPR85P60893 370 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 POU6F2P78424 691 aaPredicted RBP12.53□□□□□ -0.4
NEK3-210ENST00000620675 LACTB2Q53H82 288 aaPredicted RBP12.53□□□□□ -0.4
NEK3-210ENST00000620675 DCST2Q5T1A1 773 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 HEPHL1Q6MZM0 1159 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 OPN5Q6U736 354 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 APOOLQ6UXV4 268 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 LSRQ86X29 649 aaPredicted RBP12.53□□□□□ -0.4
NEK3-210ENST00000620675 PTRH1Q86Y79 214 aaKnown RBP12.53□□□□□ -0.4
NEK3-210ENST00000620675 PCYOX1LQ8NBM8 494 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 OR10A6Q8NH74 314 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 FAM110BQ8TC76 370 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 DIO2Q92813 273 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 HGDQ93099 445 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 TMEM125Q96AQ2 219 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 SDF2Q99470 211 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 THUMPD3Q9BV44 507 aaKnown RBP12.53□□□□□ -0.4
NEK3-210ENST00000620675 BTBD2Q9BX70 525 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.53□□□□□ -0.4
NEK3-210ENST00000620675 QRSL1Q9H0R6 528 aaKnown RBP12.53□□□□□ -0.4
NEK3-210ENST00000620675 TRIM45Q9H8W5 580 aaPredicted RBP12.53□□□□□ -0.4
NEK3-210ENST00000620675 EFCAB1Q9HAE3 211 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 PROK2Q9HC23 129 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 SH2D2AQ9NP31 389 aa12.53□□□□□ -0.4
NEK3-210ENST00000620675 SHANK1Q9Y566 2161 aa12.52□□□□□ -0.4
NEK3-210ENST00000620675 B4DXG7 233 aa12.52□□□□□ -0.4
NEK3-210ENST00000620675 ADAM10O14672 748 aa12.52□□□□□ -0.4
NEK3-210ENST00000620675 ICOSLGO75144 302 aa12.52□□□□□ -0.4
NEK3-210ENST00000620675 SLC25A12O75746 678 aa12.52□□□□□ -0.4
NEK3-210ENST00000620675 CHRM4P08173 479 aa12.52□□□□□ -0.4
NEK3-210ENST00000620675 GPX2P18283 190 aa12.52□□□□□ -0.4
NEK3-210ENST00000620675 GZMMP51124 257 aa12.52□□□□□ -0.4
NEK3-210ENST00000620675 DSTNP60981 165 aa12.52□□□□□ -0.4
NEK3-210ENST00000620675 INPP5JQ15735 1006 aaPredicted RBP12.52□□□□□ -0.4
NEK3-210ENST00000620675 CYP27C1Q4G0S4 372 aa12.52□□□□□ -0.4
NEK3-210ENST00000620675 RPS26P11Q5JNZ5 115 aaPredicted RBP12.52□□□□□ -0.4
NEK3-210ENST00000620675 C6orf89Q6UWU4 347 aa12.52□□□□□ -0.4
NEK3-210ENST00000620675 RINLQ6ZS11 566 aa12.52□□□□□ -0.4
NEK3-210ENST00000620675 PTOV1Q86YD1 416 aa12.52□□□□□ -0.4
NEK3-210ENST00000620675 SLC15A4Q8N697 577 aa12.52□□□□□ -0.4
NEK3-210ENST00000620675 OR4C3Q8NH37 302 aa12.52□□□□□ -0.4
NEK3-210ENST00000620675 NSL1Q96IY1 281 aa12.52□□□□□ -0.4
NEK3-210ENST00000620675 RSPO3Q9BXY4 272 aaPredicted RBP12.52□□□□□ -0.4
NEK3-210ENST00000620675 RNF32Q9H0A6 362 aa12.52□□□□□ -0.4
NEK3-210ENST00000620675 KAT8Q9H7Z6 458 aaKnown RBP12.52□□□□□ -0.4
NEK3-210ENST00000620675 GALNT9Q9HCQ5 603 aa12.52□□□□□ -0.4
NEK3-210ENST00000620675 KCNE5Q9UJ90 142 aa12.52□□□□□ -0.4
NEK3-210ENST00000620675 MKLN1Q9UL63 735 aa12.52□□□□□ -0.4
NEK3-210ENST00000620675 ZNF451Q9Y4E5 1061 aa12.52□□□□□ -0.4
NEK3-210ENST00000620675 PINLYPA6NC86 204 aa12.52□□□□□ -0.41
NEK3-210ENST00000620675 NME4O00746 187 aa12.52□□□□□ -0.41
NEK3-210ENST00000620675 IL33O95760 270 aa12.52□□□□□ -0.41
NEK3-210ENST00000620675 ESRRAP11474 423 aaPredicted RBP12.52□□□□□ -0.41
NEK3-210ENST00000620675 CPOXP36551 454 aa12.52□□□□□ -0.41
NEK3-210ENST00000620675 SLC7A2P52569 658 aa12.52□□□□□ -0.41
NEK3-210ENST00000620675 ART3Q13508 389 aa12.52□□□□□ -0.41
NEK3-210ENST00000620675 DECR1Q16698 335 aa12.52□□□□□ -0.41
NEK3-210ENST00000620675 PLEKHN1Q494U1 663 aaPredicted RBP12.52□□□□□ -0.41
NEK3-210ENST00000620675 SLC15A3Q8IY34 581 aa12.52□□□□□ -0.41
NEK3-210ENST00000620675 ZADH2Q8N4Q0 377 aa12.52□□□□□ -0.41
NEK3-210ENST00000620675 RBM15BQ8NDT2 890 aaKnown RBP12.52□□□□□ -0.41
NEK3-210ENST00000620675 PSD4Q8NDX1 1056 aa12.52□□□□□ -0.41
NEK3-210ENST00000620675 GRHL3Q8TE85 626 aa12.52□□□□□ -0.41
NEK3-210ENST00000620675 SLC38A5Q8WUX1 472 aa12.52□□□□□ -0.41
NEK3-210ENST00000620675 ROPN1LQ96C74 230 aa12.52□□□□□ -0.41
NEK3-210ENST00000620675 COL21A1Q96P44 957 aa12.52□□□□□ -0.41
NEK3-210ENST00000620675 ADNPQ9H2P0 1102 aa12.52□□□□□ -0.41
NEK3-210ENST00000620675 ABI3Q9P2A4 366 aa12.52□□□□□ -0.41
NEK3-210ENST00000620675 GMEB1Q9Y692 573 aa12.52□□□□□ -0.41
NEK3-210ENST00000620675 MPDZO75970 2070 aa12.51□□□□□ -0.41
NEK3-210ENST00000620675 OR6C70A6NIJ9 312 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms