RNA–Protein interactions for RNA: ENST00000620292.4

CBWD1-229, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-229ENST00000620292 GUCY2DQ02846 1103 aa3.12□□□□□ -1.91
CBWD1-229ENST00000620292 RBPJQ06330 500 aa3.12□□□□□ -1.91
CBWD1-229ENST00000620292 CNTN1Q12860 1018 aa3.12□□□□□ -1.91
CBWD1-229ENST00000620292 C1orf61Q13536 156 aa3.12□□□□□ -1.91
CBWD1-229ENST00000620292 RASA2Q15283 850 aa3.12□□□□□ -1.91
CBWD1-229ENST00000620292 HNRNPA1L2Q32P51 320 aaKnown RBP3.12□□□□□ -1.91
CBWD1-229ENST00000620292 FAM133BQ5BKY9 247 aaKnown RBP3.12□□□□□ -1.91
CBWD1-229ENST00000620292 WLSQ5T9L3 541 aa3.12□□□□□ -1.91
CBWD1-229ENST00000620292 FHL5Q5TD97 284 aa3.12□□□□□ -1.91
CBWD1-229ENST00000620292 CST9LP1Q5W188 147 aa3.12□□□□□ -1.91
CBWD1-229ENST00000620292 KCTD16Q68DU8 428 aa3.12□□□□□ -1.91
CBWD1-229ENST00000620292 SPOPLQ6IQ16 392 aa3.12□□□□□ -1.91
CBWD1-229ENST00000620292 LEKR1Q6ZMV7 388 aa3.12□□□□□ -1.91
CBWD1-229ENST00000620292 Q6ZRP5 223 aa3.12□□□□□ -1.91
CBWD1-229ENST00000620292 CLEC20AQ6ZU45 233 aa3.12□□□□□ -1.91
CBWD1-229ENST00000620292 ZNF720Q7Z2F6 126 aa3.12□□□□□ -1.91
CBWD1-229ENST00000620292 ARL14Q8N4G2 192 aa3.12□□□□□ -1.91
CBWD1-229ENST00000620292 LSMEM1Q8N8F7 131 aa3.12□□□□□ -1.91
CBWD1-229ENST00000620292 OR10Q1Q8NGQ4 319 aa3.12□□□□□ -1.91
CBWD1-229ENST00000620292 C9orf43Q8TAL5 461 aaPredicted RBP3.12□□□□□ -1.91
CBWD1-229ENST00000620292 SMAP2Q8WU79 429 aaPredicted RBP3.12□□□□□ -1.91
CBWD1-229ENST00000620292 APOBEC4Q8WW27 367 aaKnown RBP3.12□□□□□ -1.91
CBWD1-229ENST00000620292 ROBO4Q8WZ75 1007 aa3.12□□□□□ -1.91
CBWD1-229ENST00000620292 RAD54LQ92698 747 aa3.12□□□□□ -1.91
CBWD1-229ENST00000620292 SLCO2A1Q92959 643 aa3.12□□□□□ -1.91
CBWD1-229ENST00000620292 HDAC11Q96DB2 347 aa3.12□□□□□ -1.91
CBWD1-229ENST00000620292 ANKRD36BP1Q96IX9 119 aa3.12□□□□□ -1.91
CBWD1-229ENST00000620292 C8orf76Q96K31 380 aa3.12□□□□□ -1.91
CBWD1-229ENST00000620292 C4orf45Q96LM5 186 aa3.12□□□□□ -1.91
CBWD1-229ENST00000620292 USP28Q96RU2 1077 aa3.12□□□□□ -1.91
CBWD1-229ENST00000620292 ATOH8Q96SQ7 321 aa3.12□□□□□ -1.91
CBWD1-229ENST00000620292 MAP3K3Q99759 626 aa3.12□□□□□ -1.91
CBWD1-229ENST00000620292 TXLNGYQ9BZA5 131 aa3.12□□□□□ -1.91
CBWD1-229ENST00000620292 ADNPQ9H2P0 1102 aa3.12□□□□□ -1.91
CBWD1-229ENST00000620292 CSNK1G1Q9HCP0 422 aa3.12□□□□□ -1.91
CBWD1-229ENST00000620292 PLA2G4CQ9UP65 541 aa3.12□□□□□ -1.91
CBWD1-229ENST00000620292 ERVW-1Q9UQF0 538 aa3.12□□□□□ -1.91
CBWD1-229ENST00000620292 NCKAP1Q9Y2A7 1128 aa3.12□□□□□ -1.91
CBWD1-229ENST00000620292 KIF3AQ9Y496 699 aa3.12□□□□□ -1.91
CBWD1-229ENST00000620292 PIKFYVEQ9Y2I7 2098 aa3.12□□□□□ -1.91
CBWD1-229ENST00000620292 TRBV5-5A0A0J9YX44 114 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 A8MXE2 369 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 PRAMEF26H0Y7S4 382 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 AQP9O43315 295 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 ATP6AP2O75787 350 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 SORBS2O94875 1100 aaKnown RBP3.11□□□□□ -1.91
CBWD1-229ENST00000620292 IL1BP01584 269 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 RPLP0P05388 317 aaKnown RBP3.11□□□□□ -1.91
CBWD1-229ENST00000620292 CTSLP07711 333 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 FAM200BP0CF97 657 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 TRIM49P0CI25 452 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 TRIM49CP0CI26 452 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 MYBL1P10243 752 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 SFTPCP11686 197 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 POLR2EP19388 210 aaKnown RBP3.11□□□□□ -1.91
CBWD1-229ENST00000620292 ACHEP22303 614 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 OPRL1P41146 370 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 NDST1P52848 882 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 CYCSP99999 105 aaKnown RBP3.11□□□□□ -1.91
CBWD1-229ENST00000620292 ACSM1Q08AH1 577 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 ORC2Q13416 577 aaPredicted RBP3.11□□□□□ -1.91
CBWD1-229ENST00000620292 TRIM29Q14134 588 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 C16orf72Q14CZ0 275 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 EFTUD2Q15029 972 aaKnown RBP eCLIP3.11□□□□□ -1.91
CBWD1-229ENST00000620292 ZNF74Q16587 644 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 DEFB109BQ30KR1 87 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 KRTAP21-3Q3LHN1 58 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 LACTB2Q53H82 288 aaPredicted RBP3.11□□□□□ -1.91
CBWD1-229ENST00000620292 TCP11X2Q5H9J9 407 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 PIP5KL1Q5T9C9 394 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 BSPRYQ5W0U4 402 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 OR4A47Q6IF82 309 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 KRT80Q6KB66 452 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 RPUSD3Q6P087 351 aaKnown RBP3.11□□□□□ -1.91
CBWD1-229ENST00000620292 Q6ZSR6 202 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 STXBP4Q6ZWJ1 553 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 ABI3BPQ7Z7G0 1075 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 TMEM135Q86UB9 458 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 GTSCR1Q86UQ5 136 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 TRIM69Q86WT6 500 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 CCDC83Q8IWF9 413 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 GPD1LQ8N335 351 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 RASGEF1AQ8N9B8 481 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 Q8N9G6 341 aaPredicted RBP3.11□□□□□ -1.91
CBWD1-229ENST00000620292 OR52K2Q8NGK3 314 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 LMX1AQ8TE12 382 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 GTF3AQ92664 365 aaKnown RBP3.11□□□□□ -1.91
CBWD1-229ENST00000620292 FAM131CQ96AQ9 280 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 VPS33AQ96AX1 596 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 CCDC127Q96BQ5 260 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 DNAJC19Q96DA6 116 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 BMFQ96LC9 184 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 ACCSQ96QU6 501 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 NKX3-1Q99801 234 aaPredicted RBP3.11□□□□□ -1.91
CBWD1-229ENST00000620292 LRRC61Q9BV99 259 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 ST6GALNAC4Q9H4F1 302 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 FBXO44Q9H4M3 255 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 RAB9BQ9NP90 201 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 PANK4Q9NVE7 773 aa3.11□□□□□ -1.91
CBWD1-229ENST00000620292 PAK5Q9P286 719 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms