RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, human

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHMT1-211	ENST00000618902	MARK4	Q96L34	752 aa		4.87	□□□□□ -1.63
SHMT1-211	ENST00000618902	SGCZ	Q96LD1	299 aa		4.87	□□□□□ -1.63
SHMT1-211	ENST00000618902	TEX37	Q96LM6	180 aa		4.87	□□□□□ -1.63
SHMT1-211	ENST00000618902	TSSK3	Q96PN8	268 aa		4.87	□□□□□ -1.63
SHMT1-211	ENST00000618902	ZBTB18	Q99592	522 aa		4.87	□□□□□ -1.63
SHMT1-211	ENST00000618902	DOK1	Q99704	481 aa		4.87	□□□□□ -1.63
SHMT1-211	ENST00000618902	C1orf50	Q9BV19	199 aa		4.87	□□□□□ -1.63
SHMT1-211	ENST00000618902	NUDT9	Q9BW91	350 aa		4.87	□□□□□ -1.63
SHMT1-211	ENST00000618902	HHATL	Q9HCP6	504 aa		4.87	□□□□□ -1.63
SHMT1-211	ENST00000618902	MYNN	Q9NPC7	610 aa		4.87	□□□□□ -1.63
SHMT1-211	ENST00000618902	ADAP2	Q9NPF8	381 aa		4.87	□□□□□ -1.63
SHMT1-211	ENST00000618902	ZNF71	Q9NQZ8	489 aa	Predicted RBP	4.87	□□□□□ -1.63
SHMT1-211	ENST00000618902	PNO1	Q9NRX1	252 aa	Known RBP	4.87	□□□□□ -1.63
SHMT1-211	ENST00000618902	GIN1	Q9NXP7	522 aa		4.87	□□□□□ -1.63
SHMT1-211	ENST00000618902	ASIC5	Q9NY37	505 aa		4.87	□□□□□ -1.63
SHMT1-211	ENST00000618902	SMPD3	Q9NY59	655 aa	Predicted RBP	4.87	□□□□□ -1.63
SHMT1-211	ENST00000618902	STMN3	Q9NZ72	180 aa		4.87	□□□□□ -1.63
SHMT1-211	ENST00000618902	MAP10	Q9P2G4	905 aa		4.87	□□□□□ -1.63
SHMT1-211	ENST00000618902	ZNF639	Q9UID6	485 aa		4.87	□□□□□ -1.63
SHMT1-211	ENST00000618902	PSME2	Q9UL46	239 aa		4.87	□□□□□ -1.63
SHMT1-211	ENST00000618902	ERVK-11	Q9UQG0	969 aa		4.87	□□□□□ -1.63
SHMT1-211	ENST00000618902	PCDHGA10	Q9Y5H3	936 aa		4.87	□□□□□ -1.63
SHMT1-211	ENST00000618902	GPR45	Q9Y5Y3	372 aa		4.87	□□□□□ -1.63
SHMT1-211	ENST00000618902	HSPE1-MOB4	S4R3N1	261 aa		4.87	□□□□□ -1.63
SHMT1-211	ENST00000618902	DCHS2	Q6V1P9	2916 aa		4.87	□□□□□ -1.63
SHMT1-211	ENST00000618902	CREBBP	Q92793	2442 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	MAP1A	P78559	2803 aa	Predicted RBP	4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	GNG14	A0A1W2PPG7	69 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	CLEC18A	A5D8T8	446 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	OR5H15	A6NDH6	313 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	SAGE2P	A6NJ88	616 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	OR6C76	A6NM76	312 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	MYO1G	B0I1T2	1018 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902		C9JVG2	144 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	RGS14	O43566	566 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	MYO1D	O94832	1006 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	SOX30	O94993	753 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	PRSS23	O95084	383 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	LRAT	O95237	230 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	C1QC	P02747	245 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	PRB1	P04280	392 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	IGKV3-11	P04433	115 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	IFI6	P09912	130 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	RAP2A	P10114	183 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	G6PD	P11413	515 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	CPM	P14384	443 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	CD46	P15529	392 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	DDC	P20711	480 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	EFNA1	P20827	205 aa	Predicted RBP	4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	SLC6A2	P23975	617 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	IL12A	P29459	219 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	FEN1	P39748	380 aa	Known RBP	4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	CAPG	P40121	348 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	STT3A	P46977	705 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	ZFP36L2	P47974	494 aa	Known RBP	4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	ALDH9A1	P49189	494 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	XK	P51811	444 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	POLR2J	P52435	117 aa	Known RBP	4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	ARHGDIA	P52565	204 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	SLC7A2	P52569	658 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	PER3	P56645	1201 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	CXCR4	P61073	352 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	TRA2B	P62995	288 aa	Known RBP	4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	PHC1	P78364	1004 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	ARG2	P78540	354 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	CHRNB3	Q05901	458 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	RBPJ	Q06330	500 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	ZNF763	Q0D2J5	394 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	C2orf80	Q0P641	193 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	PDE7A	Q13946	482 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	NFYC	Q13952	458 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	ELOA	Q14241	798 aa	Known RBP	4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	PTGR1	Q14914	329 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	LTB4R	Q15722	352 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	INPP5J	Q15735	1006 aa	Predicted RBP	4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	CEBPE	Q15744	281 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	ATP6AP1	Q15904	470 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	MOG	Q16653	247 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	ZNF468	Q5VIY5	522 aa	Predicted RBP	4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	FAM111B	Q6SJ93	734 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	CLEC18B	Q6UXF7	455 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	ZGRF1	Q86YA3	2104 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	FUNDC1	Q8IVP5	155 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	LIX1	Q8N485	282 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	SIRT6	Q8N6T7	355 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	RBMXL3	Q8N7X1	1067 aa	Known RBP	4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	CLEC18C	Q8NCF0	446 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	C17orf47	Q8NEP4	570 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	B3GNT7	Q8NFL0	401 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	OR7A2P	Q8NGA2	310 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	CDC26	Q8NHZ8	85 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	BRIX1	Q8TDN6	353 aa	Known RBP	4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	ZNF721	Q8TF20	911 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	THAP3	Q8WTV1	239 aa	Predicted RBP	4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	CANT1	Q8WVQ1	401 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	FAR1	Q8WVX9	515 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	LRTOMT	Q8WZ04	291 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	NCLN	Q969V3	563 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	TMEM125	Q96AQ2	219 aa		4.86	□□□□□ -1.63
SHMT1-211	ENST00000618902	CIDEC	Q96AQ7	238 aa	Predicted RBP	4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms