RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 PODNL1Q6PEZ8 512 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 KCTD8Q6ZWB6 473 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 BCDIN3DQ7Z5W3 292 aaKnown RBP7.25□□□□□ -1.25
NEK3-207ENST00000617054 GALNT12Q8IXK2 581 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 MIPOL1Q8TD10 442 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 DPYSL5Q9BPU6 564 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 UCK1Q9HA47 277 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 C8orf4Q9NR00 106 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 IL20RAQ9UHF4 553 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 PCDHGA6Q9Y5G7 932 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 HEMK1Q9Y5R4 338 aaPredicted RBP7.25□□□□□ -1.25
NEK3-207ENST00000617054 GMFGO60234 142 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 IGKV1D-16P01601 117 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 RPLP0P05388 317 aaKnown RBP7.25□□□□□ -1.25
NEK3-207ENST00000617054 H1F0P07305 194 aaKnown RBP7.25□□□□□ -1.25
NEK3-207ENST00000617054 SLC35E2P0CK97 266 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 NR4A1P22736 598 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 CRHBPP24387 322 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 LIMS1P48059 325 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 PSG6Q00889 435 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 MVKQ03426 396 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 CNPY1Q3B7I2 92 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 DCST1Q5T197 706 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 B3GNT8Q7Z7M8 397 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 BBS10Q8TAM1 723 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 FAM81AQ8TBF8 368 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 MOAP1Q96BY2 351 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 TRNT1Q96Q11 434 aaKnown RBP7.25□□□□□ -1.25
NEK3-207ENST00000617054 CTRCQ99895 268 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 FNDC11Q9BVV2 318 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 NRSN2Q9GZP1 204 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 GABARAPL1Q9H0R8 117 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 POLR1BQ9H9Y6 1135 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 APMAPQ9HDC9 416 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 SEMA4GQ9NTN9 838 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 PTGFRNQ9P2B2 879 aa7.25□□□□□ -1.25
NEK3-207ENST00000617054 KIF26BQ2KJY2 2108 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 IGHV3-20A0A0C4DH32 117 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 A0A1B0GTQ1 180 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 TMX2-CTNND1H3BSU7 103 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 SLC16A6O15403 523 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 CTNSO60931 367 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 UGT2B17O75795 530 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 ANGPTL1O95841 491 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 THY1P04216 161 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 HTR1AP08908 422 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 ALOX5P09917 674 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 EMDP50402 254 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 MAP4K2Q12851 820 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 FAM53BQ14153 422 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 GRM7Q14831 915 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 PTGES3Q15185 160 aaKnown RBP7.24□□□□□ -1.25
NEK3-207ENST00000617054 NDUFAF6Q330K2 333 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 WDR5BQ86VZ2 330 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 P3H2Q8IVL5 708 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 NKAIN4Q8IVV8 208 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 SLC30A8Q8IWU4 369 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 ENTHD1Q8IYW4 607 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 IQCF1Q8N6M8 205 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 ADAMTS16Q8TE57 1224 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 RELTQ969Z4 430 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 CTHRC1Q96CG8 243 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 DGAT2Q96PD7 388 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 NAA50Q9GZZ1 169 aaKnown RBP7.24□□□□□ -1.25
NEK3-207ENST00000617054 ERVMER34-1Q9H9K5 563 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 AKIRIN1Q9H9L7 192 aaPredicted RBP7.24□□□□□ -1.25
NEK3-207ENST00000617054 BCL2L10Q9HD36 194 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 C11orf16Q9NQ32 467 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 PRMT8Q9NR22 394 aaPredicted RBP7.24□□□□□ -1.25
NEK3-207ENST00000617054 MAN2C1Q9NTJ4 1040 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 EPHA6Q9UF33 1036 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 NDRG4Q9ULP0 352 aaKnown RBP7.24□□□□□ -1.25
NEK3-207ENST00000617054 HCN4Q9Y3Q4 1203 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 DUXAA6NLW8 204 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 H3BN98 237 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 CLDN4O14493 209 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 NDUFB5O43674 189 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 PLOD3O60568 738 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 CYP7B1O75881 506 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 NR1H2P55055 460 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 TAS2R41P59536 307 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 OCA2Q04671 838 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 HEPHL1Q6MZM0 1159 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 ZNF836Q6ZNA1 936 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 CCDC103Q8IW40 242 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 GPR135Q8IZ08 494 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 OR6C1Q96RD1 312 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 IL4I1Q96RQ9 567 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 NPLQ9BXD5 320 aaPredicted RBP7.24□□□□□ -1.25
NEK3-207ENST00000617054 DGCR6LQ9BY27 220 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 OR8D2Q9GZM6 311 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 PIGUQ9H490 435 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 ZNF556Q9HAH1 456 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 SELENONQ9NZV5 590 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 CNIH4Q9P003 139 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 ERVK-18Q9QC07 812 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 CTSFQ9UBX1 484 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 SLC13A4Q9UKG4 626 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 CDC14AQ9UNH5 594 aa7.24□□□□□ -1.25
NEK3-207ENST00000617054 RNF6Q9Y252 685 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms